RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C TKL2P33315 681 aa0.35□□□□□ -2.35
SPG3YDR504C HUA2Q12134 243 aa0.35□□□□□ -2.35
SPG3YDR504C TPT1Q12272 230 aaKnown RBP0.35□□□□□ -2.35
SPG3YDR504C SEC39Q12745 709 aa0.35□□□□□ -2.35
SPG3YDR504C STE7P06784 515 aa0.34□□□□□ -2.36
SPG3YDR504C MSP1P28737 362 aa0.34□□□□□ -2.36
SPG3YDR504C WSC4P38739 605 aa0.34□□□□□ -2.36
SPG3YDR504C SEH1P53011 349 aaKnown RBP0.34□□□□□ -2.36
SPG3YDR504C YGR066CP53242 292 aa0.34□□□□□ -2.36
SPG3YDR504C FRE8Q12209 686 aa0.34□□□□□ -2.36
SPG3YDR504C ADH3P07246 375 aaKnown RBP0.33□□□□□ -2.36
SPG3YDR504C SOL2P37262 315 aa0.33□□□□□ -2.36
SPG3YDR504C MNN5P46982 586 aa0.33□□□□□ -2.36
SPG3YDR504C VMS1Q04311 632 aaKnown RBP0.33□□□□□ -2.36
SPG3YDR504C YDR115WQ04598 105 aa0.33□□□□□ -2.36
SPG3YDR504C RIP1P08067 215 aa0.32□□□□□ -2.36
SPG3YDR504C SKG6P32900 734 aaPredicted RBP0.32□□□□□ -2.36
SPG3YDR504C PTH2P34222 208 aa0.32□□□□□ -2.36
SPG3YDR504C RFC3P38629 340 aa0.32□□□□□ -2.36
SPG3YDR504C YJR011CP47086 261 aaPredicted RBP0.32□□□□□ -2.36
SPG3YDR504C VTI1Q04338 217 aa0.32□□□□□ -2.36
SPG3YDR504C PIS1P06197 220 aaKnown RBP0.31□□□□□ -2.36
SPG3YDR504C EXG1P23776 448 aaKnown RBP0.31□□□□□ -2.36
SPG3YDR504C DBF4P32325 704 aa0.31□□□□□ -2.36
SPG3YDR504C DBP7P36120 742 aaKnown RBP0.31□□□□□ -2.36
SPG3YDR504C VHC1P38329 1120 aa0.31□□□□□ -2.36
SPG3YDR504C DOT5P40553 215 aa0.31□□□□□ -2.36
SPG3YDR504C COS1P53822 381 aa0.31□□□□□ -2.36
SPG3YDR504C CDD1Q06549 142 aa0.31□□□□□ -2.36
SPG3YDR504C LOT6Q07923 191 aa0.31□□□□□ -2.36
SPG3YDR504C CDC16P09798 840 aa0.3□□□□□ -2.36
SPG3YDR504C MIG1P27705 504 aa0.3□□□□□ -2.36
SPG3YDR504C SKT5P34226 696 aa0.3□□□□□ -2.36
SPG3YDR504C CST26P38226 397 aa0.3□□□□□ -2.36
SPG3YDR504C YGL088WP53151 121 aa0.3□□□□□ -2.36
SPG3YDR504C ALF1P53904 254 aa0.3□□□□□ -2.36
SPG3YDR504C YOR376WQ08900 122 aa0.3□□□□□ -2.36
SPG3YDR504C CAP2P13517 287 aa0.29□□□□□ -2.36
SPG3YDR504C EPT1P22140 391 aa0.29□□□□□ -2.36
SPG3YDR504C RRT13P40042 185 aa0.29□□□□□ -2.36
SPG3YDR504C VPS54Q12071 889 aa0.29□□□□□ -2.36
SPG3YDR504C MCT1Q12283 360 aa0.29□□□□□ -2.36
SPG3YDR504C YML133CQ03099 1374 aa0.29□□□□□ -2.36
SPG3YDR504C YLL067CQ07888 1374 aa0.29□□□□□ -2.36
SPG3YDR504C YLL066CQ99208 1374 aa0.29□□□□□ -2.36
SPG3YDR504C DFR1P07807 211 aaKnown RBP RIP-Chip data0.28□□□□□ -2.36not detected
SPG3YDR504C SPS4P09937 338 aa0.28□□□□□ -2.36
SPG3YDR504C CKA2P19454 339 aa0.28□□□□□ -2.36
SPG3YDR504C GIT1P25346 518 aa0.28□□□□□ -2.36
SPG3YDR504C TOA1P32773 286 aa0.28□□□□□ -2.36
SPG3YDR504C RRP4P38792 359 aaKnown RBP0.28□□□□□ -2.36
SPG3YDR504C YAL037WP39728 267 aa0.28□□□□□ -2.36
SPG3YDR504C VTC2P43585 828 aa0.28□□□□□ -2.36
SPG3YDR504C ASA1Q06822 443 aa0.28□□□□□ -2.36
SPG3YDR504C SRO7Q12038 1033 aa0.28□□□□□ -2.36
SPG3YDR504C FCY22Q12119 530 aa0.28□□□□□ -2.36
SPG3YDR504C FOB1O13329 566 aa0.27□□□□□ -2.37
SPG3YDR504C GPH1P06738 902 aaKnown RBP0.27□□□□□ -2.37
SPG3YDR504C CBS1P14066 229 aa0.27□□□□□ -2.37
SPG3YDR504C AIP1P46680 615 aaKnown RBP0.27□□□□□ -2.37
SPG3YDR504C MRX6P48564 524 aa0.27□□□□□ -2.37
SPG3YDR504C GIP3Q03016 1276 aa0.27□□□□□ -2.37
SPG3YDR504C YHC1Q05900 231 aaKnown RBP0.27□□□□□ -2.37
SPG3YDR504C MDM30Q05930 598 aa0.27□□□□□ -2.37
SPG3YDR504C YLR177WQ06251 628 aa0.27□□□□□ -2.37
SPG3YDR504C CLP1Q08685 445 aaPredicted RBP0.27□□□□□ -2.37
SPG3YDR504C YDL199CQ12407 687 aa0.27□□□□□ -2.37
SPG3YDR504C YCR024C-BQ3E7Z8 88 aa0.27□□□□□ -2.37
SPG3YDR504C SEC53P07283 254 aaKnown RBP0.26□□□□□ -2.37
SPG3YDR504C TOM20P35180 183 aa0.26□□□□□ -2.37
SPG3YDR504C TRF5P48561 642 aaKnown RBP0.26□□□□□ -2.37
SPG3YDR504C TWF1P53250 332 aa0.26□□□□□ -2.37
SPG3YDR504C PRM6Q04705 352 aa0.26□□□□□ -2.37
SPG3YDR504C RCN2Q12044 265 aa0.26□□□□□ -2.37
SPG3YDR504C FLO11P08640 1367 aa0.25□□□□□ -2.37
SPG3YDR504C APE3P37302 537 aaKnown RBP0.25□□□□□ -2.37
SPG3YDR504C PRP38Q00723 242 aaPredicted RBP0.25□□□□□ -2.37
SPG3YDR504C GIR2Q03768 265 aaPredicted RBP0.25□□□□□ -2.37
SPG3YDR504C YDL114WQ07530 308 aa0.25□□□□□ -2.37
SPG3YDR504C YAL067W-AQ8TGK6 75 aa0.25□□□□□ -2.37
SPG3YDR504C FUN26P31381 517 aa0.24□□□□□ -2.37
SPG3YDR504C SOR1P35497 357 aaKnown RBP0.24□□□□□ -2.37
SPG3YDR504C YBR056WP38081 501 aa0.24□□□□□ -2.37
SPG3YDR504C MED6P38782 295 aa0.24□□□□□ -2.37
SPG3YDR504C HEM14P40012 539 aa0.24□□□□□ -2.37
SPG3YDR504C TAF12Q03761 539 aa0.24□□□□□ -2.37
SPG3YDR504C YMR155WQ03795 547 aa0.24□□□□□ -2.37
SPG3YDR504C SOR2Q07786 357 aa0.24□□□□□ -2.37
SPG3YDR504C MRS6P32864 603 aaKnown RBP0.23□□□□□ -2.37
SPG3YDR504C SEC66P33754 206 aa0.23□□□□□ -2.37
SPG3YDR504C PMT1P33775 817 aa0.23□□□□□ -2.37
SPG3YDR504C YKR032WP36127 104 aa0.23□□□□□ -2.37
SPG3YDR504C MET28P40573 187 aa0.23□□□□□ -2.37
SPG3YDR504C LDB17Q12342 491 aa0.23□□□□□ -2.37
SPG3YDR504C PPH22P23595 377 aa0.22□□□□□ -2.37
SPG3YDR504C YDL211CQ12121 372 aa0.22□□□□□ -2.37
SPG3YDR504C HTZ1Q12692 134 aaKnown RBP0.22□□□□□ -2.37
SPG3YDR504C RHB1P25378 209 aa0.21□□□□□ -2.38
SPG3YDR504C LSM12P38828 187 aaKnown RBP0.21□□□□□ -2.38
SPG3YDR504C ECM14P38836 430 aa0.21□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms