RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C SMF3Q12078 473 aaPredicted RBP4.39□□□□□ -1.71
PEX12YMR026C HEL1P36113 551 aa4.38□□□□□ -1.71
PEX12YMR026C CHK1P38147 527 aa4.38□□□□□ -1.71
PEX12YMR026C ZTA1P38230 334 aaKnown RBP4.38□□□□□ -1.71
PEX12YMR026C YJL055WP47044 245 aa4.38□□□□□ -1.71
PEX12YMR026C GPI8P49018 411 aa4.38□□□□□ -1.71
PEX12YMR026C YGR111WP53265 400 aa4.38□□□□□ -1.71
PEX12YMR026C PRP42Q03776 544 aaKnown RBP4.38□□□□□ -1.71
PEX12YMR026C WTM1Q12363 437 aaKnown RBP4.38□□□□□ -1.71
PEX12YMR026C YCL068CP25593 260 aa4.37□□□□□ -1.71
PEX12YMR026C SPR1P32603 445 aa4.37□□□□□ -1.71
PEX12YMR026C RRP1P35178 278 aaPredicted RBP4.37□□□□□ -1.71
PEX12YMR026C GDI1P39958 451 aaKnown RBP4.37□□□□□ -1.71
PEX12YMR026C SEC28P40509 296 aaKnown RBP4.37□□□□□ -1.71
PEX12YMR026C MDE1P47095 244 aa4.37□□□□□ -1.71
PEX12YMR026C YLR152CP54072 576 aa4.37□□□□□ -1.71
PEX12YMR026C STD1Q02794 444 aa4.37□□□□□ -1.71
PEX12YMR026C MMT1Q03218 510 aa4.37□□□□□ -1.71
PEX12YMR026C YMR027WQ04371 470 aa4.37□□□□□ -1.71
PEX12YMR026C IRC25Q07951 179 aa4.37□□□□□ -1.71
PEX12YMR026C UAF30Q08747 228 aa4.37□□□□□ -1.71
PEX12YMR026C RAX1Q08760 435 aa4.37□□□□□ -1.71
PEX12YMR026C STF1P01098 86 aa4.36□□□□□ -1.71
PEX12YMR026C CSE2P33308 149 aa4.36□□□□□ -1.71
PEX12YMR026C OLA1P38219 394 aaKnown RBP4.36□□□□□ -1.71
PEX12YMR026C MEP1P40260 492 aa4.36□□□□□ -1.71
PEX12YMR026C YGL039WP53183 348 aaKnown RBP4.36□□□□□ -1.71
PEX12YMR026C NUP116Q02630 1113 aa4.36□□□□□ -1.71
PEX12YMR026C CCE1Q03702 353 aa4.36□□□□□ -1.71
PEX12YMR026C YDR341CQ05506 607 aaKnown RBP4.36□□□□□ -1.71
PEX12YMR026C RUP1Q12242 671 aa4.36□□□□□ -1.71
PEX12YMR026C TRX1P22217 103 aaKnown RBP4.35□□□□□ -1.71
PEX12YMR026C CYS4P32582 507 aaKnown RBP4.35□□□□□ -1.71
PEX12YMR026C ATP3P38077 311 aaKnown RBP4.35□□□□□ -1.71
PEX12YMR026C SBE22P38814 852 aa4.35□□□□□ -1.71
PEX12YMR026C SIM1P40472 476 aa4.35□□□□□ -1.71
PEX12YMR026C TIS11P47977 285 aa4.35□□□□□ -1.71
PEX12YMR026C BRO1P48582 844 aa4.35□□□□□ -1.71
PEX12YMR026C VPS9P54787 451 aa4.35□□□□□ -1.71
PEX12YMR026C NDE2Q07500 545 aa4.35□□□□□ -1.71
PEX12YMR026C CUE5Q08412 411 aaKnown RBP4.35□□□□□ -1.71
PEX12YMR026C RIM1P32445 135 aaKnown RBP4.34□□□□□ -1.71
PEX12YMR026C PHA2P32452 334 aa4.34□□□□□ -1.71
PEX12YMR026C MRPL10P36520 322 aa4.34□□□□□ -1.71
PEX12YMR026C STN1P38960 494 aa4.34□□□□□ -1.71
PEX12YMR026C YIL029CP40538 142 aa4.34□□□□□ -1.71
PEX12YMR026C YJR085CP47131 105 aaKnown RBP4.34□□□□□ -1.71
PEX12YMR026C SHY1P53266 389 aa4.34□□□□□ -1.71
PEX12YMR026C MTQ1P53944 314 aa4.34□□□□□ -1.71
PEX12YMR026C YLR456WQ06199 204 aa4.34□□□□□ -1.71
PEX12YMR026C NFI1Q12216 726 aa4.34□□□□□ -1.71
PEX12YMR026C RRP7P25368 297 aaPredicted RBP4.33□□□□□ -1.72
PEX12YMR026C HXT1P32465 570 aa4.33□□□□□ -1.72
PEX12YMR026C LTV1P34078 463 aa4.33□□□□□ -1.72
PEX12YMR026C YER079WP40052 210 aaKnown RBP4.33□□□□□ -1.72
PEX12YMR026C BUD27P43573 796 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
PEX12YMR026C DCI1Q08558 271 aa4.33□□□□□ -1.72
PEX12YMR026C GPM3Q12326 303 aa4.33□□□□□ -1.72
PEX12YMR026C NCA2Q12374 616 aa4.33□□□□□ -1.72
PEX12YMR026C FRE6Q12473 712 aa4.33□□□□□ -1.72
PEX12YMR026C NAM2P11325 894 aa4.32□□□□□ -1.72
PEX12YMR026C HSP104P31539 908 aaKnown RBP4.32□□□□□ -1.72
PEX12YMR026C YHR131CP38835 850 aa4.32□□□□□ -1.72
PEX12YMR026C FAD1P38913 306 aa4.32□□□□□ -1.72
PEX12YMR026C COX14P39103 70 aa4.32□□□□□ -1.72
PEX12YMR026C CHS6P40955 746 aa4.32□□□□□ -1.72
PEX12YMR026C TOS3P43637 560 aa4.32□□□□□ -1.72
PEX12YMR026C PIB2P53191 635 aa4.32□□□□□ -1.72
PEX12YMR026C VTI1Q04338 217 aa4.32□□□□□ -1.72
PEX12YMR026C DST1P07273 309 aa4.31□□□□□ -1.72
PEX12YMR026C EXG1P23776 448 aaKnown RBP4.31□□□□□ -1.72
PEX12YMR026C STP2P38704 541 aa4.31□□□□□ -1.72
PEX12YMR026C EFM4P40516 257 aa4.31□□□□□ -1.72
PEX12YMR026C MRM2P53123 320 aa4.31□□□□□ -1.72
PEX12YMR026C MDM36Q06820 579 aa4.31□□□□□ -1.72
PEX12YMR026C PLP2Q12017 286 aa4.31□□□□□ -1.72
PEX12YMR026C IZH2Q12442 317 aa4.31□□□□□ -1.72
PEX12YMR026C CAP2P13517 287 aa4.3□□□□□ -1.72
PEX12YMR026C ALG1P16661 449 aa4.3□□□□□ -1.72
PEX12YMR026C YKL097CP34245 136 aa4.3□□□□□ -1.72
PEX12YMR026C ADA2Q02336 434 aa4.3□□□□□ -1.72
PEX12YMR026C YPL107WQ02873 248 aa4.3□□□□□ -1.72
PEX12YMR026C PRP3Q03338 469 aaPredicted RBP4.3□□□□□ -1.72
PEX12YMR026C AHC1Q12433 566 aa4.3□□□□□ -1.72
PEX12YMR026C CEX1Q12453 761 aa4.3□□□□□ -1.72
PEX12YMR026C CDC21P06785 304 aa4.29□□□□□ -1.72
PEX12YMR026C SMI1P32566 505 aa4.29□□□□□ -1.72
PEX12YMR026C SKN1P33336 771 aa4.29□□□□□ -1.72
PEX12YMR026C INM1P38710 295 aa4.29□□□□□ -1.72
PEX12YMR026C GPI16P38875 610 aa4.29□□□□□ -1.72
PEX12YMR026C AIM10P39965 576 aaKnown RBP4.29□□□□□ -1.72
PEX12YMR026C YGK3Q12222 375 aaPredicted RBP4.29□□□□□ -1.72
PEX12YMR026C MSI1P13712 422 aa4.28□□□□□ -1.72
PEX12YMR026C VMA2P16140 517 aaKnown RBP4.28□□□□□ -1.72
PEX12YMR026C PUP2P32379 260 aa4.28□□□□□ -1.72
PEX12YMR026C MMF1P40185 145 aaKnown RBP4.28□□□□□ -1.72
PEX12YMR026C GAB1P41733 394 aa4.28□□□□□ -1.72
PEX12YMR026C NSE1Q07913 336 aa4.28□□□□□ -1.72
PEX12YMR026C SPE3Q12074 293 aaKnown RBP4.28□□□□□ -1.72
PEX12YMR026C JID1Q12350 301 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms