RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE1	YLR007W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
NSE1	YLR007W	YKL071W	P36086	256 aa		4.19	□□□□□ -1.74
NSE1	YLR007W	ROT2	P38138	954 aa		4.19	□□□□□ -1.74
NSE1	YLR007W	ARC40	P38328	384 aa	Known RBP	4.19	□□□□□ -1.74
NSE1	YLR007W	SCC4	P40090	624 aa		4.19	□□□□□ -1.74
NSE1	YLR007W	FMC1	P40491	155 aa		4.19	□□□□□ -1.74
NSE1	YLR007W	RIB4	P50861	169 aa	Predicted RBP	4.19	□□□□□ -1.74
NSE1	YLR007W	YNL247W	P53852	767 aa	Known RBP	4.19	□□□□□ -1.74
NSE1	YLR007W	YNL234W	P53857	426 aa		4.19	□□□□□ -1.74
NSE1	YLR007W	IPK1	Q06667	281 aa		4.19	□□□□□ -1.74
NSE1	YLR007W	PEX27	Q08580	376 aa		4.19	□□□□□ -1.74
NSE1	YLR007W	RKM1	Q08961	583 aa	Predicted RBP	4.19	□□□□□ -1.74
NSE1	YLR007W	GLE1	Q12315	538 aa		4.19	□□□□□ -1.74
NSE1	YLR007W	RAV1	P47104	1357 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	SRB4	P32569	687 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	ATO2	P32907	282 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	SPC97	P38863	823 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	ALP1	P38971	573 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	PCF11	P39081	626 aa	Predicted RBP	4.18	□□□□□ -1.74
NSE1	YLR007W	YHB1	P39676	399 aa	Known RBP	4.18	□□□□□ -1.74
NSE1	YLR007W	UTP18	P40362	594 aa	Predicted RBP	4.18	□□□□□ -1.74
NSE1	YLR007W	YIR014W	P40570	242 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	SNG1	P46950	547 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	ATG27	P46989	271 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	YGR117C	P53270	476 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	DUG3	P53871	357 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	YVH1	Q02256	364 aa	Known RBP	4.18	□□□□□ -1.74
NSE1	YLR007W	YOR012W	Q12351	137 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	FMP16	Q12497	93 aa		4.18	□□□□□ -1.74
NSE1	YLR007W	ARG4	P04076	463 aa	Predicted RBP	4.17	□□□□□ -1.74
NSE1	YLR007W	RAD52	P06778	471 aa	Known RBP	4.17	□□□□□ -1.74
NSE1	YLR007W	KRE2	P27809	442 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	ARO4	P32449	370 aa	Known RBP	4.17	□□□□□ -1.74
NSE1	YLR007W	RAD23	P32628	398 aa	Known RBP	4.17	□□□□□ -1.74
NSE1	YLR007W	CYM1	P32898	989 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	RPC25	P35718	212 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	SNL1	P40548	159 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	TES1	P41903	349 aa	Known RBP	4.17	□□□□□ -1.74
NSE1	YLR007W	TOS3	P43637	560 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	LOH1	P47055	219 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	TIM21	P53220	239 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	YNL260C	P53846	198 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	MPS1	P54199	764 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	REX2	P54964	269 aa	Known RBP	4.17	□□□□□ -1.74
NSE1	YLR007W	STD1	Q02794	444 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	BNA7	Q04066	261 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	SHS1	Q07657	551 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	DSE3	Q08729	430 aa		4.17	□□□□□ -1.74
NSE1	YLR007W	IKI3	Q06706	1349 aa	Known RBP	4.17	□□□□□ -1.74
NSE1	YLR007W	COR1	P07256	457 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	DAL81	P21657	970 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	HXT2	P23585	541 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	RHB1	P25378	209 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	PSO2	P30620	661 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	YPS1	P32329	569 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
NSE1	YLR007W	REC114	P32841	428 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	ECT1	P33412	323 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	YPK3	P38070	525 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	MAL32	P38158	584 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	SPP381	P38282	291 aa	Predicted RBP	4.16	□□□□□ -1.74
NSE1	YLR007W	PCA1	P38360	1216 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	YHR210C	P38893	341 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	MBB1	P39534	108 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	PRP39	P39682	629 aa	Known RBP	4.16	□□□□□ -1.74
NSE1	YLR007W	YND1	P40009	630 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	PCL6	P40038	420 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	OTU1	P43558	301 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	MAL12	P53341	584 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	KTR6	P54070	446 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	SRL4	Q03085	281 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	CTL1	Q03220	320 aa	Known RBP	4.16	□□□□□ -1.74
NSE1	YLR007W	RSN1	Q03516	953 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	TAF12	Q03761	539 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	BSC6	Q08280	497 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	YOR365C	Q08844	703 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	SPO24	Q3E752	67 aa		4.16	□□□□□ -1.74
NSE1	YLR007W	RIP1	P08067	215 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	YLL053C	P0CD98	152 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	NFT1	P0CE68	1218 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	BAR1	P12630	587 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	YUR1	P26725	428 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	PRR1	P28708	518 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	ATP11	P32453	318 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	SKG6	P32900	734 aa	Predicted RBP	4.15	□□□□□ -1.75
NSE1	YLR007W	BUD2	P33314	1104 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	MSN2	P33748	704 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	PHD1	P36093	366 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	DUG2	P38149	878 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	RRN10	P38204	145 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	RTC2	P38279	296 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	PAC11	P40960	533 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	AZF1	P41696	914 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	GUF1	P46943	645 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	DIB1	Q06819	143 aa	Predicted RBP	4.15	□□□□□ -1.75
NSE1	YLR007W	SYO1	Q07395	620 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	YOS9	Q99220	542 aa		4.15	□□□□□ -1.75
NSE1	YLR007W	YSR3	P23501	404 aa		4.14	□□□□□ -1.75
NSE1	YLR007W	YSC83	P32792	385 aa		4.14	□□□□□ -1.75
NSE1	YLR007W	YKL023W	P36103	277 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms