RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W VHS2P40463 436 aa1.16□□□□□ -2.22
CUL3YGR003W CAK1P43568 368 aaPredicted RBP1.16□□□□□ -2.22
CUL3YGR003W ATG18P43601 500 aa1.16□□□□□ -2.22
CUL3YGR003W ABM1P47146 123 aa1.16□□□□□ -2.22
CUL3YGR003W CRH1P53301 507 aa1.16□□□□□ -2.22
CUL3YGR003W STD1Q02794 444 aa1.16□□□□□ -2.22
CUL3YGR003W AIM32Q04689 311 aa1.16□□□□□ -2.22
CUL3YGR003W TPT1Q12272 230 aaKnown RBP1.16□□□□□ -2.22
CUL3YGR003W NAM2P11325 894 aa1.16□□□□□ -2.22
CUL3YGR003W CLC1P17891 233 aa1.16□□□□□ -2.22
CUL3YGR003W ZTA1P38230 334 aaKnown RBP1.16□□□□□ -2.22
CUL3YGR003W FAD1P38913 306 aa1.16□□□□□ -2.22
CUL3YGR003W ZIM17P42844 174 aa1.16□□□□□ -2.22
CUL3YGR003W TOS3P43637 560 aa1.16□□□□□ -2.22
CUL3YGR003W SRB7P47822 140 aa1.16□□□□□ -2.22
CUL3YGR003W MDM36Q06820 579 aa1.16□□□□□ -2.22
CUL3YGR003W UAF30Q08747 228 aa1.16□□□□□ -2.22
CUL3YGR003W YGK3Q12222 375 aaPredicted RBP1.16□□□□□ -2.22
CUL3YGR003W HSP42Q12329 375 aa1.16□□□□□ -2.22
CUL3YGR003W NCA2Q12374 616 aa1.16□□□□□ -2.22
CUL3YGR003W MTR10Q99189 972 aa1.16□□□□□ -2.22
CUL3YGR003W ADH1P00330 348 aaKnown RBP1.15□□□□□ -2.23
CUL3YGR003W OPI3P05375 206 aa1.15□□□□□ -2.23
CUL3YGR003W SRV2P17555 526 aaKnown RBP1.15□□□□□ -2.23
CUL3YGR003W TFB1P32776 642 aa1.15□□□□□ -2.23
CUL3YGR003W YBR056WP38081 501 aa1.15□□□□□ -2.23
CUL3YGR003W OXA1P39952 402 aa1.15□□□□□ -2.23
CUL3YGR003W YIL029CP40538 142 aa1.15□□□□□ -2.23
CUL3YGR003W BIR1P47134 954 aa1.15□□□□□ -2.23
CUL3YGR003W ADA2Q02336 434 aa1.15□□□□□ -2.23
CUL3YGR003W RPN9Q04062 393 aaKnown RBP1.15□□□□□ -2.23
CUL3YGR003W YLR456WQ06199 204 aa1.15□□□□□ -2.23
CUL3YGR003W VPS54Q12071 889 aa1.15□□□□□ -2.23
CUL3YGR003W MCT1Q12283 360 aa1.15□□□□□ -2.23
CUL3YGR003W RNH203Q12338 110 aa1.15□□□□□ -2.23
CUL3YGR003W RRP1P35178 278 aaPredicted RBP1.15□□□□□ -2.23
CUL3YGR003W SPT10P35208 640 aa1.15□□□□□ -2.23
CUL3YGR003W NAB3P38996 802 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
CUL3YGR003W ALD5P40047 520 aaKnown RBP1.15□□□□□ -2.23
CUL3YGR003W MST27P53176 234 aa1.15□□□□□ -2.23
CUL3YGR003W RRN9P53437 365 aa1.15□□□□□ -2.23
CUL3YGR003W HOT1Q03213 719 aa1.15□□□□□ -2.23
CUL3YGR003W RTN1Q04947 295 aaKnown RBP1.15□□□□□ -2.23
CUL3YGR003W YOR376WQ08900 122 aa1.15□□□□□ -2.23
CUL3YGR003W SFI1Q12369 946 aa1.15□□□□□ -2.23
CUL3YGR003W YCR024C-BQ3E7Z8 88 aa1.15□□□□□ -2.23
CUL3YGR003W CPR2P23285 205 aa1.14□□□□□ -2.23
CUL3YGR003W CYS4P32582 507 aaKnown RBP1.14□□□□□ -2.23
CUL3YGR003W SKN1P33336 771 aa1.14□□□□□ -2.23
CUL3YGR003W GPX2P38143 162 aa1.14□□□□□ -2.23
CUL3YGR003W COX14P39103 70 aa1.14□□□□□ -2.23
CUL3YGR003W YER079WP40052 210 aaKnown RBP1.14□□□□□ -2.23
CUL3YGR003W MTQ1P53944 314 aa1.14□□□□□ -2.23
CUL3YGR003W MRPS16Q02608 121 aa1.14□□□□□ -2.23
CUL3YGR003W VPS72Q03388 795 aa1.14□□□□□ -2.23
CUL3YGR003W PRP42Q03776 544 aaKnown RBP1.14□□□□□ -2.23
CUL3YGR003W YET2Q04210 160 aa1.14□□□□□ -2.23
CUL3YGR003W LIP2Q06005 328 aa1.14□□□□□ -2.23
CUL3YGR003W ECM7Q06200 448 aa1.14□□□□□ -2.23
CUL3YGR003W SNU66Q12420 587 aaPredicted RBP1.14□□□□□ -2.23
CUL3YGR003W COX4P04037 155 aa1.13□□□□□ -2.23
CUL3YGR003W ALG1P16661 449 aa1.13□□□□□ -2.23
CUL3YGR003W AAT2P23542 418 aaKnown RBP1.13□□□□□ -2.23
CUL3YGR003W CHA1P25379 360 aaKnown RBP1.13□□□□□ -2.23
CUL3YGR003W TOA2P32774 122 aa1.13□□□□□ -2.23
CUL3YGR003W SEO1P39709 593 aa1.13□□□□□ -2.23
CUL3YGR003W KEG1P43614 200 aa1.13□□□□□ -2.23
CUL3YGR003W AIM24P47127 394 aa1.13□□□□□ -2.23
CUL3YGR003W RMT2Q03305 412 aa1.13□□□□□ -2.23
CUL3YGR003W YDR341CQ05506 607 aaKnown RBP1.13□□□□□ -2.23
CUL3YGR003W YHC1Q05900 231 aaKnown RBP1.13□□□□□ -2.23
CUL3YGR003W GPM3Q12326 303 aa1.13□□□□□ -2.23
CUL3YGR003W JID1Q12350 301 aa1.13□□□□□ -2.23
CUL3YGR003W DST1P07273 309 aa1.13□□□□□ -2.23
CUL3YGR003W HOM3P10869 527 aa1.13□□□□□ -2.23
CUL3YGR003W REC107P21651 314 aa1.13□□□□□ -2.23
CUL3YGR003W RIM1P32445 135 aaKnown RBP1.13□□□□□ -2.23
CUL3YGR003W YSC83P32792 385 aa1.13□□□□□ -2.23
CUL3YGR003W MPE1P35728 441 aaKnown RBP1.13□□□□□ -2.23
CUL3YGR003W QDR3P38227 689 aa1.13□□□□□ -2.23
CUL3YGR003W INM1P38710 295 aa1.13□□□□□ -2.23
CUL3YGR003W TIM17P39515 158 aa1.13□□□□□ -2.23
CUL3YGR003W STE24P47154 453 aa1.13□□□□□ -2.23
CUL3YGR003W ROG1P53118 685 aa1.13□□□□□ -2.23
CUL3YGR003W MEH1Q02205 184 aa1.13□□□□□ -2.23
CUL3YGR003W YMR102CQ03177 834 aa1.13□□□□□ -2.23
CUL3YGR003W MMT1Q03218 510 aa1.13□□□□□ -2.23
CUL3YGR003W DNL4Q08387 944 aaPredicted RBP1.13□□□□□ -2.23
CUL3YGR003W BUG1Q12191 341 aa1.13□□□□□ -2.23
CUL3YGR003W NAG1Q8TGN9 163 aa1.13□□□□□ -2.23
CUL3YGR003W POM152P39685 1337 aa1.12□□□□□ -2.23
CUL3YGR003W CDC21P06785 304 aa1.12□□□□□ -2.23
CUL3YGR003W PRB1P09232 635 aa1.12□□□□□ -2.23
CUL3YGR003W RPL12AP0CX53 165 aaKnown RBP1.12□□□□□ -2.23
CUL3YGR003W RPL12BP0CX54 165 aa1.12□□□□□ -2.23
CUL3YGR003W RPB5P20434 215 aa1.12□□□□□ -2.23
CUL3YGR003W MSP1P28737 362 aa1.12□□□□□ -2.23
CUL3YGR003W YEF1P32622 495 aa1.12□□□□□ -2.23
CUL3YGR003W JNM1P36224 373 aa1.12□□□□□ -2.23
CUL3YGR003W YHR177WP38867 453 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms