RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C RPC53P25441 422 aa2.34□□□□□ -2.03
TRS20YBR254C YCR051WP25631 222 aa2.34□□□□□ -2.03
TRS20YBR254C ADK2P26364 225 aa2.34□□□□□ -2.03
TRS20YBR254C VMA8P32610 256 aaKnown RBP2.34□□□□□ -2.03
TRS20YBR254C NTC20P38302 140 aaPredicted RBP2.34□□□□□ -2.03
TRS20YBR254C SRP72P38688 640 aaKnown RBP2.34□□□□□ -2.03
TRS20YBR254C RRP4P38792 359 aaKnown RBP2.34□□□□□ -2.03
TRS20YBR254C ALD5P40047 520 aaKnown RBP2.34□□□□□ -2.03
TRS20YBR254C YML6P51998 286 aa2.34□□□□□ -2.03
TRS20YBR254C YPS5P53057 165 aa2.34□□□□□ -2.03
TRS20YBR254C RRP45Q05636 305 aaKnown RBP2.34□□□□□ -2.03
TRS20YBR254C PRM7Q12459 698 aa2.34□□□□□ -2.03
TRS20YBR254C DPH5P32469 300 aaPredicted RBP2.33□□□□□ -2.04
TRS20YBR254C CYS4P32582 507 aaKnown RBP2.33□□□□□ -2.04
TRS20YBR254C ANR2P36090 516 aaPredicted RBP2.33□□□□□ -2.04
TRS20YBR254C LCB3P47013 409 aa2.33□□□□□ -2.04
TRS20YBR254C COS5P47187 383 aa2.33□□□□□ -2.04
TRS20YBR254C MDM36Q06820 579 aa2.33□□□□□ -2.04
TRS20YBR254C COS7Q07788 383 aa2.33□□□□□ -2.04
TRS20YBR254C RFM1Q12192 310 aa2.33□□□□□ -2.04
TRS20YBR254C YRF1-4O13559 1382 aa2.33□□□□□ -2.04
TRS20YBR254C HOM3P10869 527 aa2.32□□□□□ -2.04
TRS20YBR254C TFB1P32776 642 aa2.32□□□□□ -2.04
TRS20YBR254C GPI18P38211 433 aa2.32□□□□□ -2.04
TRS20YBR254C YHK8P38776 514 aa2.32□□□□□ -2.04
TRS20YBR254C AIM24P47127 394 aa2.32□□□□□ -2.04
TRS20YBR254C ATP22P50273 684 aaPredicted RBP2.32□□□□□ -2.04
TRS20YBR254C YGL262WP53054 175 aa2.32□□□□□ -2.04
TRS20YBR254C YGL138CP53122 345 aa2.32□□□□□ -2.04
TRS20YBR254C YGR250CP53316 781 aaKnown RBP2.32□□□□□ -2.04
TRS20YBR254C VPS9P54787 451 aa2.32□□□□□ -2.04
TRS20YBR254C KAP120Q02932 1032 aa2.32□□□□□ -2.04
TRS20YBR254C RMT2Q03305 412 aa2.32□□□□□ -2.04
TRS20YBR254C TDA1Q03533 586 aa2.32□□□□□ -2.04
TRS20YBR254C YDR131CQ03899 556 aa2.32□□□□□ -2.04
TRS20YBR254C SXM1Q04175 944 aaKnown RBP2.32□□□□□ -2.04
TRS20YBR254C ROY1Q04847 553 aa2.32□□□□□ -2.04
TRS20YBR254C DON1Q05610 365 aa2.32□□□□□ -2.04
TRS20YBR254C MFG1Q07684 458 aa2.32□□□□□ -2.04
TRS20YBR254C NAG1Q8TGN9 163 aa2.32□□□□□ -2.04
TRS20YBR254C AFI1Q99222 893 aa2.32□□□□□ -2.04
TRS20YBR254C YME2P32843 850 aa2.31□□□□□ -2.04
TRS20YBR254C YBR056WP38081 501 aa2.31□□□□□ -2.04
TRS20YBR254C RRN10P38204 145 aa2.31□□□□□ -2.04
TRS20YBR254C HAC1P41546 238 aa2.31□□□□□ -2.04
TRS20YBR254C ERB1Q04660 807 aaKnown RBP2.31□□□□□ -2.04
TRS20YBR254C SNT309Q06091 175 aaPredicted RBP2.31□□□□□ -2.04
TRS20YBR254C SMC5Q08204 1093 aa2.31□□□□□ -2.04
TRS20YBR254C ATG34Q12292 412 aa2.31□□□□□ -2.04
TRS20YBR254C IMA3P0CW40 589 aa2.3□□□□□ -2.04
TRS20YBR254C IMA4P0CW41 589 aa2.3□□□□□ -2.04
TRS20YBR254C CAP2P13517 287 aa2.3□□□□□ -2.04
TRS20YBR254C CPR2P23285 205 aa2.3□□□□□ -2.04
TRS20YBR254C EXG1P23776 448 aaKnown RBP2.3□□□□□ -2.04
TRS20YBR254C ZIM17P42844 174 aa2.3□□□□□ -2.04
TRS20YBR254C RSC1P53236 928 aa2.3□□□□□ -2.04
TRS20YBR254C COS1P53822 381 aa2.3□□□□□ -2.04
TRS20YBR254C BNI5P53890 448 aaKnown RBP2.3□□□□□ -2.04
TRS20YBR254C TPS1Q00764 495 aaKnown RBP2.3□□□□□ -2.04
TRS20YBR254C CIK1Q01649 594 aa2.3□□□□□ -2.04
TRS20YBR254C SKO1Q02100 647 aa2.3□□□□□ -2.04
TRS20YBR254C YMR102CQ03177 834 aa2.3□□□□□ -2.04
TRS20YBR254C ARX1Q03862 593 aaKnown RBP2.3□□□□□ -2.04
TRS20YBR254C URH1Q04179 340 aa2.3□□□□□ -2.04
TRS20YBR254C RRP9Q06506 573 aaKnown RBP2.3□□□□□ -2.04
TRS20YBR254C IMA2Q08295 589 aa2.3□□□□□ -2.04
TRS20YBR254C CLB1P24868 471 aa2.29□□□□□ -2.04
TRS20YBR254C ERV1P27882 189 aa2.29□□□□□ -2.04
TRS20YBR254C URA7P28274 579 aaKnown RBP2.29□□□□□ -2.04
TRS20YBR254C BLI1P35727 113 aa2.29□□□□□ -2.04
TRS20YBR254C MRPL27P36526 146 aaPredicted RBP2.29□□□□□ -2.04
TRS20YBR254C DTR1P38125 572 aa2.29□□□□□ -2.04
TRS20YBR254C LRP1P38801 184 aaKnown RBP2.29□□□□□ -2.04
TRS20YBR254C PFS2P42841 465 aaKnown RBP2.29□□□□□ -2.04
TRS20YBR254C CAK1P43568 368 aaPredicted RBP2.29□□□□□ -2.04
TRS20YBR254C BUD27P43573 796 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
TRS20YBR254C HOT1Q03213 719 aa2.29□□□□□ -2.04
TRS20YBR254C DIS3Q08162 1001 aaKnown RBP2.29□□□□□ -2.04
TRS20YBR254C VPS54Q12071 889 aa2.29□□□□□ -2.04
TRS20YBR254C EAF3Q12432 401 aa2.29□□□□□ -2.04
TRS20YBR254C RAX2Q12465 1220 aa2.29□□□□□ -2.04
TRS20YBR254C ZRC1P20107 442 aa2.28□□□□□ -2.04
TRS20YBR254C MNE1P24720 663 aa2.28□□□□□ -2.04
TRS20YBR254C DPH2P32461 534 aa2.28□□□□□ -2.04
TRS20YBR254C FMT1P32785 401 aa2.28□□□□□ -2.04
TRS20YBR254C STP2P38704 541 aa2.28□□□□□ -2.04
TRS20YBR254C MAM33P40513 266 aa2.28□□□□□ -2.04
TRS20YBR254C YIP5P53108 310 aa2.28□□□□□ -2.04
TRS20YBR254C HST1P53685 503 aa2.28□□□□□ -2.04
TRS20YBR254C RCF1Q03713 159 aa2.28□□□□□ -2.04
TRS20YBR254C YLR345WQ06137 509 aa2.28□□□□□ -2.04
TRS20YBR254C PIN3Q06449 215 aa2.28□□□□□ -2.04
TRS20YBR254C MED2Q12124 431 aa2.28□□□□□ -2.04
TRS20YBR254C FOL3Q12676 427 aaPredicted RBP2.28□□□□□ -2.04
TRS20YBR254C TY1B-AO13527 1196 aaKnown RBP2.27□□□□□ -2.05
TRS20YBR254C MDH1P17505 334 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
TRS20YBR254C BRF1P29056 596 aa2.27□□□□□ -2.05
TRS20YBR254C MMS4P38257 691 aa2.27□□□□□ -2.05
TRS20YBR254C PFS1P38872 237 aa2.27□□□□□ -2.05
TRS20YBR254C GDI1P39958 451 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms