RNA–Protein interactions for RNA: YDR478W

SNM1, Transcript of Ribonuclease MRP complex subunit, yeast

Gene SNM1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNM1	YDR478W	DBR1	P24309	405 aa	Known RBP	4.68	□□□□□ -1.66
SNM1	YDR478W	PEX2	P32800	271 aa		4.68	□□□□□ -1.66
SNM1	YDR478W	SIP2	P34164	415 aa	Known RBP	4.68	□□□□□ -1.66
SNM1	YDR478W	YHR122W	P38829	231 aa		4.68	□□□□□ -1.66
SNM1	YDR478W	LOC1	P43586	204 aa	Predicted RBP	4.68	□□□□□ -1.66
SNM1	YDR478W	RET3	P53600	189 aa		4.68	□□□□□ -1.66
SNM1	YDR478W	STE23	Q06010	1027 aa		4.68	□□□□□ -1.66
SNM1	YDR478W	YLH47	Q06493	454 aa		4.68	□□□□□ -1.66
SNM1	YDR478W	ASA1	Q06822	443 aa		4.68	□□□□□ -1.66
SNM1	YDR478W	GEP3	Q08622	556 aa		4.68	□□□□□ -1.66
SNM1	YDR478W	PKH2	Q12236	1081 aa	Known RBP	4.68	□□□□□ -1.66
SNM1	YDR478W	SPO24	Q3E752	67 aa		4.68	□□□□□ -1.66
SNM1	YDR478W	YNL162W-A	Q3E7A8	72 aa		4.68	□□□□□ -1.66
SNM1	YDR478W	ATP1	P07251	545 aa	Known RBP	4.67	□□□□□ -1.66
SNM1	YDR478W	YLL053C	P0CD98	152 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	CLN3	P13365	580 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	TIP1	P27654	210 aa	Predicted RBP	4.67	□□□□□ -1.66
SNM1	YDR478W	EFB1	P32471	206 aa	Known RBP	4.67	□□□□□ -1.66
SNM1	YDR478W	SKT5	P34226	696 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	SWC5	P38326	303 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	PRP39	P39682	629 aa	Known RBP	4.67	□□□□□ -1.66
SNM1	YDR478W	XBP1	P40489	647 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	LYS12	P40495	371 aa	Known RBP	4.67	□□□□□ -1.66
SNM1	YDR478W	STE24	P47154	453 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	POP6	P53218	158 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	CAB5	Q03941	241 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	DSE3	Q08729	430 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	APC2	Q12440	853 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	CSR2	Q12734	1121 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	FSH3	Q99369	266 aa		4.67	□□□□□ -1.66
SNM1	YDR478W	SUP35	P05453	685 aa	Known RBP	4.66	□□□□□ -1.66
SNM1	YDR478W	RNA1	P11745	407 aa	Known RBP	4.66	□□□□□ -1.66
SNM1	YDR478W	GLN3	P18494	730 aa		4.66	□□□□□ -1.66
SNM1	YDR478W	PTR2	P32901	601 aa		4.66	□□□□□ -1.66
SNM1	YDR478W	PEX18	P38855	283 aa		4.66	□□□□□ -1.66
SNM1	YDR478W	VOA1	P53262	265 aa		4.66	□□□□□ -1.66
SNM1	YDR478W	YLR281C	Q05863	155 aa		4.66	□□□□□ -1.66
SNM1	YDR478W	COQ11	Q05892	277 aa		4.66	□□□□□ -1.66
SNM1	YDR478W	MRPL35	Q06678	367 aa		4.66	□□□□□ -1.66
SNM1	YDR478W	RGS2	Q99188	309 aa		4.66	□□□□□ -1.66
SNM1	YDR478W	STE2	D6VTK4	431 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	SAR1	P20606	190 aa	Known RBP	4.65	□□□□□ -1.67
SNM1	YDR478W	YCP4	P25349	247 aa	Known RBP	4.65	□□□□□ -1.67
SNM1	YDR478W	GLC7	P32598	312 aa	Known RBP	4.65	□□□□□ -1.67
SNM1	YDR478W	TRS65	P32893	560 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	MNS1	P32906	549 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	KKQ8	P36004	724 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	SHO1	P40073	367 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	LCP5	P40079	357 aa	Predicted RBP	4.65	□□□□□ -1.67
SNM1	YDR478W	SEC9	P40357	651 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	GCD10	P41814	478 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	DIM1	P41819	318 aa	Known RBP	4.65	□□□□□ -1.67
SNM1	YDR478W	IKS1	P47042	667 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	PNC1	P53184	216 aa	Known RBP	4.65	□□□□□ -1.67
SNM1	YDR478W	ALF1	P53904	254 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	STP1	Q00947	519 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	YPL068C	Q02749	293 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	RRN5	Q02983	363 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	AIM33	Q04516	312 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	RRG8	Q06109	277 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	TPT1	Q12272	230 aa	Known RBP	4.65	□□□□□ -1.67
SNM1	YDR478W	YDR262W	Q12331	272 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	NCA2	Q12374	616 aa		4.65	□□□□□ -1.67
SNM1	YDR478W	AIM45	Q12480	344 aa	Known RBP	4.65	□□□□□ -1.67
SNM1	YDR478W	HEM2	P05373	342 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
SNM1	YDR478W	YKL097C	P34245	136 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	YUH1	P35127	236 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	RTC2	P38279	296 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	SPT8	P38915	602 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	MST28	P39552	234 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	TOS3	P43637	560 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	AVT4	P50944	713 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	SPO19	Q03029	223 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	VAC14	Q06708	880 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	YOL075C	Q08234	1294 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	YPL199C	Q08954	240 aa		4.64	□□□□□ -1.67
SNM1	YDR478W	MAS2	P11914	482 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	UGA1	P17649	471 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	SAM2	P19358	384 aa	Known RBP	4.63	□□□□□ -1.67
SNM1	YDR478W	MRPL8	P22353	238 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	CUE2	P36075	443 aa	Known RBP	4.63	□□□□□ -1.67
SNM1	YDR478W	SMC2	P38989	1170 aa	Known RBP	4.63	□□□□□ -1.67
SNM1	YDR478W	HAT2	P39984	401 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	YMR134W	P40207	237 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	ALG8	P40351	577 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	YJL070C	P40361	888 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	PCI8	P40512	444 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	LOH1	P47055	219 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	EMC2	P47133	292 aa	Known RBP	4.63	□□□□□ -1.67
SNM1	YDR478W	YDL186W	P48568	277 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	RIB4	P50861	169 aa	Predicted RBP	4.63	□□□□□ -1.67
SNM1	YDR478W	YGR117C	P53270	476 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	DBP6	P53734	629 aa	Known RBP	4.63	□□□□□ -1.67
SNM1	YDR478W	ARK1	P53974	638 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	SMP3	Q04174	516 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	ECM18	Q04623	453 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	THI7	Q05998	598 aa		4.63	□□□□□ -1.67
SNM1	YDR478W	KAP95	Q06142	861 aa	Known RBP	4.63	□□□□□ -1.67
SNM1	YDR478W	YOP1	Q12402	180 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms