RNA–Protein interactions for RNA: YJL099W

CHS6, Transcript of Member of the ChAPs (Chs5p-Arf1p-binding proteins) family, yeast

Gene CHS6, Length 2,241 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHS6	YJL099W	YCL068C	P25593	260 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	RIM1	P32445	135 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	RAD5	P32849	1169 aa	Predicted RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	MPE1	P35728	441 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	DOA1	P36037	715 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	ZTA1	P38230	334 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	GAT2	P40209	560 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	PAN6	P40459	309 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	VHS2	P40463	436 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	HAC1	P41546	238 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	YFR057W	P43625	151 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	TOM22	P49334	152 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	PHB2	P50085	310 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	CLD1	P53264	445 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	CWC22	P53333	577 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	TRM112	P53738	135 aa	Predicted RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	HAL1	Q01766	294 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	ADA2	Q02336	434 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	YPL107W	Q02873	248 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	YDR541C	Q03049	344 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	PRP42	Q03776	544 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	YDR131C	Q03899	556 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	ECM11	Q04110	302 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	MDM30	Q05930	598 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	MMR1	Q06324	491 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	NSE1	Q07913	336 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	SMC5	Q08204	1093 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	RAX1	Q08760	435 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	HMS1	Q12398	434 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	RRD2	Q12461	358 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	RMD5	Q12508	421 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	SRN2	Q99176	213 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	RPL6B	P05739	176 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	ARF1	P11076	181 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	RPB5	P20434	215 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	ERV1	P27882	189 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	NIP1	P32497	812 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	SPT10	P35208	640 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	KAP104	P38217	918 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	INM1	P38710	295 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	GDI1	P39958	451 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	JLP2	P40206	208 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	YPS6	P40583	537 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	PAC11	P40960	533 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	TCB2	P48231	1178 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	MKC7	P53379	596 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	OCA2	P53949	197 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	HXT11	P54862	567 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	RPL6A	Q02326	176 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	NUP116	Q02630	1113 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	YMR102C	Q03177	834 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	PRP3	Q03338	469 aa	Predicted RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	CCE1	Q03702	353 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	GYL1	Q04322	720 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	MDM36	Q06820	579 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	MCH1	Q07376	486 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	CMS1	Q07897	291 aa	Known RBP	0.72	□□□□□ -2.29
CHS6	YJL099W	AAD15	Q08361	143 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	YRM1	Q12340	786 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	NCA2	Q12374	616 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	ERP4	Q12450	207 aa		0.72	□□□□□ -2.29
CHS6	YJL099W	POM152	P39685	1337 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	TPK3	P05986	398 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	ILV5	P06168	395 aa	Known RBP	0.71	□□□□□ -2.3
CHS6	YJL099W	NFT1	P0CE68	1218 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	MSI1	P13712	422 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	MRPL8	P22353	238 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	AAT2	P23542	418 aa	Known RBP	0.71	□□□□□ -2.3
CHS6	YJL099W	GEX1	P25596	615 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	PHO91	P27514	894 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	SKN1	P33336	771 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	SKT5	P34226	696 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	MRPL10	P36520	322 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	ASC1	P38011	319 aa	Known RBP	0.71	□□□□□ -2.3
CHS6	YJL099W	YNL208W	P40159	199 aa	Known RBP	0.71	□□□□□ -2.3
CHS6	YJL099W	JEM1	P40358	645 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	ATM1	P40416	690 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	TOS3	P43637	560 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	AIM24	P47127	394 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	MRM2	P53123	320 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	YGR117C	P53270	476 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	YGR250C	P53316	781 aa	Known RBP	0.71	□□□□□ -2.3
CHS6	YJL099W	MTM1	P53320	366 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	SPR6	Q01684	191 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	RCF1	Q03713	159 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	RTN1	Q04947	295 aa	Known RBP	0.71	□□□□□ -2.3
CHS6	YJL099W	YLR345W	Q06137	509 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	YLR456W	Q06199	204 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	YGK3	Q12222	375 aa	Predicted RBP	0.71	□□□□□ -2.3
CHS6	YJL099W	GPM3	Q12326	303 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	HIF1	Q12373	385 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	PCL9	Q12477	304 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	MEX67	Q99257	599 aa	Known RBP	0.71	□□□□□ -2.3
CHS6	YJL099W	PSK1	P31374	1356 aa		0.71	□□□□□ -2.3
CHS6	YJL099W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.7	□□□□□ -2.3	not detected
CHS6	YJL099W	IMA3	P0CW40	589 aa		0.7	□□□□□ -2.3
CHS6	YJL099W	IMA4	P0CW41	589 aa		0.7	□□□□□ -2.3
CHS6	YJL099W	ALG1	P16661	449 aa		0.7	□□□□□ -2.3
CHS6	YJL099W	MNE1	P24720	663 aa		0.7	□□□□□ -2.3
CHS6	YJL099W	ITR1	P30605	584 aa		0.7	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms