RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C LCB3P47013 409 aa1.12□□□□□ -2.23
SSS1YDR086C RPN14P53196 417 aa1.12□□□□□ -2.23
SSS1YDR086C CCE1Q03702 353 aa1.12□□□□□ -2.23
SSS1YDR086C MDM30Q05930 598 aa1.12□□□□□ -2.23
SSS1YDR086C YDR056CQ12025 205 aa1.12□□□□□ -2.23
SSS1YDR086C ATG34Q12292 412 aa1.12□□□□□ -2.23
SSS1YDR086C TY1B-AO13527 1196 aaKnown RBP1.11□□□□□ -2.23
SSS1YDR086C GPI10P30777 616 aa1.11□□□□□ -2.23
SSS1YDR086C DPH5P32469 300 aaPredicted RBP1.11□□□□□ -2.23
SSS1YDR086C YBR056WP38081 501 aa1.11□□□□□ -2.23
SSS1YDR086C STP2P38704 541 aa1.11□□□□□ -2.23
SSS1YDR086C YHK8P38776 514 aa1.11□□□□□ -2.23
SSS1YDR086C RRP4P38792 359 aaKnown RBP1.11□□□□□ -2.23
SSS1YDR086C PEX22P39718 180 aa1.11□□□□□ -2.23
SSS1YDR086C SPO22P40511 975 aa1.11□□□□□ -2.23
SSS1YDR086C CPR7P47103 393 aa1.11□□□□□ -2.23
SSS1YDR086C YGR250CP53316 781 aaKnown RBP1.11□□□□□ -2.23
SSS1YDR086C RPL21AQ02753 160 aaKnown RBP1.11□□□□□ -2.23
SSS1YDR086C TDA1Q03533 586 aa1.11□□□□□ -2.23
SSS1YDR086C URH1Q04179 340 aa1.11□□□□□ -2.23
SSS1YDR086C YDL114WQ07530 308 aa1.11□□□□□ -2.23
SSS1YDR086C RPL21BQ12672 160 aaKnown RBP1.11□□□□□ -2.23
SSS1YDR086C HTZ1Q12692 134 aaKnown RBP1.11□□□□□ -2.23
SSS1YDR086C SAL1D6W196 494 aa1.1□□□□□ -2.23
SSS1YDR086C HOM3P10869 527 aa1.1□□□□□ -2.23
SSS1YDR086C RPL3P14126 387 aaKnown RBP1.1□□□□□ -2.23
SSS1YDR086C PUT4P15380 627 aa1.1□□□□□ -2.23
SSS1YDR086C GEX1P25596 615 aa1.1□□□□□ -2.23
SSS1YDR086C HXT3P32466 567 aaKnown RBP1.1□□□□□ -2.23
SSS1YDR086C SOR1P35497 357 aaKnown RBP1.1□□□□□ -2.23
SSS1YDR086C PRY2P36110 329 aa1.1□□□□□ -2.23
SSS1YDR086C PHO86P46956 311 aa1.1□□□□□ -2.23
SSS1YDR086C MNP1P53163 194 aaPredicted RBP1.1□□□□□ -2.23
SSS1YDR086C RRP45Q05636 305 aaKnown RBP1.1□□□□□ -2.23
SSS1YDR086C MFG1Q07684 458 aa1.1□□□□□ -2.23
SSS1YDR086C SOR2Q07786 357 aa1.1□□□□□ -2.23
SSS1YDR086C SIL1Q08199 421 aa1.1□□□□□ -2.23
SSS1YDR086C EXG1P23776 448 aaKnown RBP1.09□□□□□ -2.23
SSS1YDR086C BEM1P29366 551 aa1.09□□□□□ -2.23
SSS1YDR086C NIP1P32497 812 aaKnown RBP1.09□□□□□ -2.23
SSS1YDR086C RAD5P32849 1169 aaPredicted RBP1.09□□□□□ -2.23
SSS1YDR086C NTC20P38302 140 aaPredicted RBP1.09□□□□□ -2.23
SSS1YDR086C LSM12P38828 187 aaKnown RBP1.09□□□□□ -2.23
SSS1YDR086C PFS1P38872 237 aa1.09□□□□□ -2.23
SSS1YDR086C ARF3P40994 183 aaRIP-Chip data1.09□□□□□ -2.23not detected
SSS1YDR086C COS5P47187 383 aa1.09□□□□□ -2.23
SSS1YDR086C IMH1Q06704 911 aaKnown RBP1.09□□□□□ -2.23
SSS1YDR086C COS7Q07788 383 aa1.09□□□□□ -2.23
SSS1YDR086C VAM3Q12241 283 aa1.09□□□□□ -2.23
SSS1YDR086C YDR061WQ12298 539 aa1.09□□□□□ -2.23
SSS1YDR086C ASP3-2P0CX77 362 aa1.08□□□□□ -2.24
SSS1YDR086C ASP3-3P0CX78 362 aa1.08□□□□□ -2.24
SSS1YDR086C ASP3-4P0CX79 362 aa1.08□□□□□ -2.24
SSS1YDR086C ASP3-1P0CZ17 362 aa1.08□□□□□ -2.24
SSS1YDR086C CAP2P13517 287 aa1.08□□□□□ -2.24
SSS1YDR086C GIT1P25346 518 aa1.08□□□□□ -2.24
SSS1YDR086C ZIP1P31111 875 aa1.08□□□□□ -2.24
SSS1YDR086C IMP2'P32351 346 aa1.08□□□□□ -2.24
SSS1YDR086C RRN10P38204 145 aa1.08□□□□□ -2.24
SSS1YDR086C SMF1P38925 575 aa1.08□□□□□ -2.24
SSS1YDR086C GAT2P40209 560 aa1.08□□□□□ -2.24
SSS1YDR086C TOS3P43637 560 aa1.08□□□□□ -2.24
SSS1YDR086C COQ5P49017 307 aa1.08□□□□□ -2.24
SSS1YDR086C HST4P53688 370 aa1.08□□□□□ -2.24
SSS1YDR086C TIM10P87108 93 aa1.08□□□□□ -2.24
SSS1YDR086C COG4Q06096 861 aa1.08□□□□□ -2.24
SSS1YDR086C YPR096CO13587 100 aa1.07□□□□□ -2.24
SSS1YDR086C ARG3P05150 338 aa1.07□□□□□ -2.24
SSS1YDR086C FUN26P31381 517 aa1.07□□□□□ -2.24
SSS1YDR086C AGA2P32781 87 aa1.07□□□□□ -2.24
SSS1YDR086C SOL2P37262 315 aa1.07□□□□□ -2.24
SSS1YDR086C ECM34P38728 170 aa1.07□□□□□ -2.24
SSS1YDR086C VID27P40157 782 aa1.07□□□□□ -2.24
SSS1YDR086C YPS6P40583 537 aa1.07□□□□□ -2.24
SSS1YDR086C MMT1Q03218 510 aa1.07□□□□□ -2.24
SSS1YDR086C HRT1Q08273 121 aa1.07□□□□□ -2.24
SSS1YDR086C FCY22Q12119 530 aa1.07□□□□□ -2.24
SSS1YDR086C LDB17Q12342 491 aa1.07□□□□□ -2.24
SSS1YDR086C NCA2Q12374 616 aa1.07□□□□□ -2.24
SSS1YDR086C GRX6Q12438 231 aa1.07□□□□□ -2.24
SSS1YDR086C SRV2P17555 526 aaKnown RBP1.06□□□□□ -2.24
SSS1YDR086C AST1P35183 429 aa1.06□□□□□ -2.24
SSS1YDR086C MMS4P38257 691 aa1.06□□□□□ -2.24
SSS1YDR086C YGP1P38616 354 aaKnown RBP1.06□□□□□ -2.24
SSS1YDR086C YGL138CP53122 345 aa1.06□□□□□ -2.24
SSS1YDR086C RRP46P53256 223 aaPredicted RBP1.06□□□□□ -2.24
SSS1YDR086C SKO1Q02100 647 aa1.06□□□□□ -2.24
SSS1YDR086C STD1Q02794 444 aa1.06□□□□□ -2.24
SSS1YDR086C TIR4Q12218 487 aaPredicted RBP1.06□□□□□ -2.24
SSS1YDR086C BEM2P39960 2167 aaKnown RBP1.06□□□□□ -2.24
SSS1YDR086C PAB1P04147 577 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24 RIP-Chip
SSS1YDR086C CMK2P22517 447 aa1.05□□□□□ -2.24
SSS1YDR086C GFD2P25370 566 aaKnown RBP1.05□□□□□ -2.24
SSS1YDR086C TRR2P38816 342 aa1.05□□□□□ -2.24
SSS1YDR086C YJL144WP47009 104 aa1.05□□□□□ -2.24
SSS1YDR086C RTS3P53289 263 aa1.05□□□□□ -2.24
SSS1YDR086C ZRG17P53735 605 aa1.05□□□□□ -2.24
SSS1YDR086C COS1P53822 381 aa1.05□□□□□ -2.24
SSS1YDR086C RPA49Q01080 415 aaPredicted RBP1.05□□□□□ -2.24
SSS1YDR086C ENT5Q03769 411 aaKnown RBP1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms