RNA–Protein interactions for RNA: YGL180W

ATG1, Transcript of Protein serine/threonine kinase, yeast

Gene ATG1, Length 2,694 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG1	YGL180W	SMX3	P54999	86 aa	Predicted RBP	4.82	□□□□□ -1.64
ATG1	YGL180W	SKI8	Q02793	397 aa	Predicted RBP	4.82	□□□□□ -1.64
ATG1	YGL180W	MYO5	Q04439	1219 aa	Known RBP	4.82	□□□□□ -1.64
ATG1	YGL180W	CYC7	P00045	113 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	PDE2	P06776	526 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	GPI12	P23797	304 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	MSK1	P32048	576 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	SAC1	P32368	623 aa	Known RBP	4.82	□□□□□ -1.64
ATG1	YGL180W	APL3	P38065	1025 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	YRB2	P40517	327 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	QRI1	P43123	477 aa	Known RBP	4.82	□□□□□ -1.64
ATG1	YGL180W	LOH1	P47055	219 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	TRM112	P53738	135 aa	Predicted RBP	4.82	□□□□□ -1.64
ATG1	YGL180W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
ATG1	YGL180W	RPM2	Q02773	1202 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	GPN3	Q06543	272 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	YCL012C	Q8J0M4	134 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	LAG2	Q92325	660 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	UBA3	Q99344	299 aa		4.82	□□□□□ -1.64
ATG1	YGL180W	MON2	P48563	1636 aa	Predicted RBP	4.82	□□□□□ -1.64
ATG1	YGL180W	SAL1	D6W196	494 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	WHI2	P12611	486 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	PMA2	P19657	947 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	TYR1	P20049	452 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	UTR1	P21373	530 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	PTP1	P25044	335 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	PEX3	P28795	441 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	DBP8	P38719	431 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	LNP1	P38878	278 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	MTW1	P39731	289 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	PMT6	P42934	759 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	IMD3	P50095	523 aa	Known RBP	4.81	□□□□□ -1.64
ATG1	YGL180W	NUP116	Q02630	1113 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	TAF12	Q03761	539 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	FUS2	Q05670	677 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	TSR1	Q07381	788 aa	Known RBP	4.81	□□□□□ -1.64
ATG1	YGL180W	SYO1	Q07395	620 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	YOL075C	Q08234	1294 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	YOS9	Q99220	542 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	ERG11	P10614	530 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	MXR2	P25566	168 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	DEG1	P31115	442 aa	Known RBP	4.81	□□□□□ -1.64
ATG1	YGL180W	VAM7	P32912	316 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	OCT1	P35999	772 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	SPT20	P50875	604 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	COS1	P53822	381 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	AIM33	Q04516	312 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	ECM30	Q06673	1274 aa		4.81	□□□□□ -1.64
ATG1	YGL180W	SDO1	Q07953	250 aa	Known RBP	4.81	□□□□□ -1.64
ATG1	YGL180W	MES1	P00958	751 aa	Known RBP	4.8	□□□□□ -1.64
ATG1	YGL180W	RAD1	P06777	1100 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	CLN3	P13365	580 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	RRT12	P25381	491 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	MRPL10	P36520	322 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	MTQ1	P53944	314 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	GPI15	P53961	229 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	CDC14	Q00684	551 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	SLT2	Q00772	484 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	SPP2	Q02521	185 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	GIP3	Q03016	1276 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	PDR8	Q06149	701 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	PIG1	Q06216	648 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	RPI1	P23250	407 aa	Known RBP	4.8	□□□□□ -1.64
ATG1	YGL180W	YHR182W	P38870	785 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	SIM1	P40472	476 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	ESBP6	P53918	673 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	SAM50	P53969	484 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	YPL068C	Q02749	293 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	NAT4	Q04751	285 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	GTO3	Q04806	366 aa		4.8	□□□□□ -1.64
ATG1	YGL180W	RHO1	P06780	209 aa	Known RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	ATP1	P07251	545 aa	Known RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	BAR1	P12630	587 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	PBN1	P25580	416 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	FUN19	P28003	413 aa	Predicted RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	PRS4	P38063	326 aa	Predicted RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	YEL020C	P39994	560 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	GLG2	P47011	380 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	CUS2	P53830	285 aa	Predicted RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	YPL034W	Q03083	165 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	RLI1	Q03195	608 aa	Known RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	YMR310C	Q04867	317 aa	Predicted RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	GRS2	Q06817	618 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	BRX1	Q08235	291 aa	Known RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	PEX27	Q08580	376 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	MET3	P08536	511 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	RPL35A	P0CX84	120 aa	Known RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	RPL35B	P0CX85	120 aa	Known RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	YCR016W	P25617	290 aa	Known RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	MSS51	P32335	436 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	RRP1	P35178	278 aa	Predicted RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	URA8	P38627	578 aa	Predicted RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	BNA3	P47039	444 aa	Known RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	RMR1	P53060	241 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	HXT11	P54862	567 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	BUR2	Q05949	395 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	MRPL35	Q06678	367 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	ABP140	Q08641	628 aa	Known RBP	4.79	□□□□□ -1.64
ATG1	YGL180W	FSH3	Q99369	266 aa		4.79	□□□□□ -1.64
ATG1	YGL180W	RPL24A	P04449	155 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms