RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W BET5Q03630 159 aa2.99□□□□□ -1.93
CST9YLR394W PPM1Q04081 328 aa2.99□□□□□ -1.93
CST9YLR394W URH1Q04179 340 aa2.99□□□□□ -1.93
CST9YLR394W PBA1Q05778 276 aa2.99□□□□□ -1.93
CST9YLR394W YLR456WQ06199 204 aa2.99□□□□□ -1.93
CST9YLR394W TSR1Q07381 788 aaKnown RBP2.99□□□□□ -1.93
CST9YLR394W IMA2Q08295 589 aa2.99□□□□□ -1.93
CST9YLR394W SGT1Q08446 395 aa2.99□□□□□ -1.93
CST9YLR394W NUP188P52593 1655 aaKnown RBP2.98□□□□□ -1.93
CST9YLR394W ARG4P04076 463 aaPredicted RBP2.98□□□□□ -1.93
CST9YLR394W CYC3P06182 269 aa2.98□□□□□ -1.93
CST9YLR394W RPS8AP0CX39 200 aaKnown RBP2.98□□□□□ -1.93
CST9YLR394W RPS8BP0CX40 200 aaKnown RBP2.98□□□□□ -1.93
CST9YLR394W ZTA1P38230 334 aaKnown RBP2.98□□□□□ -1.93
CST9YLR394W STP2P38704 541 aa2.98□□□□□ -1.93
CST9YLR394W YPS6P40583 537 aa2.98□□□□□ -1.93
CST9YLR394W SSN8P47821 323 aa2.98□□□□□ -1.93
CST9YLR394W YGR111WP53265 400 aa2.98□□□□□ -1.93
CST9YLR394W YMR181CQ03231 154 aa2.98□□□□□ -1.93
CST9YLR394W SNX3Q08826 162 aaKnown RBP2.98□□□□□ -1.93
CST9YLR394W RSA1Q08932 381 aa2.98□□□□□ -1.93
CST9YLR394W SRL2Q12020 392 aa2.98□□□□□ -1.93
CST9YLR394W YLR108CQ12259 485 aa2.98□□□□□ -1.93
CST9YLR394W MTR10Q99189 972 aa2.98□□□□□ -1.93
CST9YLR394W SPT15P13393 240 aaKnown RBP2.97□□□□□ -1.93
CST9YLR394W SPS22P25380 463 aa2.97□□□□□ -1.93
CST9YLR394W YKL097CP34245 136 aa2.97□□□□□ -1.93
CST9YLR394W LRP1P38801 184 aaKnown RBP2.97□□□□□ -1.93
CST9YLR394W SIM1P40472 476 aa2.97□□□□□ -1.93
CST9YLR394W PRM5P40476 318 aa2.97□□□□□ -1.93
CST9YLR394W NCA3P46955 337 aa2.97□□□□□ -1.93
CST9YLR394W AZR1P50080 613 aa2.97□□□□□ -1.93
CST9YLR394W OAZ1Q02803 292 aa2.97□□□□□ -1.93
CST9YLR394W RPN9Q04062 393 aaKnown RBP2.97□□□□□ -1.93
CST9YLR394W REX4Q08237 289 aa2.97□□□□□ -1.93
CST9YLR394W CDC60P26637 1090 aaKnown RBP2.96□□□□□ -1.94
CST9YLR394W KKQ8P36004 724 aa2.96□□□□□ -1.94
CST9YLR394W SWD3P38123 315 aa2.96□□□□□ -1.94
CST9YLR394W NDT80P38830 627 aa2.96□□□□□ -1.94
CST9YLR394W MTC6P38849 526 aa2.96□□□□□ -1.94
CST9YLR394W EFM4P40516 257 aa2.96□□□□□ -1.94
CST9YLR394W REE1P40893 198 aa2.96□□□□□ -1.94
CST9YLR394W RRN11Q04712 507 aa2.96□□□□□ -1.94
CST9YLR394W BUG1Q12191 341 aa2.96□□□□□ -1.94
CST9YLR394W ATG34Q12292 412 aa2.96□□□□□ -1.94
CST9YLR394W TY1B-NL2Q99337 1749 aaKnown RBP2.96□□□□□ -1.94
CST9YLR394W HAP1P0CE41 1502 aa2.95□□□□□ -1.94
CST9YLR394W CAT8P39113 1433 aa2.95□□□□□ -1.94
CST9YLR394W TRP1P00912 224 aa2.95□□□□□ -1.94
CST9YLR394W YBL059WP34224 193 aa2.95□□□□□ -1.94
CST9YLR394W SWH1P35845 1188 aa2.95□□□□□ -1.94
CST9YLR394W MSG5P38590 489 aa2.95□□□□□ -1.94
CST9YLR394W GPI16P38875 610 aa2.95□□□□□ -1.94
CST9YLR394W FAD1P38913 306 aa2.95□□□□□ -1.94
CST9YLR394W STN1P38960 494 aa2.95□□□□□ -1.94
CST9YLR394W JLP2P40206 208 aa2.95□□□□□ -1.94
CST9YLR394W GAT2P40209 560 aa2.95□□□□□ -1.94
CST9YLR394W LCB2P40970 561 aa2.95□□□□□ -1.94
CST9YLR394W WWM1P43582 211 aaKnown RBP2.95□□□□□ -1.94
CST9YLR394W PRP42Q03776 544 aaKnown RBP2.95□□□□□ -1.94
CST9YLR394W GYL1Q04322 720 aa2.95□□□□□ -1.94
CST9YLR394W SPE3Q12074 293 aaKnown RBP2.95□□□□□ -1.94
CST9YLR394W VMR1P38735 1592 aa2.95□□□□□ -1.94
CST9YLR394W GEA1P47102 1408 aaPredicted RBP2.95□□□□□ -1.94
CST9YLR394W ADH2P00331 348 aaKnown RBP2.94□□□□□ -1.94
CST9YLR394W NFT1P0CE68 1218 aa2.94□□□□□ -1.94
CST9YLR394W CLN3P13365 580 aa2.94□□□□□ -1.94
CST9YLR394W DEG1P31115 442 aaKnown RBP2.94□□□□□ -1.94
CST9YLR394W KAR9P32526 644 aa2.94□□□□□ -1.94
CST9YLR394W PXA2P34230 853 aa2.94□□□□□ -1.94
CST9YLR394W CIK1Q01649 594 aa2.94□□□□□ -1.94
CST9YLR394W AEP3Q12089 606 aa2.94□□□□□ -1.94
CST9YLR394W MED2Q12124 431 aa2.94□□□□□ -1.94
CST9YLR394W HHF1P02309 103 aaKnown RBP2.93□□□□□ -1.94
CST9YLR394W RPL1AP0CX43 217 aaKnown RBP2.93□□□□□ -1.94
CST9YLR394W RPL1BP0CX44 217 aaKnown RBP2.93□□□□□ -1.94
CST9YLR394W MUD1P32605 298 aaKnown RBP2.93□□□□□ -1.94
CST9YLR394W SDH3P33421 198 aa2.93□□□□□ -1.94
CST9YLR394W LTV1P34078 463 aa2.93□□□□□ -1.94
CST9YLR394W PCF11P39081 626 aaPredicted RBP2.93□□□□□ -1.94
CST9YLR394W BUD27P43573 796 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
CST9YLR394W COS1P53822 381 aa2.93□□□□□ -1.94
CST9YLR394W SMA2Q04658 369 aa2.93□□□□□ -1.94
CST9YLR394W BCH1Q05029 724 aa2.93□□□□□ -1.94
CST9YLR394W YDR341CQ05506 607 aaKnown RBP2.93□□□□□ -1.94
CST9YLR394W RRP9Q06506 573 aaKnown RBP2.93□□□□□ -1.94
CST9YLR394W DCI1Q08558 271 aa2.93□□□□□ -1.94
CST9YLR394W RPN5Q12250 445 aaKnown RBP2.93□□□□□ -1.94
CST9YLR394W ALG1P16661 449 aa2.93□□□□□ -1.94
CST9YLR394W MNE1P24720 663 aa2.93□□□□□ -1.94
CST9YLR394W RRP7P25368 297 aaPredicted RBP2.93□□□□□ -1.94
CST9YLR394W RIM1P32445 135 aaKnown RBP2.93□□□□□ -1.94
CST9YLR394W PTH1P38876 190 aaKnown RBP2.93□□□□□ -1.94
CST9YLR394W YGR210CP42942 411 aa2.93□□□□□ -1.94
CST9YLR394W SFH5P47008 294 aa2.93□□□□□ -1.94
CST9YLR394W TOS2P50078 622 aa2.93□□□□□ -1.94
CST9YLR394W AHC1Q12433 566 aa2.93□□□□□ -1.94
CST9YLR394W PAR32Q12515 295 aaKnown RBP2.93□□□□□ -1.94
CST9YLR394W ISY1P21374 235 aaPredicted RBP2.92□□□□□ -1.94
CST9YLR394W PAD1P33751 242 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms