RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W ARO2P28777 376 aaKnown RBP3.83□□□□□ -1.8
PTM1YKL039W PAD1P33751 242 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
PTM1YKL039W STB6P36085 766 aa3.83□□□□□ -1.8
PTM1YKL039W BTN2P53286 410 aa3.83□□□□□ -1.8
PTM1YKL039W RRP45Q05636 305 aaKnown RBP3.83□□□□□ -1.8
PTM1YKL039W TIM18Q08749 192 aa3.83□□□□□ -1.8
PTM1YKL039W SFI1Q12369 946 aa3.83□□□□□ -1.8
PTM1YKL039W ISN1Q99312 450 aa3.83□□□□□ -1.8
PTM1YKL039W SPS22P25380 463 aa3.82□□□□□ -1.8
PTM1YKL039W RIB5P38145 238 aa3.82□□□□□ -1.8
PTM1YKL039W YBR137WP38276 179 aa3.82□□□□□ -1.8
PTM1YKL039W FAA2P39518 744 aa3.82□□□□□ -1.8
PTM1YKL039W WWM1P43582 211 aaKnown RBP3.82□□□□□ -1.8
PTM1YKL039W YNR048WP53740 393 aa3.82□□□□□ -1.8
PTM1YKL039W FRE4P53746 719 aa3.82□□□□□ -1.8
PTM1YKL039W YMR155WQ03795 547 aa3.82□□□□□ -1.8
PTM1YKL039W VAM3Q12241 283 aa3.82□□□□□ -1.8
PTM1YKL039W YDR034W-BQ6Q5X2 51 aa3.82□□□□□ -1.8
PTM1YKL039W PRM5P40476 318 aa3.81□□□□□ -1.8
PTM1YKL039W RPS0BP46654 252 aaKnown RBP3.81□□□□□ -1.8
PTM1YKL039W NCA3P46955 337 aa3.81□□□□□ -1.8
PTM1YKL039W YJR011CP47086 261 aaPredicted RBP3.81□□□□□ -1.8
PTM1YKL039W HXT11P54862 567 aa3.81□□□□□ -1.8
PTM1YKL039W ORT1Q12375 292 aa3.81□□□□□ -1.8
PTM1YKL039W ILV5P06168 395 aaKnown RBP3.8□□□□□ -1.8
PTM1YKL039W RNA1P11745 407 aaKnown RBP3.8□□□□□ -1.8
PTM1YKL039W ISY1P21374 235 aaPredicted RBP3.8□□□□□ -1.8
PTM1YKL039W LDB16P25587 256 aa3.8□□□□□ -1.8
PTM1YKL039W BEM1P29366 551 aa3.8□□□□□ -1.8
PTM1YKL039W YME2P32843 850 aa3.8□□□□□ -1.8
PTM1YKL039W SDH3P33421 198 aa3.8□□□□□ -1.8
PTM1YKL039W JNM1P36224 373 aa3.8□□□□□ -1.8
PTM1YKL039W TCD1P38756 429 aa3.8□□□□□ -1.8
PTM1YKL039W YHR131CP38835 850 aa3.8□□□□□ -1.8
PTM1YKL039W LYS1P38998 373 aaRIP-Chip data3.8□□□□□ -1.8 RIP-Chip
PTM1YKL039W SHE10P53075 577 aa3.8□□□□□ -1.8
PTM1YKL039W SGT1Q08446 395 aa3.8□□□□□ -1.8
PTM1YKL039W RKM1Q08961 583 aaPredicted RBP3.8□□□□□ -1.8
PTM1YKL039W SNU66Q12420 587 aaPredicted RBP3.8□□□□□ -1.8
PTM1YKL039W YEL045CP32616 141 aa3.8□□□□□ -1.8
PTM1YKL039W PIM1P36775 1133 aa3.8□□□□□ -1.8
PTM1YKL039W SWD3P38123 315 aa3.8□□□□□ -1.8
PTM1YKL039W PRE5P40302 234 aaKnown RBP3.8□□□□□ -1.8
PTM1YKL039W COS5P47187 383 aa3.8□□□□□ -1.8
PTM1YKL039W YMR181CQ03231 154 aa3.8□□□□□ -1.8
PTM1YKL039W COS7Q07788 383 aa3.8□□□□□ -1.8
PTM1YKL039W RMD5Q12508 421 aa3.8□□□□□ -1.8
PTM1YKL039W ARG4P04076 463 aaPredicted RBP3.79□□□□□ -1.8
PTM1YKL039W FUR1P18562 216 aaKnown RBP3.79□□□□□ -1.8
PTM1YKL039W LSB5P25369 354 aa3.79□□□□□ -1.8
PTM1YKL039W RHB1P25378 209 aa3.79□□□□□ -1.8
PTM1YKL039W HIR2P32480 875 aa3.79□□□□□ -1.8
PTM1YKL039W MRPL4P36517 319 aa3.79□□□□□ -1.8
PTM1YKL039W NTC20P38302 140 aaPredicted RBP3.79□□□□□ -1.8
PTM1YKL039W PTH1P38876 190 aaKnown RBP3.79□□□□□ -1.8
PTM1YKL039W RSM25P40496 264 aa3.79□□□□□ -1.8
PTM1YKL039W HMS2P47175 358 aa3.79□□□□□ -1.8
PTM1YKL039W RSC1P53236 928 aa3.79□□□□□ -1.8
PTM1YKL039W PPM1Q04081 328 aa3.79□□□□□ -1.8
PTM1YKL039W TEF1P02994 458 aaKnown RBP3.78□□□□□ -1.8
PTM1YKL039W CLN3P13365 580 aa3.78□□□□□ -1.8
PTM1YKL039W SLY1P22213 666 aa3.78□□□□□ -1.8
PTM1YKL039W CTR86P25355 563 aa3.78□□□□□ -1.8
PTM1YKL039W SOR1P35497 357 aaKnown RBP3.78□□□□□ -1.8
PTM1YKL039W BYE1P36106 594 aa3.78□□□□□ -1.8
PTM1YKL039W YBL028CP38202 106 aa3.78□□□□□ -1.8
PTM1YKL039W MTC6P38849 526 aa3.78□□□□□ -1.8
PTM1YKL039W YGL138CP53122 345 aa3.78□□□□□ -1.8
PTM1YKL039W SOR2Q07786 357 aa3.78□□□□□ -1.8
PTM1YKL039W HSP42Q12329 375 aa3.78□□□□□ -1.8
PTM1YKL039W HRT3Q12347 344 aa3.78□□□□□ -1.8
PTM1YKL039W NUM1Q00402 2748 aa3.78□□□□□ -1.8
PTM1YKL039W VMA2P16140 517 aaKnown RBP3.77□□□□□ -1.81
PTM1YKL039W SKO1Q02100 647 aa3.77□□□□□ -1.81
PTM1YKL039W KAP120Q02932 1032 aa3.77□□□□□ -1.81
PTM1YKL039W HER2Q03557 464 aa3.77□□□□□ -1.81
PTM1YKL039W ROY1Q04847 553 aa3.77□□□□□ -1.81
PTM1YKL039W RRG7Q08774 242 aaPredicted RBP3.77□□□□□ -1.81
PTM1YKL039W SNX3Q08826 162 aaKnown RBP3.77□□□□□ -1.81
PTM1YKL039W TRP1P00912 224 aa3.76□□□□□ -1.81
PTM1YKL039W SCEIP03882 235 aa3.76□□□□□ -1.81
PTM1YKL039W YCR051WP25631 222 aa3.76□□□□□ -1.81
PTM1YKL039W PTK1P36002 662 aaPredicted RBP3.76□□□□□ -1.81
PTM1YKL039W KKQ8P36004 724 aa3.76□□□□□ -1.81
PTM1YKL039W HST1P53685 503 aa3.76□□□□□ -1.81
PTM1YKL039W BNI5P53890 448 aaKnown RBP3.76□□□□□ -1.81
PTM1YKL039W SKI7Q08491 747 aaPredicted RBP3.76□□□□□ -1.81
PTM1YKL039W RAD50P12753 1312 aa3.76□□□□□ -1.81
PTM1YKL039W ADH2P00331 348 aaKnown RBP3.76□□□□□ -1.81
PTM1YKL039W PET123P17558 318 aa3.76□□□□□ -1.81
PTM1YKL039W REC107P21651 314 aa3.76□□□□□ -1.81
PTM1YKL039W LTV1P34078 463 aa3.76□□□□□ -1.81
PTM1YKL039W MSG5P38590 489 aa3.76□□□□□ -1.81
PTM1YKL039W MTM1P53320 366 aa3.76□□□□□ -1.81
PTM1YKL039W GPI15P53961 229 aa3.76□□□□□ -1.81
PTM1YKL039W RSN1Q03516 953 aa3.76□□□□□ -1.81
PTM1YKL039W TAF12Q03761 539 aa3.76□□□□□ -1.81
PTM1YKL039W DON1Q05610 365 aa3.76□□□□□ -1.81
PTM1YKL039W HRI1Q05905 244 aaKnown RBP3.76□□□□□ -1.81
PTM1YKL039W REX4Q08237 289 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms