RNA–Protein interactions for RNA: YER059W

PCL6, Transcript of Pho85p cyclin of the Pho80p subfamily, yeast

Gene PCL6, Length 1,263 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL6	YER059W	PRO3	P32263	286 aa	Known RBP	4.79	□□□□□ -1.64
PCL6	YER059W	SPT10	P35208	640 aa		4.79	□□□□□ -1.64
PCL6	YER059W	MSG5	P38590	489 aa		4.79	□□□□□ -1.64
PCL6	YER059W	ATM1	P40416	690 aa		4.79	□□□□□ -1.64
PCL6	YER059W	AZR1	P50080	613 aa		4.79	□□□□□ -1.64
PCL6	YER059W	HST1	P53685	503 aa		4.79	□□□□□ -1.64
PCL6	YER059W	CRZ1	P53968	678 aa		4.79	□□□□□ -1.64
PCL6	YER059W	SMA2	Q04658	369 aa		4.79	□□□□□ -1.64
PCL6	YER059W	PEX27	Q08580	376 aa		4.79	□□□□□ -1.64
PCL6	YER059W	TPT1	Q12272	230 aa	Known RBP	4.79	□□□□□ -1.64
PCL6	YER059W	RRP12	Q12754	1228 aa	Known RBP	4.79	□□□□□ -1.64
PCL6	YER059W	HEM2	P05373	342 aa		4.78	□□□□□ -1.64
PCL6	YER059W	CPR1	P14832	162 aa	Known RBP	4.78	□□□□□ -1.64
PCL6	YER059W	PSO2	P30620	661 aa		4.78	□□□□□ -1.64
PCL6	YER059W	MRP4	P32902	394 aa		4.78	□□□□□ -1.64
PCL6	YER059W	FAA2	P39518	744 aa		4.78	□□□□□ -1.64
PCL6	YER059W	SNL1	P40548	159 aa		4.78	□□□□□ -1.64
PCL6	YER059W	MKT1	P40850	830 aa	Known RBP	4.78	□□□□□ -1.64
PCL6	YER059W	YJL213W	P40896	331 aa		4.78	□□□□□ -1.64
PCL6	YER059W	OST1	P41543	476 aa	Known RBP	4.78	□□□□□ -1.64
PCL6	YER059W	TOS3	P43637	560 aa		4.78	□□□□□ -1.64
PCL6	YER059W	SFH5	P47008	294 aa		4.78	□□□□□ -1.64
PCL6	YER059W	GOR1	P53839	350 aa		4.78	□□□□□ -1.64
PCL6	YER059W	SNX3	Q08826	162 aa	Known RBP	4.78	□□□□□ -1.64
PCL6	YER059W	NCA2	Q12374	616 aa		4.78	□□□□□ -1.64
PCL6	YER059W	MCK1	P21965	375 aa	Known RBP	4.77	□□□□□ -1.65
PCL6	YER059W	SRB2	P34162	210 aa		4.77	□□□□□ -1.65
PCL6	YER059W	MIX23	P38162	196 aa		4.77	□□□□□ -1.65
PCL6	YER059W	YHR177W	P38867	453 aa		4.77	□□□□□ -1.65
PCL6	YER059W	YFL067W	P43537	175 aa		4.77	□□□□□ -1.65
PCL6	YER059W	STE24	P47154	453 aa		4.77	□□□□□ -1.65
PCL6	YER059W	RTC5	Q12108	567 aa	Known RBP	4.77	□□□□□ -1.65
PCL6	YER059W	TIP41	Q12199	356 aa		4.77	□□□□□ -1.65
PCL6	YER059W	SFG1	Q12507	346 aa		4.77	□□□□□ -1.65
PCL6	YER059W	TPK3	P05986	398 aa		4.76	□□□□□ -1.65
PCL6	YER059W	THR4	P16120	514 aa	Known RBP	4.76	□□□□□ -1.65
PCL6	YER059W	YCL068C	P25593	260 aa		4.76	□□□□□ -1.65
PCL6	YER059W	LOS1	P33418	1100 aa	Predicted RBP	4.76	□□□□□ -1.65
PCL6	YER059W	SKT5	P34226	696 aa		4.76	□□□□□ -1.65
PCL6	YER059W	YBP1	P38315	674 aa		4.76	□□□□□ -1.65
PCL6	YER059W	MTC6	P38849	526 aa		4.76	□□□□□ -1.65
PCL6	YER059W	COS10	P52924	374 aa		4.76	□□□□□ -1.65
PCL6	YER059W	WSC2	P53832	503 aa		4.76	□□□□□ -1.65
PCL6	YER059W	SPR6	Q01684	191 aa		4.76	□□□□□ -1.65
PCL6	YER059W	CCE1	Q03702	353 aa		4.76	□□□□□ -1.65
PCL6	YER059W	YMR310C	Q04867	317 aa	Predicted RBP	4.76	□□□□□ -1.65
PCL6	YER059W	BCH1	Q05029	724 aa		4.76	□□□□□ -1.65
PCL6	YER059W	NOP6	Q07623	225 aa	Known RBP	4.76	□□□□□ -1.65
PCL6	YER059W	LDS2	Q08218	356 aa		4.76	□□□□□ -1.65
PCL6	YER059W	THP3	Q12049	470 aa	Known RBP	4.76	□□□□□ -1.65
PCL6	YER059W	GDH1	P07262	454 aa	Known RBP	4.75	□□□□□ -1.65
PCL6	YER059W	YKL097C	P34245	136 aa		4.75	□□□□□ -1.65
PCL6	YER059W	PTK1	P36002	662 aa	Predicted RBP	4.75	□□□□□ -1.65
PCL6	YER059W	PES4	P39684	611 aa		4.75	□□□□□ -1.65
PCL6	YER059W	PMT5	P52867	743 aa		4.75	□□□□□ -1.65
PCL6	YER059W	ASA1	Q06822	443 aa		4.75	□□□□□ -1.65
PCL6	YER059W	NDE2	Q07500	545 aa		4.75	□□□□□ -1.65
PCL6	YER059W	GLE1	Q12315	538 aa		4.75	□□□□□ -1.65
PCL6	YER059W	HIF1	Q12373	385 aa		4.75	□□□□□ -1.65
PCL6	YER059W	MAS1	P10507	462 aa		4.74	□□□□□ -1.65
PCL6	YER059W	SAG1	P20840	650 aa		4.74	□□□□□ -1.65
PCL6	YER059W	RNA14	P25298	677 aa	Known RBP	4.74	□□□□□ -1.65
PCL6	YER059W	MUD1	P32605	298 aa	Known RBP	4.74	□□□□□ -1.65
PCL6	YER059W	SUR1	P33300	382 aa		4.74	□□□□□ -1.65
PCL6	YER059W	CHK1	P38147	527 aa		4.74	□□□□□ -1.65
PCL6	YER059W	OSW5	P40219	148 aa		4.74	□□□□□ -1.65
PCL6	YER059W	YDL186W	P48568	277 aa		4.74	□□□□□ -1.65
PCL6	YER059W	YGR117C	P53270	476 aa		4.74	□□□□□ -1.65
PCL6	YER059W	PPT2	Q12036	173 aa		4.74	□□□□□ -1.65
PCL6	YER059W	YLR108C	Q12259	485 aa		4.74	□□□□□ -1.65
PCL6	YER059W	POM152	P39685	1337 aa		4.73	□□□□□ -1.65
PCL6	YER059W	RNA1	P11745	407 aa	Known RBP	4.73	□□□□□ -1.65
PCL6	YER059W	HEM15	P16622	393 aa		4.73	□□□□□ -1.65
PCL6	YER059W	MSK1	P32048	576 aa		4.73	□□□□□ -1.65
PCL6	YER059W	HMX1	P32339	317 aa		4.73	□□□□□ -1.65
PCL6	YER059W	RRP46	P53256	223 aa	Predicted RBP	4.73	□□□□□ -1.65
PCL6	YER059W	HXT11	P54862	567 aa		4.73	□□□□□ -1.65
PCL6	YER059W	RAX1	Q08760	435 aa		4.73	□□□□□ -1.65
PCL6	YER059W	MDY2	Q12285	212 aa		4.73	□□□□□ -1.65
PCL6	YER059W	YOP1	Q12402	180 aa		4.73	□□□□□ -1.65
PCL6	YER059W	EXG1	P23776	448 aa	Known RBP	4.72	□□□□□ -1.65
PCL6	YER059W	TIF5	P38431	405 aa	Known RBP	4.72	□□□□□ -1.65
PCL6	YER059W	RRF1	P38771	230 aa		4.72	□□□□□ -1.65
PCL6	YER059W	SIM1	P40472	476 aa		4.72	□□□□□ -1.65
PCL6	YER059W	IDP2	P41939	412 aa		4.72	□□□□□ -1.65
PCL6	YER059W	WWM1	P43582	211 aa	Known RBP	4.72	□□□□□ -1.65
PCL6	YER059W	GPI8	P49018	411 aa		4.72	□□□□□ -1.65
PCL6	YER059W	MSO1	P53604	210 aa	Known RBP	4.72	□□□□□ -1.65
PCL6	YER059W	PRO2	P54885	456 aa	Known RBP	4.72	□□□□□ -1.65
PCL6	YER059W	YOR012W	Q12351	137 aa		4.72	□□□□□ -1.65
PCL6	YER059W	CAP2	P13517	287 aa		4.71	□□□□□ -1.66
PCL6	YER059W	AGA1	P32323	725 aa		4.71	□□□□□ -1.66
PCL6	YER059W	YEF1	P32622	495 aa		4.71	□□□□□ -1.66
PCL6	YER059W	YDR089W	P38966	869 aa		4.71	□□□□□ -1.66
PCL6	YER059W	NCA3	P46955	337 aa		4.71	□□□□□ -1.66
PCL6	YER059W	RET3	P53600	189 aa		4.71	□□□□□ -1.66
PCL6	YER059W	YMR317W	Q04893	1140 aa		4.71	□□□□□ -1.66
PCL6	YER059W	HNT3	Q08702	217 aa		4.71	□□□□□ -1.66
PCL6	YER059W	EFB1	P32471	206 aa	Known RBP	4.7	□□□□□ -1.66
PCL6	YER059W	MCR1	P36060	302 aa	Known RBP	4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms