RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C MNN9P39107 395 aaKnown RBP3.05□□□□□ -1.92
VPS9YML097C SHO1P40073 367 aa3.05□□□□□ -1.92
VPS9YML097C YIR014WP40570 242 aa3.05□□□□□ -1.92
VPS9YML097C LAM5P43560 674 aa3.05□□□□□ -1.92
VPS9YML097C ODC1Q03028 310 aa3.05□□□□□ -1.92
VPS9YML097C PIR3Q03180 325 aa3.05□□□□□ -1.92
VPS9YML097C CUR1Q06469 252 aa3.05□□□□□ -1.92
VPS9YML097C MRPL35Q06678 367 aa3.05□□□□□ -1.92
VPS9YML097C YLR413WQ06689 675 aa3.05□□□□□ -1.92
VPS9YML097C TIM18Q08749 192 aa3.05□□□□□ -1.92
VPS9YML097C YPL199CQ08954 240 aa3.05□□□□□ -1.92
VPS9YML097C RMD5Q12508 421 aa3.05□□□□□ -1.92
VPS9YML097C ATP1P07251 545 aaKnown RBP3.04□□□□□ -1.92
VPS9YML097C RNR2P09938 399 aaKnown RBP3.04□□□□□ -1.92
VPS9YML097C ARF1P11076 181 aaKnown RBP3.04□□□□□ -1.92
VPS9YML097C SLY1P22213 666 aa3.04□□□□□ -1.92
VPS9YML097C DHH1P39517 506 aaKnown RBP3.04□□□□□ -1.92
VPS9YML097C PRP39P39682 629 aaKnown RBP3.04□□□□□ -1.92
VPS9YML097C GCD10P41814 478 aa3.04□□□□□ -1.92
VPS9YML097C TOS2P50078 622 aa3.04□□□□□ -1.92
VPS9YML097C YNR048WP53740 393 aa3.04□□□□□ -1.92
VPS9YML097C ARK1P53974 638 aa3.04□□□□□ -1.92
VPS9YML097C SMP3Q04174 516 aa3.04□□□□□ -1.92
VPS9YML097C STE23Q06010 1027 aa3.04□□□□□ -1.92
VPS9YML097C YAP7Q08182 245 aa3.04□□□□□ -1.92
VPS9YML097C GEP3Q08622 556 aa3.04□□□□□ -1.92
VPS9YML097C NCA2Q12374 616 aa3.04□□□□□ -1.92
VPS9YML097C YIL002W-AQ3E7Z5 69 aa3.04□□□□□ -1.92
VPS9YML097C FSH3Q99369 266 aa3.04□□□□□ -1.92
VPS9YML097C HEM2P05373 342 aa3.03□□□□□ -1.92
VPS9YML097C CLN3P13365 580 aa3.03□□□□□ -1.92
VPS9YML097C ITR1P30605 584 aa3.03□□□□□ -1.92
VPS9YML097C NDC1P32500 655 aa3.03□□□□□ -1.92
VPS9YML097C SWC5P38326 303 aa3.03□□□□□ -1.92
VPS9YML097C VPS45P38932 577 aa3.03□□□□□ -1.92
VPS9YML097C HAT2P39984 401 aa3.03□□□□□ -1.92
VPS9YML097C AIP1P46680 615 aaKnown RBP3.03□□□□□ -1.92
VPS9YML097C AZR1P50080 613 aa3.03□□□□□ -1.92
VPS9YML097C PNC1P53184 216 aaKnown RBP3.03□□□□□ -1.92
VPS9YML097C SPR6Q01684 191 aa3.03□□□□□ -1.92
VPS9YML097C YPL068CQ02749 293 aa3.03□□□□□ -1.92
VPS9YML097C CAB5Q03941 241 aa3.03□□□□□ -1.92
VPS9YML097C FMP42Q04991 504 aa3.03□□□□□ -1.92
VPS9YML097C MSC3Q05812 728 aa3.03□□□□□ -1.92
VPS9YML097C COQ11Q05892 277 aa3.03□□□□□ -1.92
VPS9YML097C YPR078CQ06813 372 aa3.03□□□□□ -1.92
VPS9YML097C SNA4Q07549 140 aa3.03□□□□□ -1.92
VPS9YML097C SRL2Q12020 392 aa3.03□□□□□ -1.92
VPS9YML097C STE2D6VTK4 431 aa3.02□□□□□ -1.93
VPS9YML097C YFL068WP0CX99 160 aa3.02□□□□□ -1.93
VPS9YML097C YLL066W-AP0CY00 160 aa3.02□□□□□ -1.93
VPS9YML097C YLL067W-AP0CY01 160 aa3.02□□□□□ -1.93
VPS9YML097C MTF1P14908 341 aaKnown RBP3.02□□□□□ -1.93
VPS9YML097C PET18P25362 215 aa3.02□□□□□ -1.93
VPS9YML097C KKQ8P36004 724 aa3.02□□□□□ -1.93
VPS9YML097C RTC2P38279 296 aa3.02□□□□□ -1.93
VPS9YML097C ALG8P40351 577 aa3.02□□□□□ -1.93
VPS9YML097C YIL169CP40442 995 aa3.02□□□□□ -1.93
VPS9YML097C LYS12P40495 371 aaKnown RBP3.02□□□□□ -1.93
VPS9YML097C PCI8P40512 444 aa3.02□□□□□ -1.93
VPS9YML097C SPG5P42933 373 aa3.02□□□□□ -1.93
VPS9YML097C TOS3P43637 560 aa3.02□□□□□ -1.93
VPS9YML097C STE24P47154 453 aa3.02□□□□□ -1.93
VPS9YML097C SCW4P53334 386 aaKnown RBP3.02□□□□□ -1.93
VPS9YML097C EGD1Q02642 157 aaKnown RBP3.02□□□□□ -1.93
VPS9YML097C MRP51Q02950 344 aa3.02□□□□□ -1.93
VPS9YML097C BUR2Q05949 395 aa3.02□□□□□ -1.93
VPS9YML097C AIM45Q12480 344 aaKnown RBP3.02□□□□□ -1.93
VPS9YML097C RNA1P11745 407 aaKnown RBP3.01□□□□□ -1.93
VPS9YML097C RIB5P38145 238 aa3.01□□□□□ -1.93
VPS9YML097C ARC40P38328 384 aaKnown RBP3.01□□□□□ -1.93
VPS9YML097C MTC4P38335 694 aaKnown RBP3.01□□□□□ -1.93
VPS9YML097C MET30P39014 640 aa3.01□□□□□ -1.93
VPS9YML097C MST28P39552 234 aa3.01□□□□□ -1.93
VPS9YML097C SIM1P40472 476 aa3.01□□□□□ -1.93
VPS9YML097C DIM1P41819 318 aaKnown RBP3.01□□□□□ -1.93
VPS9YML097C SSN8P47821 323 aa3.01□□□□□ -1.93
VPS9YML097C RET3P53600 189 aa3.01□□□□□ -1.93
VPS9YML097C GOR1P53839 350 aa3.01□□□□□ -1.93
VPS9YML097C CCE1Q03702 353 aa3.01□□□□□ -1.93
VPS9YML097C SNX3Q08826 162 aaKnown RBP3.01□□□□□ -1.93
VPS9YML097C YOP1Q12402 180 aa3.01□□□□□ -1.93
VPS9YML097C APC2Q12440 853 aa3.01□□□□□ -1.93
VPS9YML097C RPL20AP0CX23 172 aaKnown RBP3□□□□□ -1.93
VPS9YML097C RPL20BP0CX24 172 aaPredicted RBP3□□□□□ -1.93
VPS9YML097C CKI1P20485 582 aa3□□□□□ -1.93
VPS9YML097C CIN8P27895 1000 aa3□□□□□ -1.93
VPS9YML097C ATS1P31386 333 aa3□□□□□ -1.93
VPS9YML097C YPS1P32329 569 aa3□□□□□ -1.93
VPS9YML097C ATO2P32907 282 aa3□□□□□ -1.93
VPS9YML097C PAD1P33751 242 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
VPS9YML097C ASK1P35734 292 aa3□□□□□ -1.93
VPS9YML097C YIL152WP40455 235 aa3□□□□□ -1.93
VPS9YML097C OST1P41543 476 aaKnown RBP3□□□□□ -1.93
VPS9YML097C SAD1P43589 448 aa3□□□□□ -1.93
VPS9YML097C YFR016CP43597 1233 aaKnown RBP3□□□□□ -1.93
VPS9YML097C RRT5P43607 289 aa3□□□□□ -1.93
VPS9YML097C YGR117CP53270 476 aa3□□□□□ -1.93
VPS9YML097C DBP6P53734 629 aaKnown RBP3□□□□□ -1.93
VPS9YML097C RGS2Q99188 309 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms