RNA–Protein interactions for RNA: YLR107W

REX3, Transcript of RNA exonuclease, yeast

Gene REX3, Length 1,215 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REX3	YLR107W	COX14	P39103	70 aa		4.2	□□□□□ -1.74
REX3	YLR107W	YIL029C	P40538	142 aa		4.2	□□□□□ -1.74
REX3	YLR107W	MTQ1	P53944	314 aa		4.2	□□□□□ -1.74
REX3	YLR107W	NDE2	Q07500	545 aa		4.2	□□□□□ -1.74
REX3	YLR107W	HSP104	P31539	908 aa	Known RBP	4.19	□□□□□ -1.74
REX3	YLR107W	RIM1	P32445	135 aa	Known RBP	4.19	□□□□□ -1.74
REX3	YLR107W	STP2	P38704	541 aa		4.19	□□□□□ -1.74
REX3	YLR107W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
REX3	YLR107W	TOS3	P43637	560 aa		4.19	□□□□□ -1.74
REX3	YLR107W	CIK1	Q01649	594 aa		4.19	□□□□□ -1.74
REX3	YLR107W	PLP2	Q12017	286 aa		4.19	□□□□□ -1.74
REX3	YLR107W	GPM3	Q12326	303 aa		4.19	□□□□□ -1.74
REX3	YLR107W	NCA2	Q12374	616 aa		4.19	□□□□□ -1.74
REX3	YLR107W	AHC1	Q12433	566 aa		4.19	□□□□□ -1.74
REX3	YLR107W	CEX1	Q12453	761 aa		4.19	□□□□□ -1.74
REX3	YLR107W	DST1	P07273	309 aa		4.18	□□□□□ -1.74
REX3	YLR107W	NAM2	P11325	894 aa		4.18	□□□□□ -1.74
REX3	YLR107W	EXG1	P23776	448 aa	Known RBP	4.18	□□□□□ -1.74
REX3	YLR107W	YKL097C	P34245	136 aa		4.18	□□□□□ -1.74
REX3	YLR107W	MRPL10	P36520	322 aa		4.18	□□□□□ -1.74
REX3	YLR107W	YHR131C	P38835	850 aa		4.18	□□□□□ -1.74
REX3	YLR107W	AIM10	P39965	576 aa	Known RBP	4.18	□□□□□ -1.74
REX3	YLR107W	YER079W	P40052	210 aa	Known RBP	4.18	□□□□□ -1.74
REX3	YLR107W	MRM2	P53123	320 aa		4.18	□□□□□ -1.74
REX3	YLR107W	DCI1	Q08558	271 aa		4.18	□□□□□ -1.74
REX3	YLR107W	IZH2	Q12442	317 aa		4.18	□□□□□ -1.74
REX3	YLR107W	CAP2	P13517	287 aa		4.17	□□□□□ -1.74
REX3	YLR107W	INM1	P38710	295 aa		4.17	□□□□□ -1.74
REX3	YLR107W	GPI16	P38875	610 aa		4.17	□□□□□ -1.74
REX3	YLR107W	GAB1	P41733	394 aa		4.17	□□□□□ -1.74
REX3	YLR107W	COS1	P53822	381 aa		4.17	□□□□□ -1.74
REX3	YLR107W	SOD1	P00445	154 aa	Known RBP	4.16	□□□□□ -1.74
REX3	YLR107W	CDC21	P06785	304 aa		4.16	□□□□□ -1.74
REX3	YLR107W	ALG1	P16661	449 aa		4.16	□□□□□ -1.74
REX3	YLR107W	DPH5	P32469	300 aa	Predicted RBP	4.16	□□□□□ -1.74
REX3	YLR107W	UTP18	P40362	594 aa	Predicted RBP	4.16	□□□□□ -1.74
REX3	YLR107W	TSA2	Q04120	196 aa		4.16	□□□□□ -1.74
REX3	YLR107W	BSC6	Q08280	497 aa		4.16	□□□□□ -1.74
REX3	YLR107W	CUE5	Q08412	411 aa	Known RBP	4.16	□□□□□ -1.74
REX3	YLR107W	YGK3	Q12222	375 aa	Predicted RBP	4.16	□□□□□ -1.74
REX3	YLR107W	JID1	Q12350	301 aa		4.16	□□□□□ -1.74
REX3	YLR107W	MSI1	P13712	422 aa		4.15	□□□□□ -1.75
REX3	YLR107W	NUP2	P32499	720 aa		4.15	□□□□□ -1.75
REX3	YLR107W	PRS1	P32895	427 aa	Known RBP	4.15	□□□□□ -1.75
REX3	YLR107W	SKN1	P33336	771 aa		4.15	□□□□□ -1.75
REX3	YLR107W	MMF1	P40185	145 aa	Known RBP	4.15	□□□□□ -1.75
REX3	YLR107W	PIB2	P53191	635 aa		4.15	□□□□□ -1.75
REX3	YLR107W	RIF2	Q06208	395 aa		4.15	□□□□□ -1.75
REX3	YLR107W	NSE1	Q07913	336 aa		4.15	□□□□□ -1.75
REX3	YLR107W	RPB5	P20434	215 aa		4.14	□□□□□ -1.75
REX3	YLR107W	PXA2	P34230	853 aa		4.14	□□□□□ -1.75
REX3	YLR107W	SPE3	Q12074	293 aa	Known RBP	4.14	□□□□□ -1.75
REX3	YLR107W	ATP1	P07251	545 aa	Known RBP	4.13	□□□□□ -1.75
REX3	YLR107W	YEF1	P32622	495 aa		4.13	□□□□□ -1.75
REX3	YLR107W	YHK8	P38776	514 aa		4.13	□□□□□ -1.75
REX3	YLR107W	LCB3	P47013	409 aa		4.13	□□□□□ -1.75
REX3	YLR107W	ADA2	Q02336	434 aa		4.13	□□□□□ -1.75
REX3	YLR107W	PRP3	Q03338	469 aa	Predicted RBP	4.13	□□□□□ -1.75
REX3	YLR107W	RTN1	Q04947	295 aa	Known RBP	4.13	□□□□□ -1.75
REX3	YLR107W	NDL1	Q06568	189 aa		4.13	□□□□□ -1.75
REX3	YLR107W	CMS1	Q07897	291 aa	Known RBP	4.13	□□□□□ -1.75
REX3	YLR107W	SMF3	Q12078	473 aa	Predicted RBP	4.13	□□□□□ -1.75
REX3	YLR107W	RNH203	Q12338	110 aa		4.13	□□□□□ -1.75
REX3	YLR107W	POM152	P39685	1337 aa		4.13	□□□□□ -1.75
REX3	YLR107W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	RIP-Chip
REX3	YLR107W	PCL1	P24867	279 aa		4.12	□□□□□ -1.75
REX3	YLR107W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
REX3	YLR107W	QDR3	P38227	689 aa		4.12	□□□□□ -1.75
REX3	YLR107W	MIG3	P39943	394 aa		4.12	□□□□□ -1.75
REX3	YLR107W	MST27	P53176	234 aa		4.12	□□□□□ -1.75
REX3	YLR107W	YGR117C	P53270	476 aa		4.12	□□□□□ -1.75
REX3	YLR107W	HAL1	Q01766	294 aa		4.12	□□□□□ -1.75
REX3	YLR107W	YMR102C	Q03177	834 aa		4.12	□□□□□ -1.75
REX3	YLR107W	TDA1	Q03533	586 aa		4.12	□□□□□ -1.75
REX3	YLR107W	GYL1	Q04322	720 aa		4.12	□□□□□ -1.75
REX3	YLR107W	LOT6	Q07923	191 aa		4.12	□□□□□ -1.75
REX3	YLR107W	SMC5	Q08204	1093 aa		4.12	□□□□□ -1.75
REX3	YLR107W	SSC1	P0CS90	654 aa	Known RBP	4.11	□□□□□ -1.75
REX3	YLR107W	PHO91	P27514	894 aa		4.11	□□□□□ -1.75
REX3	YLR107W	SKT5	P34226	696 aa		4.11	□□□□□ -1.75
REX3	YLR107W	RTC2	P38279	296 aa		4.11	□□□□□ -1.75
REX3	YLR107W	PTI1	P39927	425 aa	Predicted RBP	4.11	□□□□□ -1.75
REX3	YLR107W	YFR057W	P43625	151 aa		4.11	□□□□□ -1.75
REX3	YLR107W	AIM24	P47127	394 aa		4.11	□□□□□ -1.75
REX3	YLR107W	BIR1	P47134	954 aa		4.11	□□□□□ -1.75
REX3	YLR107W	STE24	P47154	453 aa		4.11	□□□□□ -1.75
REX3	YLR107W	TOS2	P50078	622 aa		4.11	□□□□□ -1.75
REX3	YLR107W	ROG1	P53118	685 aa		4.11	□□□□□ -1.75
REX3	YLR107W	RSC1	P53236	928 aa		4.11	□□□□□ -1.75
REX3	YLR107W	RRP46	P53256	223 aa	Predicted RBP	4.11	□□□□□ -1.75
REX3	YLR107W	VPS9	P54787	451 aa		4.11	□□□□□ -1.75
REX3	YLR107W	RPN5	Q12250	445 aa	Known RBP	4.11	□□□□□ -1.75
REX3	YLR107W	EAF3	Q12432	401 aa		4.11	□□□□□ -1.75
REX3	YLR107W	PDE2	P06776	526 aa		4.1	□□□□□ -1.75
REX3	YLR107W	NAT1	P12945	854 aa	Known RBP	4.1	□□□□□ -1.75
REX3	YLR107W	COX13	P32799	129 aa		4.1	□□□□□ -1.75
REX3	YLR107W	DED81	P38707	554 aa	Known RBP	4.1	□□□□□ -1.75
REX3	YLR107W	LRP1	P38801	184 aa	Known RBP	4.1	□□□□□ -1.75
REX3	YLR107W	MAM33	P40513	266 aa		4.1	□□□□□ -1.75
REX3	YLR107W	LCB2	P40970	561 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms