RNA–Protein interactions for RNA: YLR243W

GPN3, Transcript of Putative GTPase with a role in biogenesis of RNA pol II and polIII, yeast

Gene GPN3, Length 819 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GPN3	YLR243W	YLR456W	Q06199	204 aa		3.22	□□□□□ -1.89
GPN3	YLR243W	CUE5	Q08412	411 aa	Known RBP	3.22	□□□□□ -1.89
GPN3	YLR243W	UAF30	Q08747	228 aa		3.22	□□□□□ -1.89
GPN3	YLR243W	PLP2	Q12017	286 aa		3.22	□□□□□ -1.89
GPN3	YLR243W	CAP2	P13517	287 aa		3.21	□□□□□ -1.9
GPN3	YLR243W	MIG3	P39943	394 aa		3.21	□□□□□ -1.9
GPN3	YLR243W	PRP42	Q03776	544 aa	Known RBP	3.21	□□□□□ -1.9
GPN3	YLR243W	SNU66	Q12420	587 aa	Predicted RBP	3.21	□□□□□ -1.9
GPN3	YLR243W	ISA2	Q12425	185 aa		3.21	□□□□□ -1.9
GPN3	YLR243W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
GPN3	YLR243W	DBF4	P32325	704 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	PRS1	P32895	427 aa	Known RBP	3.2	□□□□□ -1.9
GPN3	YLR243W	RRP1	P35178	278 aa	Predicted RBP	3.2	□□□□□ -1.9
GPN3	YLR243W	YHK8	P38776	514 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	BAT1	P38891	393 aa	Known RBP	3.2	□□□□□ -1.9
GPN3	YLR243W	YER079W	P40052	210 aa	Known RBP	3.2	□□□□□ -1.9
GPN3	YLR243W	EGT2	P42835	1041 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	LCB3	P47013	409 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	BNS1	P50084	137 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	MDG1	P53885	366 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	MMT1	Q03218	510 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	RIF2	Q06208	395 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	MDM36	Q06820	579 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	SMF3	Q12078	473 aa	Predicted RBP	3.2	□□□□□ -1.9
GPN3	YLR243W	MED2	Q12124	431 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	NCA2	Q12374	616 aa		3.2	□□□□□ -1.9
GPN3	YLR243W	MSI1	P13712	422 aa		3.19	□□□□□ -1.9
GPN3	YLR243W	CYS4	P32582	507 aa	Known RBP	3.19	□□□□□ -1.9
GPN3	YLR243W	COX14	P39103	70 aa		3.19	□□□□□ -1.9
GPN3	YLR243W	PTI1	P39927	425 aa	Predicted RBP	3.19	□□□□□ -1.9
GPN3	YLR243W	TOS3	P43637	560 aa		3.19	□□□□□ -1.9
GPN3	YLR243W	MTQ1	P53944	314 aa		3.19	□□□□□ -1.9
GPN3	YLR243W	TDA1	Q03533	586 aa		3.19	□□□□□ -1.9
GPN3	YLR243W	MFG1	Q07684	458 aa		3.19	□□□□□ -1.9
GPN3	YLR243W	YGK3	Q12222	375 aa	Predicted RBP	3.19	□□□□□ -1.9
GPN3	YLR243W	GPM3	Q12326	303 aa		3.19	□□□□□ -1.9
GPN3	YLR243W	DST1	P07273	309 aa		3.18	□□□□□ -1.9
GPN3	YLR243W	SSC1	P0CS90	654 aa	Known RBP	3.18	□□□□□ -1.9
GPN3	YLR243W	NAT1	P12945	854 aa	Known RBP	3.18	□□□□□ -1.9
GPN3	YLR243W	RIM1	P32445	135 aa	Known RBP	3.18	□□□□□ -1.9
GPN3	YLR243W	RTC2	P38279	296 aa		3.18	□□□□□ -1.9
GPN3	YLR243W	YGR111W	P53265	400 aa		3.18	□□□□□ -1.9
GPN3	YLR243W	ADA2	Q02336	434 aa		3.18	□□□□□ -1.9
GPN3	YLR243W	AEP3	Q12089	606 aa		3.18	□□□□□ -1.9
GPN3	YLR243W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
GPN3	YLR243W	SKN1	P33336	771 aa		3.17	□□□□□ -1.9
GPN3	YLR243W	ATP3	P38077	311 aa	Known RBP	3.17	□□□□□ -1.9
GPN3	YLR243W	OLA1	P38219	394 aa	Known RBP	3.17	□□□□□ -1.9
GPN3	YLR243W	INM1	P38710	295 aa		3.17	□□□□□ -1.9
GPN3	YLR243W	YDR341C	Q05506	607 aa	Known RBP	3.17	□□□□□ -1.9
GPN3	YLR243W	RNH203	Q12338	110 aa		3.17	□□□□□ -1.9
GPN3	YLR243W	OPI3	P05375	206 aa		3.16	□□□□□ -1.9
GPN3	YLR243W	CDC21	P06785	304 aa		3.16	□□□□□ -1.9
GPN3	YLR243W	VMA8	P32610	256 aa	Known RBP	3.16	□□□□□ -1.9
GPN3	YLR243W	ATG18	P43601	500 aa		3.16	□□□□□ -1.9
GPN3	YLR243W	BIR1	P47134	954 aa		3.16	□□□□□ -1.9
GPN3	YLR243W	PMT5	P52867	743 aa		3.16	□□□□□ -1.9
GPN3	YLR243W	MST27	P53176	234 aa		3.16	□□□□□ -1.9
GPN3	YLR243W	CRH1	P53301	507 aa		3.16	□□□□□ -1.9
GPN3	YLR243W	RTN1	Q04947	295 aa	Known RBP	3.16	□□□□□ -1.9
GPN3	YLR243W	ALG1	P16661	449 aa		3.15	□□□□□ -1.91
GPN3	YLR243W	ANR2	P36090	516 aa	Predicted RBP	3.15	□□□□□ -1.91
GPN3	YLR243W	MRP21	P38175	177 aa		3.15	□□□□□ -1.91
GPN3	YLR243W	OXA1	P39952	402 aa		3.15	□□□□□ -1.91
GPN3	YLR243W	MMF1	P40185	145 aa	Known RBP	3.15	□□□□□ -1.91
GPN3	YLR243W	PGU1	P47180	361 aa		3.15	□□□□□ -1.91
GPN3	YLR243W	ROG1	P53118	685 aa		3.15	□□□□□ -1.91
GPN3	YLR243W	JID1	Q12350	301 aa		3.15	□□□□□ -1.91
GPN3	YLR243W	YDL012C	Q12489	107 aa		3.15	□□□□□ -1.91
GPN3	YLR243W	YCR024C-B	Q3E7Z8	88 aa		3.15	□□□□□ -1.91
GPN3	YLR243W	AAT2	P23542	418 aa	Known RBP	3.14	□□□□□ -1.91
GPN3	YLR243W	YEF1	P32622	495 aa		3.14	□□□□□ -1.91
GPN3	YLR243W	SPT10	P35208	640 aa		3.14	□□□□□ -1.91
GPN3	YLR243W	QDR3	P38227	689 aa		3.14	□□□□□ -1.91
GPN3	YLR243W	SRP72	P38688	640 aa	Known RBP	3.14	□□□□□ -1.91
GPN3	YLR243W	LIP2	Q06005	328 aa		3.14	□□□□□ -1.91
GPN3	YLR243W	DCI1	Q08558	271 aa		3.14	□□□□□ -1.91
GPN3	YLR243W	RUP1	Q12242	671 aa		3.14	□□□□□ -1.91
GPN3	YLR243W	EAF3	Q12432	401 aa		3.14	□□□□□ -1.91
GPN3	YLR243W	SMC6	Q12749	1114 aa		3.14	□□□□□ -1.91
GPN3	YLR243W	FAB1	P34756	2278 aa		3.14	□□□□□ -1.91
GPN3	YLR243W	POM152	P39685	1337 aa		3.14	□□□□□ -1.91
GPN3	YLR243W	LTV1	P34078	463 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	YFR057W	P43625	151 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	AIM24	P47127	394 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	ABM1	P47146	123 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	PIB2	P53191	635 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	RRN9	P53437	365 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	MEH1	Q02205	184 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	YMR102C	Q03177	834 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	GYL1	Q04322	720 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	ECM7	Q06200	448 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	NDE2	Q07500	545 aa		3.13	□□□□□ -1.91
GPN3	YLR243W	ATP1	P07251	545 aa	Known RBP	3.12	□□□□□ -1.91
GPN3	YLR243W	RPB5	P20434	215 aa		3.12	□□□□□ -1.91
GPN3	YLR243W	HSP104	P31539	908 aa	Known RBP	3.12	□□□□□ -1.91
GPN3	YLR243W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
GPN3	YLR243W	YSC83	P32792	385 aa		3.12	□□□□□ -1.91
GPN3	YLR243W	GPX2	P38143	162 aa		3.12	□□□□□ -1.91
GPN3	YLR243W	YER186C	P40101	306 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms