RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W MPS1P54199 764 aa5.06□□□□□ -1.6
PDE1YGL248W ARG5,6Q01217 863 aa5.06□□□□□ -1.6
PDE1YGL248W YPR147CQ06522 304 aaKnown RBP5.06□□□□□ -1.6
PDE1YGL248W YPD1Q07688 167 aa5.06□□□□□ -1.6
PDE1YGL248W YOR365CQ08844 703 aa5.06□□□□□ -1.6
PDE1YGL248W RSA1Q08932 381 aa5.06□□□□□ -1.6
PDE1YGL248W BAG7Q12128 409 aa5.06□□□□□ -1.6
PDE1YGL248W PER33Q12144 273 aa5.06□□□□□ -1.6
PDE1YGL248W RRI1Q12468 440 aa5.06□□□□□ -1.6
PDE1YGL248W GDH1P07262 454 aaKnown RBP5.05□□□□□ -1.6
PDE1YGL248W YBR121C-AP0C5L4 52 aa5.05□□□□□ -1.6
PDE1YGL248W GPI12P23797 304 aa5.05□□□□□ -1.6
PDE1YGL248W PUT3P25502 979 aaPredicted RBP5.05□□□□□ -1.6
PDE1YGL248W ERG9P29704 444 aa5.05□□□□□ -1.6
PDE1YGL248W SKT5P34226 696 aa5.05□□□□□ -1.6
PDE1YGL248W MNN2P38069 597 aa5.05□□□□□ -1.6
PDE1YGL248W HMT1P38074 348 aa5.05□□□□□ -1.6
PDE1YGL248W DIA4P38705 446 aaPredicted RBP5.05□□□□□ -1.6
PDE1YGL248W TRM5P38793 499 aa5.05□□□□□ -1.6
PDE1YGL248W YHR078WP38799 552 aa5.05□□□□□ -1.6
PDE1YGL248W YHR122WP38829 231 aa5.05□□□□□ -1.6
PDE1YGL248W SRP14P38985 146 aa5.05□□□□□ -1.6
PDE1YGL248W FET3P38993 636 aa5.05□□□□□ -1.6
PDE1YGL248W CCT2P39076 527 aaKnown RBP5.05□□□□□ -1.6
PDE1YGL248W POG1P40473 351 aa5.05□□□□□ -1.6
PDE1YGL248W UTP25P40498 721 aaKnown RBP5.05□□□□□ -1.6
PDE1YGL248W YJL163CP46996 555 aa5.05□□□□□ -1.6
PDE1YGL248W BNA3P47039 444 aaKnown RBP5.05□□□□□ -1.6
PDE1YGL248W YJR149WP47177 404 aa5.05□□□□□ -1.6
PDE1YGL248W YGL204CP53089 101 aa5.05□□□□□ -1.6
PDE1YGL248W NOP19P53317 196 aaPredicted RBP5.05□□□□□ -1.6
PDE1YGL248W YAT1P80235 687 aa5.05□□□□□ -1.6
PDE1YGL248W UBP16Q02863 499 aa5.05□□□□□ -1.6
PDE1YGL248W ADH6Q04894 360 aaKnown RBP5.05□□□□□ -1.6
PDE1YGL248W ASM4Q05166 528 aa5.05□□□□□ -1.6
PDE1YGL248W MCM21Q06675 368 aa5.05□□□□□ -1.6
PDE1YGL248W MUM3Q08750 479 aa5.05□□□□□ -1.6
PDE1YGL248W FRE5Q08908 694 aa5.05□□□□□ -1.6
PDE1YGL248W YPL216WQ08964 1102 aa5.05□□□□□ -1.6
PDE1YGL248W GRE1Q08969 168 aa5.05□□□□□ -1.6
PDE1YGL248W PKH2Q12236 1081 aaKnown RBP5.05□□□□□ -1.6
PDE1YGL248W PNS1Q12412 539 aa5.05□□□□□ -1.6
PDE1YGL248W RMD5Q12508 421 aa5.05□□□□□ -1.6
PDE1YGL248W SPO24Q3E752 67 aa5.05□□□□□ -1.6
PDE1YGL248W HTB1P02293 131 aaKnown RBP5.04□□□□□ -1.6
PDE1YGL248W HTB2P02294 131 aa5.04□□□□□ -1.6
PDE1YGL248W SPE1P08432 466 aa5.04□□□□□ -1.6
PDE1YGL248W YLL053CP0CD98 152 aa5.04□□□□□ -1.6
PDE1YGL248W MRP1P10662 321 aaKnown RBP5.04□□□□□ -1.6
PDE1YGL248W SRP54P20424 541 aaKnown RBP5.04□□□□□ -1.6
PDE1YGL248W PTC6P25646 442 aa5.04□□□□□ -1.6
PDE1YGL248W DEG1P31115 442 aaKnown RBP5.04□□□□□ -1.6
PDE1YGL248W MIC12P38341 106 aa5.04□□□□□ -1.6
PDE1YGL248W PCA1P38360 1216 aa5.04□□□□□ -1.6
PDE1YGL248W SBE22P38814 852 aa5.04□□□□□ -1.6
PDE1YGL248W ERG28P40030 148 aa5.04□□□□□ -1.6
PDE1YGL248W YER121WP40076 114 aa5.04□□□□□ -1.6
PDE1YGL248W IMO32P53219 342 aa5.04□□□□□ -1.6
PDE1YGL248W YIP3P53633 176 aa5.04□□□□□ -1.6
PDE1YGL248W ALG11P53954 548 aaKnown RBP5.04□□□□□ -1.6
PDE1YGL248W YDC1Q02896 317 aa5.04□□□□□ -1.6
PDE1YGL248W PLB2Q03674 706 aa5.04□□□□□ -1.6
PDE1YGL248W AIM33Q04516 312 aa5.04□□□□□ -1.6
PDE1YGL248W POS5Q06892 414 aa5.04□□□□□ -1.6
PDE1YGL248W CSM4Q08955 156 aa5.04□□□□□ -1.6
PDE1YGL248W POM34Q12445 299 aa5.04□□□□□ -1.6
PDE1YGL248W YPR1Q12458 312 aa5.04□□□□□ -1.6
PDE1YGL248W YBR255C-AQ3E776 120 aa5.04□□□□□ -1.6
PDE1YGL248W QCR7P00128 127 aa5.03□□□□□ -1.6
PDE1YGL248W HIS4P00815 799 aaKnown RBP5.03□□□□□ -1.6
PDE1YGL248W CHS1P08004 1131 aa5.03□□□□□ -1.6
PDE1YGL248W DSF1P0CX08 502 aa5.03□□□□□ -1.6
PDE1YGL248W YNR073CP0CX09 502 aa5.03□□□□□ -1.6
PDE1YGL248W MAS2P11914 482 aa5.03□□□□□ -1.6
PDE1YGL248W HPR1P17629 752 aaKnown RBP5.03□□□□□ -1.6
PDE1YGL248W RNR3P21672 869 aaKnown RBP5.03□□□□□ -1.6
PDE1YGL248W PDE1P22434 369 aa5.03□□□□□ -1.6
PDE1YGL248W CHA1P25379 360 aaKnown RBP5.03□□□□□ -1.6
PDE1YGL248W PUP3P25451 205 aaKnown RBP5.03□□□□□ -1.6
PDE1YGL248W ZUO1P32527 433 aaKnown RBP5.03□□□□□ -1.6
PDE1YGL248W DSS4P32601 143 aa5.03□□□□□ -1.6
PDE1YGL248W MRPL7P36519 292 aa5.03□□□□□ -1.6
PDE1YGL248W DUG2P38149 878 aa5.03□□□□□ -1.6
PDE1YGL248W OPY1P38271 328 aa5.03□□□□□ -1.6
PDE1YGL248W YER184CP39961 794 aa5.03□□□□□ -1.6
PDE1YGL248W YNL195CP40168 261 aa5.03□□□□□ -1.6
PDE1YGL248W JLP2P40206 208 aa5.03□□□□□ -1.6
PDE1YGL248W SNL1P40548 159 aa5.03□□□□□ -1.6
PDE1YGL248W YMR160WQ03823 816 aa5.03□□□□□ -1.6
PDE1YGL248W YET3Q07451 203 aa5.03□□□□□ -1.6
PDE1YGL248W TPO1Q07824 586 aa5.03□□□□□ -1.6
PDE1YGL248W RPN8Q08723 338 aaKnown RBP5.03□□□□□ -1.6
PDE1YGL248W RUP1Q12242 671 aa5.03□□□□□ -1.6
PDE1YGL248W GAL10P04397 699 aa5.02□□□□□ -1.61
PDE1YGL248W RHO2P06781 192 aa5.02□□□□□ -1.61
PDE1YGL248W ATP1P07251 545 aaKnown RBP5.02□□□□□ -1.61
PDE1YGL248W TUP1P16649 713 aa5.02□□□□□ -1.61
PDE1YGL248W IDH1P28834 360 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
PDE1YGL248W NDC1P32500 655 aa5.02□□□□□ -1.61
PDE1YGL248W PRP21P32524 280 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms