RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C MER1P16523 270 aa3.27□□□□□ -1.89
MSM1YGR171C CTR86P25355 563 aa3.27□□□□□ -1.89
MSM1YGR171C YCR100CP25606 316 aa3.27□□□□□ -1.89
MSM1YGR171C SIP2P34164 415 aaKnown RBP3.27□□□□□ -1.89
MSM1YGR171C YCR041WP37265 110 aa3.27□□□□□ -1.89
MSM1YGR171C RIM2P38127 377 aa3.27□□□□□ -1.89
MSM1YGR171C PET100P38958 111 aa3.27□□□□□ -1.89
MSM1YGR171C LYS1P38998 373 aaRIP-Chip data3.27□□□□□ -1.89not detected
MSM1YGR171C END3P39013 349 aa3.27□□□□□ -1.89
MSM1YGR171C YND1P40009 630 aa3.27□□□□□ -1.89
MSM1YGR171C DIM1P41819 318 aaKnown RBP3.27□□□□□ -1.89
MSM1YGR171C GCN20P43535 752 aaKnown RBP3.27□□□□□ -1.89
MSM1YGR171C MPS2P53159 387 aa3.27□□□□□ -1.89
MSM1YGR171C GIM3P53900 129 aa3.27□□□□□ -1.89
MSM1YGR171C NUP53Q03790 475 aa3.27□□□□□ -1.89
MSM1YGR171C IPK1Q06667 281 aa3.27□□□□□ -1.89
MSM1YGR171C YPR078CQ06813 372 aa3.27□□□□□ -1.89
MSM1YGR171C CHS1P08004 1131 aa3.26□□□□□ -1.89
MSM1YGR171C SAR1P20606 190 aaKnown RBP3.26□□□□□ -1.89
MSM1YGR171C RAD57P25301 460 aa3.26□□□□□ -1.89
MSM1YGR171C HMX1P32339 317 aa3.26□□□□□ -1.89
MSM1YGR171C NRP1P32770 719 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
MSM1YGR171C YSC83P32792 385 aa3.26□□□□□ -1.89
MSM1YGR171C COT1P32798 439 aa3.26□□□□□ -1.89
MSM1YGR171C QDR3P38227 689 aa3.26□□□□□ -1.89
MSM1YGR171C DED81P38707 554 aaKnown RBP3.26□□□□□ -1.89
MSM1YGR171C INM1P38710 295 aa3.26□□□□□ -1.89
MSM1YGR171C LIN1P38852 340 aaPredicted RBP3.26□□□□□ -1.89
MSM1YGR171C YAL037WP39728 267 aa3.26□□□□□ -1.89
MSM1YGR171C AIM20P40451 204 aa3.26□□□□□ -1.89
MSM1YGR171C VOA1P53262 265 aa3.26□□□□□ -1.89
MSM1YGR171C CSI1Q04368 295 aa3.26□□□□□ -1.89
MSM1YGR171C SMA2Q04658 369 aa3.26□□□□□ -1.89
MSM1YGR171C BCP1Q06338 283 aa3.26□□□□□ -1.89
MSM1YGR171C VPS63O13549 108 aa3.25□□□□□ -1.89
MSM1YGR171C SCH9P11792 824 aaKnown RBP3.25□□□□□ -1.89
MSM1YGR171C PET123P17558 318 aa3.25□□□□□ -1.89
MSM1YGR171C MSG5P38590 489 aa3.25□□□□□ -1.89
MSM1YGR171C YER079WP40052 210 aaKnown RBP3.25□□□□□ -1.89
MSM1YGR171C PAC11P40960 533 aa3.25□□□□□ -1.89
MSM1YGR171C GWT1P47026 490 aa3.25□□□□□ -1.89
MSM1YGR171C IKS1P47042 667 aa3.25□□□□□ -1.89
MSM1YGR171C FRE4P53746 719 aa3.25□□□□□ -1.89
MSM1YGR171C YNL146WP53906 100 aa3.25□□□□□ -1.89
MSM1YGR171C GPI15P53961 229 aa3.25□□□□□ -1.89
MSM1YGR171C UTP6Q02354 440 aaKnown RBP3.25□□□□□ -1.89
MSM1YGR171C INP2Q03824 705 aa3.25□□□□□ -1.89
MSM1YGR171C URH1Q04179 340 aa3.25□□□□□ -1.89
MSM1YGR171C SNT309Q06091 175 aaPredicted RBP3.25□□□□□ -1.89
MSM1YGR171C GRS2Q06817 618 aa3.25□□□□□ -1.89
MSM1YGR171C ATG34Q12292 412 aa3.25□□□□□ -1.89
MSM1YGR171C ORT1Q12375 292 aa3.25□□□□□ -1.89
MSM1YGR171C RPL24AP04449 155 aaKnown RBP3.24□□□□□ -1.89
MSM1YGR171C DST1P07273 309 aa3.24□□□□□ -1.89
MSM1YGR171C THR4P16120 514 aaKnown RBP3.24□□□□□ -1.89
MSM1YGR171C RPL5P26321 297 aaKnown RBP3.24□□□□□ -1.89
MSM1YGR171C DPH5P32469 300 aaPredicted RBP3.24□□□□□ -1.89
MSM1YGR171C YKT6P36015 200 aaKnown RBP3.24□□□□□ -1.89
MSM1YGR171C GTO1P48239 356 aa3.24□□□□□ -1.89
MSM1YGR171C ODC1Q03028 310 aa3.24□□□□□ -1.89
MSM1YGR171C RRN11Q04712 507 aa3.24□□□□□ -1.89
MSM1YGR171C YMR310CQ04867 317 aaPredicted RBP3.24□□□□□ -1.89
MSM1YGR171C CUR1Q06469 252 aa3.24□□□□□ -1.89
MSM1YGR171C SKI7Q08491 747 aaPredicted RBP3.24□□□□□ -1.89
MSM1YGR171C SSA3P09435 649 aaKnown RBP3.24□□□□□ -1.89
MSM1YGR171C GAL3P13045 520 aa3.24□□□□□ -1.89
MSM1YGR171C CDC23P16522 626 aa3.24□□□□□ -1.89
MSM1YGR171C UGA1P17649 471 aa3.24□□□□□ -1.89
MSM1YGR171C PTR2P32901 601 aa3.24□□□□□ -1.89
MSM1YGR171C ARC19P33204 171 aaKnown RBP3.24□□□□□ -1.89
MSM1YGR171C YMR262WP38430 313 aa3.24□□□□□ -1.89
MSM1YGR171C RTT107P38850 1070 aa3.24□□□□□ -1.89
MSM1YGR171C LOC1P43586 204 aaPredicted RBP3.24□□□□□ -1.89
MSM1YGR171C PHB2P50085 310 aa3.24□□□□□ -1.89
MSM1YGR171C PNC1P53184 216 aaKnown RBP3.24□□□□□ -1.89
MSM1YGR171C MMT1Q03218 510 aa3.24□□□□□ -1.89
MSM1YGR171C RSN1Q03516 953 aa3.24□□□□□ -1.89
MSM1YGR171C ARR1Q06596 294 aa3.24□□□□□ -1.89
MSM1YGR171C SGT1Q08446 395 aa3.24□□□□□ -1.89
MSM1YGR171C CLP1Q08685 445 aaPredicted RBP3.24□□□□□ -1.89
MSM1YGR171C YPR022CQ12139 1133 aa3.24□□□□□ -1.89
MSM1YGR171C RBD2Q12270 262 aa3.24□□□□□ -1.89
MSM1YGR171C GLE1Q12315 538 aa3.24□□□□□ -1.89
MSM1YGR171C ARG4P04076 463 aaPredicted RBP3.23□□□□□ -1.89
MSM1YGR171C IMA3P0CW40 589 aa3.23□□□□□ -1.89
MSM1YGR171C IMA4P0CW41 589 aa3.23□□□□□ -1.89
MSM1YGR171C LSB5P25369 354 aa3.23□□□□□ -1.89
MSM1YGR171C SEC1P30619 724 aaKnown RBP3.23□□□□□ -1.89
MSM1YGR171C SPP381P38282 291 aaPredicted RBP3.23□□□□□ -1.89
MSM1YGR171C SWC5P38326 303 aa3.23□□□□□ -1.89
MSM1YGR171C STP2P38704 541 aa3.23□□□□□ -1.89
MSM1YGR171C YJL070CP40361 888 aa3.23□□□□□ -1.89
MSM1YGR171C RTT102P53330 157 aa3.23□□□□□ -1.89
MSM1YGR171C STD1Q02794 444 aa3.23□□□□□ -1.89
MSM1YGR171C SPO19Q03029 223 aa3.23□□□□□ -1.89
MSM1YGR171C BET5Q03630 159 aa3.23□□□□□ -1.89
MSM1YGR171C APC4Q04601 652 aa3.23□□□□□ -1.89
MSM1YGR171C SHS1Q07657 551 aa3.23□□□□□ -1.89
MSM1YGR171C IMA2Q08295 589 aa3.23□□□□□ -1.89
MSM1YGR171C MUM3Q08750 479 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms