RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W RMD5Q12508 421 aa4.29□□□□□ -1.72
RER1YCL001W YLR302CO13544 120 aa4.28□□□□□ -1.72
RER1YCL001W EPT1P22140 391 aa4.28□□□□□ -1.72
RER1YCL001W RER1P25560 188 aa4.28□□□□□ -1.72
RER1YCL001W RPN2P32565 945 aaKnown RBP4.28□□□□□ -1.72
RER1YCL001W UBC6P33296 250 aaPredicted RBP4.28□□□□□ -1.72
RER1YCL001W PEX5P35056 612 aa4.28□□□□□ -1.72
RER1YCL001W YPK3P38070 525 aa4.28□□□□□ -1.72
RER1YCL001W YBR139WP38109 508 aa4.28□□□□□ -1.72
RER1YCL001W MRP21P38175 177 aa4.28□□□□□ -1.72
RER1YCL001W LDB7P38210 180 aa4.28□□□□□ -1.72
RER1YCL001W YSW1P38280 609 aa4.28□□□□□ -1.72
RER1YCL001W SMF2P38778 549 aa4.28□□□□□ -1.72
RER1YCL001W TIM17P39515 158 aa4.28□□□□□ -1.72
RER1YCL001W YER010CP40011 234 aa4.28□□□□□ -1.72
RER1YCL001W YFR018CP43599 363 aa4.28□□□□□ -1.72
RER1YCL001W NBP35P52920 328 aa4.28□□□□□ -1.72
RER1YCL001W SLT2Q00772 484 aa4.28□□□□□ -1.72
RER1YCL001W REG1Q00816 1014 aa4.28□□□□□ -1.72
RER1YCL001W RPN8Q08723 338 aaKnown RBP4.28□□□□□ -1.72
RER1YCL001W ERG27Q12452 347 aaKnown RBP4.28□□□□□ -1.72
RER1YCL001W SPT15P13393 240 aaKnown RBP4.27□□□□□ -1.73
RER1YCL001W SCL1P21243 252 aaKnown RBP4.27□□□□□ -1.73
RER1YCL001W YSR3P23501 404 aa4.27□□□□□ -1.73
RER1YCL001W MGT1P26188 188 aa4.27□□□□□ -1.73
RER1YCL001W URA7P28274 579 aaKnown RBP4.27□□□□□ -1.73
RER1YCL001W URA10P30402 227 aa4.27□□□□□ -1.73
RER1YCL001W TPS2P31688 896 aaKnown RBP4.27□□□□□ -1.73
RER1YCL001W TFC3P34111 1160 aa4.27□□□□□ -1.73
RER1YCL001W STB6P36085 766 aa4.27□□□□□ -1.73
RER1YCL001W MUM2P38236 366 aa4.27□□□□□ -1.73
RER1YCL001W YBP1P38315 674 aa4.27□□□□□ -1.73
RER1YCL001W RRP3P38712 501 aaKnown RBP4.27□□□□□ -1.73
RER1YCL001W IME4P41833 600 aa4.27□□□□□ -1.73
RER1YCL001W FET5P43561 622 aa4.27□□□□□ -1.73
RER1YCL001W PET130P47065 347 aa4.27□□□□□ -1.73
RER1YCL001W DCP2P53550 970 aaKnown RBP4.27□□□□□ -1.73
RER1YCL001W YNL234WP53857 426 aa4.27□□□□□ -1.73
RER1YCL001W VAC7P53950 1165 aa4.27□□□□□ -1.73
RER1YCL001W PET117Q02771 107 aa4.27□□□□□ -1.73
RER1YCL001W SWA2Q06677 668 aa4.27□□□□□ -1.73
RER1YCL001W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
RER1YCL001W SMF3Q12078 473 aaPredicted RBP4.27□□□□□ -1.73
RER1YCL001W LDB17Q12342 491 aa4.27□□□□□ -1.73
RER1YCL001W GTT2Q12390 233 aa4.27□□□□□ -1.73
RER1YCL001W UBR1P19812 1950 aa4.27□□□□□ -1.73
RER1YCL001W IRA2P19158 3079 aa4.27□□□□□ -1.73
RER1YCL001W CPA1P07258 411 aaKnown RBP4.26□□□□□ -1.73
RER1YCL001W BAR1P12630 587 aa4.26□□□□□ -1.73
RER1YCL001W HEM15P16622 393 aa4.26□□□□□ -1.73
RER1YCL001W CBF1P17106 351 aa4.26□□□□□ -1.73
RER1YCL001W ERG8P24521 451 aa4.26□□□□□ -1.73
RER1YCL001W YCL068CP25593 260 aa4.26□□□□□ -1.73
RER1YCL001W RRP1P35178 278 aaPredicted RBP4.26□□□□□ -1.73
RER1YCL001W MRPL37P36532 105 aa4.26□□□□□ -1.73
RER1YCL001W MAK5P38112 773 aaPredicted RBP4.26□□□□□ -1.73
RER1YCL001W CYC2P38909 366 aa4.26□□□□□ -1.73
RER1YCL001W ALG8P40351 577 aa4.26□□□□□ -1.73
RER1YCL001W PFK26P40433 827 aaKnown RBP4.26□□□□□ -1.73
RER1YCL001W YPS6P40583 537 aa4.26□□□□□ -1.73
RER1YCL001W BIR1P47134 954 aa4.26□□□□□ -1.73
RER1YCL001W FRE4P53746 719 aa4.26□□□□□ -1.73
RER1YCL001W SPP2Q02521 185 aa4.26□□□□□ -1.73
RER1YCL001W SNO4Q04902 237 aa4.26□□□□□ -1.73
RER1YCL001W RSF1Q05043 376 aa4.26□□□□□ -1.73
RER1YCL001W CRN1Q06440 651 aa4.26□□□□□ -1.73
RER1YCL001W NOP6Q07623 225 aaKnown RBP4.26□□□□□ -1.73
RER1YCL001W PLB3Q08108 686 aa4.26□□□□□ -1.73
RER1YCL001W HSP33Q08914 237 aaKnown RBP4.26□□□□□ -1.73
RER1YCL001W HSP32Q08992 237 aa4.26□□□□□ -1.73
RER1YCL001W YOR012WQ12351 137 aa4.26□□□□□ -1.73
RER1YCL001W VCX1Q99385 411 aa4.26□□□□□ -1.73
RER1YCL001W GPA2P10823 449 aa4.25□□□□□ -1.73
RER1YCL001W MCM10P32354 571 aa4.25□□□□□ -1.73
RER1YCL001W SPR1P32603 445 aa4.25□□□□□ -1.73
RER1YCL001W PRP18P33411 251 aaPredicted RBP4.25□□□□□ -1.73
RER1YCL001W PSD1P39006 500 aa4.25□□□□□ -1.73
RER1YCL001W ELO1P39540 310 aa4.25□□□□□ -1.73
RER1YCL001W INA22P40576 216 aa4.25□□□□□ -1.73
RER1YCL001W YNL320WP42840 284 aa4.25□□□□□ -1.73
RER1YCL001W YFL012WP43580 148 aa4.25□□□□□ -1.73
RER1YCL001W ZRG17P53735 605 aa4.25□□□□□ -1.73
RER1YCL001W SVL3Q03088 825 aaKnown RBP4.25□□□□□ -1.73
RER1YCL001W CTL1Q03220 320 aaKnown RBP4.25□□□□□ -1.73
RER1YCL001W VPS60Q03390 229 aa4.25□□□□□ -1.73
RER1YCL001W YMR027WQ04371 470 aa4.25□□□□□ -1.73
RER1YCL001W YML096WQ04489 525 aa4.25□□□□□ -1.73
RER1YCL001W CDC123Q05791 360 aa4.25□□□□□ -1.73
RER1YCL001W SEM1O94742 89 aa4.24□□□□□ -1.73
RER1YCL001W CDC8P00572 216 aa4.24□□□□□ -1.73
RER1YCL001W RAD1P06777 1100 aa4.24□□□□□ -1.73
RER1YCL001W CHO1P08456 276 aa4.24□□□□□ -1.73
RER1YCL001W RPL1AP0CX43 217 aaKnown RBP4.24□□□□□ -1.73
RER1YCL001W RPL1BP0CX44 217 aaKnown RBP4.24□□□□□ -1.73
RER1YCL001W AMD1P15274 810 aaKnown RBP4.24□□□□□ -1.73
RER1YCL001W HSP26P15992 214 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
RER1YCL001W PPH21P23594 369 aa4.24□□□□□ -1.73
RER1YCL001W RIM1P32445 135 aaKnown RBP4.24□□□□□ -1.73
RER1YCL001W SRB5P32585 307 aa4.24□□□□□ -1.73
RER1YCL001W PDR3P33200 976 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms