RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A NCA2Q12374 616 aa2.93□□□□□ -1.94
YDR261W-AYDR261W-A PDX1P16451 410 aa2.92□□□□□ -1.94
YDR261W-AYDR261W-A RPB5P20434 215 aa2.92□□□□□ -1.94
YDR261W-AYDR261W-A PHA2P32452 334 aa2.92□□□□□ -1.94
YDR261W-AYDR261W-A CYS4P32582 507 aaKnown RBP2.92□□□□□ -1.94
YDR261W-AYDR261W-A SPT10P35208 640 aa2.92□□□□□ -1.94
YDR261W-AYDR261W-A AIM24P47127 394 aa2.92□□□□□ -1.94
YDR261W-AYDR261W-A APJ1P53940 528 aa2.92□□□□□ -1.94
YDR261W-AYDR261W-A ERB1Q04660 807 aaKnown RBP2.92□□□□□ -1.94
YDR261W-AYDR261W-A SNT309Q06091 175 aaPredicted RBP2.92□□□□□ -1.94
YDR261W-AYDR261W-A SMC5Q08204 1093 aa2.92□□□□□ -1.94
YDR261W-AYDR261W-A EAF3Q12432 401 aa2.92□□□□□ -1.94
YDR261W-AYDR261W-A CEX1Q12453 761 aa2.92□□□□□ -1.94
YDR261W-AYDR261W-A EXG1P23776 448 aaKnown RBP2.91□□□□□ -1.94
YDR261W-AYDR261W-A IES6P32617 166 aa2.91□□□□□ -1.94
YDR261W-AYDR261W-A OXA1P39952 402 aa2.91□□□□□ -1.94
YDR261W-AYDR261W-A YER079WP40052 210 aaKnown RBP2.91□□□□□ -1.94
YDR261W-AYDR261W-A GAT2P40209 560 aa2.91□□□□□ -1.94
YDR261W-AYDR261W-A TOS3P43637 560 aa2.91□□□□□ -1.94
YDR261W-AYDR261W-A LCB3P47013 409 aa2.91□□□□□ -1.94
YDR261W-AYDR261W-A YMR102CQ03177 834 aa2.91□□□□□ -1.94
YDR261W-AYDR261W-A LOT6Q07923 191 aa2.91□□□□□ -1.94
YDR261W-AYDR261W-A AEP3Q12089 606 aa2.91□□□□□ -1.94
YDR261W-AYDR261W-A PIS1P06197 220 aaKnown RBP2.9□□□□□ -1.95
YDR261W-AYDR261W-A DST1P07273 309 aa2.9□□□□□ -1.95
YDR261W-AYDR261W-A CAP2P13517 287 aa2.9□□□□□ -1.95
YDR261W-AYDR261W-A CLB1P24868 471 aa2.9□□□□□ -1.95
YDR261W-AYDR261W-A NIP1P32497 812 aaKnown RBP2.9□□□□□ -1.95
YDR261W-AYDR261W-A HEL1P36113 551 aa2.9□□□□□ -1.95
YDR261W-AYDR261W-A OLA1P38219 394 aaKnown RBP2.9□□□□□ -1.95
YDR261W-AYDR261W-A VHS2P40463 436 aa2.9□□□□□ -1.95
YDR261W-AYDR261W-A YPS6P40583 537 aa2.9□□□□□ -1.95
YDR261W-AYDR261W-A MST27P53176 234 aa2.9□□□□□ -1.95
YDR261W-AYDR261W-A CRH1P53301 507 aa2.9□□□□□ -1.95
YDR261W-AYDR261W-A RMT2Q03305 412 aa2.9□□□□□ -1.95
YDR261W-AYDR261W-A RPN9Q04062 393 aaKnown RBP2.9□□□□□ -1.95
YDR261W-AYDR261W-A CMS1Q07897 291 aaKnown RBP2.9□□□□□ -1.95
YDR261W-AYDR261W-A COX3P00420 269 aa2.89□□□□□ -1.95
YDR261W-AYDR261W-A ATP1P07251 545 aaKnown RBP2.89□□□□□ -1.95
YDR261W-AYDR261W-A RPC53P25441 422 aa2.89□□□□□ -1.95
YDR261W-AYDR261W-A DBF4P32325 704 aa2.89□□□□□ -1.95
YDR261W-AYDR261W-A DPH5P32469 300 aaPredicted RBP2.89□□□□□ -1.95
YDR261W-AYDR261W-A ASC1P38011 319 aaKnown RBP2.89□□□□□ -1.95
YDR261W-AYDR261W-A MMF1P40185 145 aaKnown RBP2.89□□□□□ -1.95
YDR261W-AYDR261W-A SIM1P40472 476 aa2.89□□□□□ -1.95
YDR261W-AYDR261W-A ZIM17P42844 174 aa2.89□□□□□ -1.95
YDR261W-AYDR261W-A PIB2P53191 635 aa2.89□□□□□ -1.95
YDR261W-AYDR261W-A RRP46P53256 223 aaPredicted RBP2.89□□□□□ -1.95
YDR261W-AYDR261W-A MKC7P53379 596 aa2.89□□□□□ -1.95
YDR261W-AYDR261W-A PRP42Q03776 544 aaKnown RBP2.89□□□□□ -1.95
YDR261W-AYDR261W-A YDR131CQ03899 556 aa2.89□□□□□ -1.95
YDR261W-AYDR261W-A RUP1Q12242 671 aa2.89□□□□□ -1.95
YDR261W-AYDR261W-A ISA2Q12425 185 aa2.89□□□□□ -1.95
YDR261W-AYDR261W-A PSK1P31374 1356 aa2.88□□□□□ -1.95
YDR261W-AYDR261W-A CDC21P06785 304 aa2.88□□□□□ -1.95
YDR261W-AYDR261W-A ARO3P14843 370 aaKnown RBP2.88□□□□□ -1.95
YDR261W-AYDR261W-A CPR2P23285 205 aa2.88□□□□□ -1.95
YDR261W-AYDR261W-A EGT2P42835 1041 aa2.88□□□□□ -1.95
YDR261W-AYDR261W-A TOM22P49334 152 aa2.88□□□□□ -1.95
YDR261W-AYDR261W-A VHS1Q03785 461 aa2.88□□□□□ -1.95
YDR261W-AYDR261W-A YET2Q04210 160 aa2.88□□□□□ -1.95
YDR261W-AYDR261W-A PRM6Q04705 352 aa2.88□□□□□ -1.95
YDR261W-AYDR261W-A HTZ1Q12692 134 aaKnown RBP2.88□□□□□ -1.95
YDR261W-AYDR261W-A CCH1P50077 2039 aa2.87□□□□□ -1.95
YDR261W-AYDR261W-A HSP104P31539 908 aaKnown RBP2.87□□□□□ -1.95
YDR261W-AYDR261W-A RIM1P32445 135 aaKnown RBP2.87□□□□□ -1.95
YDR261W-AYDR261W-A COX13P32799 129 aa2.87□□□□□ -1.95
YDR261W-AYDR261W-A ZTA1P38230 334 aaKnown RBP2.87□□□□□ -1.95
YDR261W-AYDR261W-A BAT1P38891 393 aaKnown RBP2.87□□□□□ -1.95
YDR261W-AYDR261W-A SER3P40054 469 aa2.87□□□□□ -1.95
YDR261W-AYDR261W-A YNL208WP40159 199 aaKnown RBP2.87□□□□□ -1.95
YDR261W-AYDR261W-A CLD1P53264 445 aa2.87□□□□□ -1.95
YDR261W-AYDR261W-A TDA1Q03533 586 aa2.87□□□□□ -1.95
YDR261W-AYDR261W-A NAG1Q8TGN9 163 aa2.87□□□□□ -1.95
YDR261W-AYDR261W-A POM152P39685 1337 aa2.86□□□□□ -1.95
YDR261W-AYDR261W-A SKN1P33336 771 aa2.86□□□□□ -1.95
YDR261W-AYDR261W-A YHK8P38776 514 aa2.86□□□□□ -1.95
YDR261W-AYDR261W-A ATG18P43601 500 aa2.86□□□□□ -1.95
YDR261W-AYDR261W-A TCB2P48231 1178 aa2.86□□□□□ -1.95
YDR261W-AYDR261W-A BNS1P50084 137 aa2.86□□□□□ -1.95
YDR261W-AYDR261W-A SPR6Q01684 191 aa2.86□□□□□ -1.95
YDR261W-AYDR261W-A AIM32Q04689 311 aa2.86□□□□□ -1.95
YDR261W-AYDR261W-A COX4P04037 155 aa2.85□□□□□ -1.95
YDR261W-AYDR261W-A CDC50P25656 391 aa2.85□□□□□ -1.95
YDR261W-AYDR261W-A YEF1P32622 495 aa2.85□□□□□ -1.95
YDR261W-AYDR261W-A YKL097CP34245 136 aa2.85□□□□□ -1.95
YDR261W-AYDR261W-A OM14P38325 134 aa2.85□□□□□ -1.95
YDR261W-AYDR261W-A INM1P38710 295 aa2.85□□□□□ -1.95
YDR261W-AYDR261W-A YER186CP40101 306 aa2.85□□□□□ -1.95
YDR261W-AYDR261W-A YGR111WP53265 400 aa2.85□□□□□ -1.95
YDR261W-AYDR261W-A MRPS16Q02608 121 aa2.85□□□□□ -1.95
YDR261W-AYDR261W-A MDH1P17505 334 aaKnown RBP RIP-Chip data2.84□□□□□ -1.96not detected
YDR261W-AYDR261W-A RAD5P32849 1169 aaPredicted RBP2.84□□□□□ -1.96
YDR261W-AYDR261W-A GPI18P38211 433 aa2.84□□□□□ -1.96
YDR261W-AYDR261W-A STN1P38960 494 aa2.84□□□□□ -1.96
YDR261W-AYDR261W-A YGR117CP53270 476 aa2.84□□□□□ -1.96
YDR261W-AYDR261W-A RNY1Q02933 434 aaKnown RBP2.84□□□□□ -1.96
YDR261W-AYDR261W-A DCI1Q08558 271 aa2.84□□□□□ -1.96
YDR261W-AYDR261W-A YPQ1Q12010 308 aa2.84□□□□□ -1.96
YDR261W-AYDR261W-A YCR024C-BQ3E7Z8 88 aa2.84□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms