RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A RPS5P26783 225 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A NIP1P32497 812 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A GCD7P32502 381 aaPredicted RBP-0.17□□□□□ -2.44
TFB5YDR079C-A UTR4P32626 227 aa-0.17□□□□□ -2.44
TFB5YDR079C-A BRR2P32639 2163 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A SOR1P35497 357 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A TPO5P36029 618 aa-0.17□□□□□ -2.44
TFB5YDR079C-A RPC37P36121 282 aa-0.17□□□□□ -2.44
TFB5YDR079C-A RIB1P38066 345 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YBL028CP38202 106 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YBR062CP38239 180 aa-0.17□□□□□ -2.44
TFB5YDR079C-A SSH1P38353 490 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A MMS21P38632 267 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YHL037CP38733 133 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YLF2P38746 405 aa-0.17□□□□□ -2.44
TFB5YDR079C-A OTU2P38747 307 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A YHR177WP38867 453 aa-0.17□□□□□ -2.44
TFB5YDR079C-A SMF1P38925 575 aa-0.17□□□□□ -2.44
TFB5YDR079C-A ALP1P38971 573 aa-0.17□□□□□ -2.44
TFB5YDR079C-A RBG1P39729 369 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YNL208WP40159 199 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A SGN1P40561 250 aaKnown RBP RIP-Chip data-0.17□□□□□ -2.44not detected
TFB5YDR079C-A MRPL49P40858 161 aaPredicted RBP-0.17□□□□□ -2.44
TFB5YDR079C-A ERG10P41338 398 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A VMA13P41807 478 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A ZIM17P42844 174 aa-0.17□□□□□ -2.44
TFB5YDR079C-A DPB11P47027 764 aaPredicted RBP-0.17□□□□□ -2.44
TFB5YDR079C-A MPP10P47083 593 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A MDE1P47095 244 aa-0.17□□□□□ -2.44
TFB5YDR079C-A ECM27P47144 725 aa-0.17□□□□□ -2.44
TFB5YDR079C-A BAT2P47176 376 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A NUP57P48837 541 aa-0.17□□□□□ -2.44
TFB5YDR079C-A ATP22P50273 684 aaPredicted RBP-0.17□□□□□ -2.44
TFB5YDR079C-A ALT2P52892 507 aa-0.17□□□□□ -2.44
TFB5YDR079C-A MGA1P53050 456 aa-0.17□□□□□ -2.44
TFB5YDR079C-A EMC4P53073 190 aa-0.17□□□□□ -2.44
TFB5YDR079C-A SLD3P53135 668 aa-0.17□□□□□ -2.44
TFB5YDR079C-A GTR2P53290 341 aa-0.17□□□□□ -2.44
TFB5YDR079C-A CRH1P53301 507 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YNR068CP53754 272 aa-0.17□□□□□ -2.44
TFB5YDR079C-A MDG1P53885 366 aa-0.17□□□□□ -2.44
TFB5YDR079C-A ALF1P53904 254 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YNL134CP53912 376 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A KTR5P53966 522 aaPredicted RBP-0.17□□□□□ -2.44
TFB5YDR079C-A REG1Q00816 1014 aa-0.17□□□□□ -2.44
TFB5YDR079C-A EGD1Q02642 157 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A YPL113CQ02961 396 aa-0.17□□□□□ -2.44
TFB5YDR079C-A MTG1Q03151 367 aaPredicted RBP-0.17□□□□□ -2.44
TFB5YDR079C-A YDR209CQ03480 137 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YDR210WQ03482 75 aa-0.17□□□□□ -2.44
TFB5YDR079C-A TAF12Q03761 539 aa-0.17□□□□□ -2.44
TFB5YDR079C-A MSC3Q05812 728 aa-0.17□□□□□ -2.44
TFB5YDR079C-A DCR2Q05924 578 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YPR078CQ06813 372 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YDL144CQ07589 356 aa-0.17□□□□□ -2.44
TFB5YDR079C-A SOR2Q07786 357 aa-0.17□□□□□ -2.44
TFB5YDR079C-A ALE1Q08548 619 aa-0.17□□□□□ -2.44
TFB5YDR079C-A AKR2Q12013 749 aa-0.17□□□□□ -2.44
TFB5YDR079C-A PSF3Q12146 194 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YPL150WQ12152 901 aa-0.17□□□□□ -2.44
TFB5YDR079C-A MED1Q12321 566 aa-0.17□□□□□ -2.44
TFB5YDR079C-A RTR2Q12378 196 aa-0.17□□□□□ -2.44
TFB5YDR079C-A KTI11Q3E840 82 aa-0.17□□□□□ -2.44
TFB5YDR079C-A RGS2Q99188 309 aa-0.17□□□□□ -2.44
TFB5YDR079C-A LAA1P39526 2014 aa-0.18□□□□□ -2.44
TFB5YDR079C-A USO1P25386 1790 aa-0.18□□□□□ -2.44
TFB5YDR079C-A ADH1P00330 348 aaKnown RBP-0.18□□□□□ -2.44
TFB5YDR079C-A COX2P00410 251 aa-0.18□□□□□ -2.44
TFB5YDR079C-A MSW1P04803 379 aa-0.18□□□□□ -2.44
TFB5YDR079C-A HAP2P06774 265 aa-0.18□□□□□ -2.44
TFB5YDR079C-A STE3P06783 470 aa-0.18□□□□□ -2.44
TFB5YDR079C-A RPB2P08518 1224 aaKnown RBP-0.18□□□□□ -2.44
TFB5YDR079C-A MSI1P13712 422 aa-0.18□□□□□ -2.44
TFB5YDR079C-A POL30P15873 258 aaKnown RBP-0.18□□□□□ -2.44
TFB5YDR079C-A COQ1P18900 473 aa-0.18□□□□□ -2.44
TFB5YDR079C-A APA2P22108 325 aa-0.18□□□□□ -2.44
TFB5YDR079C-A HYP2P23301 157 aaKnown RBP-0.18□□□□□ -2.44
TFB5YDR079C-A RRT12P25381 491 aa-0.18□□□□□ -2.44
TFB5YDR079C-A MSP1P28737 362 aa-0.18□□□□□ -2.44
TFB5YDR079C-A DBF20P32328 564 aa-0.18□□□□□ -2.44
TFB5YDR079C-A RME1P32338 300 aaKnown RBP-0.18□□□□□ -2.44
TFB5YDR079C-A ZRT1P32804 376 aa-0.18□□□□□ -2.44
TFB5YDR079C-A VMA11P32842 164 aa-0.18□□□□□ -2.44
TFB5YDR079C-A SFC1P33303 322 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YBR144CP34215 104 aa-0.18□□□□□ -2.44
TFB5YDR079C-A ZRT3P34240 503 aa-0.18□□□□□ -2.44
TFB5YDR079C-A ALY1P36117 915 aa-0.18□□□□□ -2.44
TFB5YDR079C-A MRPL15P36523 253 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YCR041WP37265 110 aa-0.18□□□□□ -2.44
TFB5YDR079C-A HMT1P38074 348 aa-0.18□□□□□ -2.44
TFB5YDR079C-A RXT2P38255 430 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YBR138CP38277 524 aa-0.18□□□□□ -2.44
TFB5YDR079C-A TSC10P38342 320 aa-0.18□□□□□ -2.44
TFB5YDR079C-A LAG1P38703 411 aa-0.18□□□□□ -2.44
TFB5YDR079C-A ARN2P38724 620 aa-0.18□□□□□ -2.44
TFB5YDR079C-A MNL1P38888 796 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YHR210CP38893 341 aa-0.18□□□□□ -2.44
TFB5YDR079C-A SWD1P39706 426 aa-0.18□□□□□ -2.44
TFB5YDR079C-A SEN34P39707 275 aa-0.18□□□□□ -2.44
TFB5YDR079C-A YAL037WP39728 267 aa-0.18□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms