RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C NSE1Q07913 336 aa4.07□□□□□ -1.76
SCL1YGL011C RAX1Q08760 435 aa4.07□□□□□ -1.76
SCL1YGL011C RNH203Q12338 110 aa4.07□□□□□ -1.76
SCL1YGL011C YRM1Q12340 786 aa4.07□□□□□ -1.76
SCL1YGL011C NCA2Q12374 616 aa4.07□□□□□ -1.76
SCL1YGL011C APE4P38821 490 aa4.06□□□□□ -1.76
SCL1YGL011C TOS3P43637 560 aa4.06□□□□□ -1.76
SCL1YGL011C TOS2P50078 622 aa4.06□□□□□ -1.76
SCL1YGL011C PMT5P52867 743 aa4.06□□□□□ -1.76
SCL1YGL011C RSA1Q08932 381 aa4.06□□□□□ -1.76
SCL1YGL011C ARO2P28777 376 aaKnown RBP4.05□□□□□ -1.76
SCL1YGL011C KAR9P32526 644 aa4.05□□□□□ -1.76
SCL1YGL011C SWI3P32591 825 aa4.05□□□□□ -1.76
SCL1YGL011C MNL1P38888 796 aa4.05□□□□□ -1.76
SCL1YGL011C YIP5P53108 310 aa4.05□□□□□ -1.76
SCL1YGL011C CWC25P53854 179 aaKnown RBP4.05□□□□□ -1.76
SCL1YGL011C ECM7Q06200 448 aa4.05□□□□□ -1.76
SCL1YGL011C CAP2P13517 287 aa4.04□□□□□ -1.76
SCL1YGL011C EXG1P23776 448 aaKnown RBP4.04□□□□□ -1.76
SCL1YGL011C MNS1P32906 549 aa4.04□□□□□ -1.76
SCL1YGL011C RRP1P35178 278 aaPredicted RBP4.04□□□□□ -1.76
SCL1YGL011C SBE22P38814 852 aa4.04□□□□□ -1.76
SCL1YGL011C PAN6P40459 309 aa4.04□□□□□ -1.76
SCL1YGL011C PAC11P40960 533 aa4.04□□□□□ -1.76
SCL1YGL011C YGR210CP42942 411 aa4.04□□□□□ -1.76
SCL1YGL011C HRI1Q05905 244 aaKnown RBP4.04□□□□□ -1.76
SCL1YGL011C RPL12AP0CX53 165 aaKnown RBP4.03□□□□□ -1.76
SCL1YGL011C RPL12BP0CX54 165 aa4.03□□□□□ -1.76
SCL1YGL011C CLN3P13365 580 aa4.03□□□□□ -1.76
SCL1YGL011C PET123P17558 318 aa4.03□□□□□ -1.76
SCL1YGL011C DAL2P25335 343 aa4.03□□□□□ -1.76
SCL1YGL011C SLM5P25345 492 aaKnown RBP4.03□□□□□ -1.76
SCL1YGL011C POP5P28005 173 aa4.03□□□□□ -1.76
SCL1YGL011C PHA2P32452 334 aa4.03□□□□□ -1.76
SCL1YGL011C SWD3P38123 315 aa4.03□□□□□ -1.76
SCL1YGL011C MLC1P53141 149 aa4.03□□□□□ -1.76
SCL1YGL011C NUP116Q02630 1113 aa4.03□□□□□ -1.76
SCL1YGL011C FRE6Q12473 712 aa4.03□□□□□ -1.76
SCL1YGL011C ATP1P07251 545 aaKnown RBP4.02□□□□□ -1.77
SCL1YGL011C MRPL4P36517 319 aa4.02□□□□□ -1.77
SCL1YGL011C YSW1P38280 609 aa4.02□□□□□ -1.77
SCL1YGL011C SPP381P38282 291 aaPredicted RBP4.02□□□□□ -1.77
SCL1YGL011C STE24P47154 453 aa4.02□□□□□ -1.77
SCL1YGL011C COS1P53822 381 aa4.02□□□□□ -1.77
SCL1YGL011C YPL107WQ02873 248 aa4.02□□□□□ -1.77
SCL1YGL011C URC2Q04411 772 aa4.02□□□□□ -1.77
SCL1YGL011C AHC1Q12433 566 aa4.02□□□□□ -1.77
SCL1YGL011C MSP1P28737 362 aa4.01□□□□□ -1.77
SCL1YGL011C COX13P32799 129 aa4.01□□□□□ -1.77
SCL1YGL011C WSS1P38838 269 aa4.01□□□□□ -1.77
SCL1YGL011C COX14P39103 70 aa4.01□□□□□ -1.77
SCL1YGL011C YIL029CP40538 142 aa4.01□□□□□ -1.77
SCL1YGL011C EPL1P43572 832 aa4.01□□□□□ -1.77
SCL1YGL011C YJR085CP47131 105 aaKnown RBP4.01□□□□□ -1.77
SCL1YGL011C ASN2P49090 572 aaKnown RBP4.01□□□□□ -1.77
SCL1YGL011C YGL242CP53066 181 aa4.01□□□□□ -1.77
SCL1YGL011C MRM2P53123 320 aa4.01□□□□□ -1.77
SCL1YGL011C GIS2P53849 153 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
SCL1YGL011C IPK1Q06667 281 aa4.01□□□□□ -1.77
SCL1YGL011C ASA1Q06822 443 aa4.01□□□□□ -1.77
SCL1YGL011C CEX1Q12453 761 aa4.01□□□□□ -1.77
SCL1YGL011C POM152P39685 1337 aa4□□□□□ -1.77
SCL1YGL011C ADH2P00331 348 aaKnown RBP4□□□□□ -1.77
SCL1YGL011C SSC1P0CS90 654 aaKnown RBP4□□□□□ -1.77
SCL1YGL011C DAP2P18962 818 aa4□□□□□ -1.77
SCL1YGL011C DPH5P32469 300 aaPredicted RBP4□□□□□ -1.77
SCL1YGL011C YOX1P34161 385 aa4□□□□□ -1.77
SCL1YGL011C ADH5P38113 351 aaKnown RBP4□□□□□ -1.77
SCL1YGL011C KAP104P38217 918 aaKnown RBP4□□□□□ -1.77
SCL1YGL011C YHR177WP38867 453 aa4□□□□□ -1.77
SCL1YGL011C ATM1P40416 690 aa4□□□□□ -1.77
SCL1YGL011C MDE1P47095 244 aa4□□□□□ -1.77
SCL1YGL011C RRP46P53256 223 aaPredicted RBP4□□□□□ -1.77
SCL1YGL011C YGR117CP53270 476 aa4□□□□□ -1.77
SCL1YGL011C RTT102P53330 157 aa4□□□□□ -1.77
SCL1YGL011C PRP3Q03338 469 aaPredicted RBP4□□□□□ -1.77
SCL1YGL011C MDM36Q06820 579 aa4□□□□□ -1.77
SCL1YGL011C CUE5Q08412 411 aaKnown RBP4□□□□□ -1.77
SCL1YGL011C FDH1Q08911 376 aa4□□□□□ -1.77
SCL1YGL011C YDR061WQ12298 539 aa4□□□□□ -1.77
SCL1YGL011C HRT3Q12347 344 aa4□□□□□ -1.77
SCL1YGL011C TPK3P05986 398 aa3.99□□□□□ -1.77
SCL1YGL011C NAM2P11325 894 aa3.99□□□□□ -1.77
SCL1YGL011C YEF1P32622 495 aa3.99□□□□□ -1.77
SCL1YGL011C LCB3P47013 409 aa3.99□□□□□ -1.77
SCL1YGL011C BTN2P53286 410 aa3.99□□□□□ -1.77
SCL1YGL011C MDG1P53885 366 aa3.99□□□□□ -1.77
SCL1YGL011C EOS1P53938 366 aa3.99□□□□□ -1.77
SCL1YGL011C SPR6Q01684 191 aa3.99□□□□□ -1.77
SCL1YGL011C NDE2Q07500 545 aa3.99□□□□□ -1.77
SCL1YGL011C NOP6Q07623 225 aaKnown RBP3.99□□□□□ -1.77
SCL1YGL011C RRG7Q08774 242 aaPredicted RBP3.99□□□□□ -1.77
SCL1YGL011C NFI1Q12216 726 aa3.99□□□□□ -1.77
SCL1YGL011C SKS1Q12505 502 aa3.99□□□□□ -1.77
SCL1YGL011C RPL6BP05739 176 aaKnown RBP3.98□□□□□ -1.77
SCL1YGL011C ISY1P21374 235 aaPredicted RBP3.98□□□□□ -1.77
SCL1YGL011C VPH1P32563 840 aaKnown RBP3.98□□□□□ -1.77
SCL1YGL011C CSE2P33308 149 aa3.98□□□□□ -1.77
SCL1YGL011C SKT5P34226 696 aa3.98□□□□□ -1.77
SCL1YGL011C DOA1P36037 715 aa3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms