RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W FRE4P53746 719 aa4.47□□□□□ -1.69
CKS1YBR135W RHO5P53879 331 aaKnown RBP4.47□□□□□ -1.69
CKS1YBR135W PIR3Q03180 325 aa4.47□□□□□ -1.69
CKS1YBR135W MLP1Q02455 1875 aaKnown RBP4.47□□□□□ -1.69
CKS1YBR135W SPT7P35177 1332 aa4.46□□□□□ -1.69
CKS1YBR135W YRF1-3P0CX14 1859 aa4.46□□□□□ -1.7
CKS1YBR135W YRF1-7P0CX15 1859 aa4.46□□□□□ -1.7
CKS1YBR135W YRF1-6P53819 1859 aa4.46□□□□□ -1.7
CKS1YBR135W MLH1P38920 769 aa4.46□□□□□ -1.7
CKS1YBR135W YDL186WP48568 277 aa4.46□□□□□ -1.7
CKS1YBR135W CAF40P53829 373 aa4.46□□□□□ -1.7
CKS1YBR135W CRZ1P53968 678 aa4.46□□□□□ -1.7
CKS1YBR135W URH1Q04179 340 aa4.46□□□□□ -1.7
CKS1YBR135W YMR317WQ04893 1140 aa4.46□□□□□ -1.7
CKS1YBR135W SNT309Q06091 175 aaPredicted RBP4.46□□□□□ -1.7
CKS1YBR135W NDL1Q06568 189 aa4.46□□□□□ -1.7
CKS1YBR135W NDD1Q08887 554 aa4.46□□□□□ -1.7
CKS1YBR135W ATG34Q12292 412 aa4.46□□□□□ -1.7
CKS1YBR135W YIL177CP40434 1758 aa4.45□□□□□ -1.7
CKS1YBR135W YJL225CP40889 1758 aa4.45□□□□□ -1.7
CKS1YBR135W ARG4P04076 463 aaPredicted RBP4.45□□□□□ -1.7
CKS1YBR135W IMA3P0CW40 589 aa4.45□□□□□ -1.7
CKS1YBR135W IMA4P0CW41 589 aa4.45□□□□□ -1.7
CKS1YBR135W ALG1P16661 449 aa4.45□□□□□ -1.7
CKS1YBR135W MCK1P21965 375 aaKnown RBP4.45□□□□□ -1.7
CKS1YBR135W RAD57P25301 460 aa4.45□□□□□ -1.7
CKS1YBR135W ITR1P30605 584 aa4.45□□□□□ -1.7
CKS1YBR135W HSP104P31539 908 aaKnown RBP4.45□□□□□ -1.7
CKS1YBR135W MST28P39552 234 aa4.45□□□□□ -1.7
CKS1YBR135W YJL213WP40896 331 aa4.45□□□□□ -1.7
CKS1YBR135W MLC1P53141 149 aa4.45□□□□□ -1.7
CKS1YBR135W YGR016WP53209 190 aa4.45□□□□□ -1.7
CKS1YBR135W EOS1P53938 366 aa4.45□□□□□ -1.7
CKS1YBR135W YPL107WQ02873 248 aa4.45□□□□□ -1.7
CKS1YBR135W RSN1Q03516 953 aa4.45□□□□□ -1.7
CKS1YBR135W IMA2Q08295 589 aa4.45□□□□□ -1.7
CKS1YBR135W TIM18Q08749 192 aa4.45□□□□□ -1.7
CKS1YBR135W MUM3Q08750 479 aa4.45□□□□□ -1.7
CKS1YBR135W PKH2Q12236 1081 aaKnown RBP4.45□□□□□ -1.7
CKS1YBR135W FRE6Q12473 712 aa4.45□□□□□ -1.7
CKS1YBR135W PDE2P06776 526 aa4.44□□□□□ -1.7
CKS1YBR135W SAM1P10659 382 aaKnown RBP4.44□□□□□ -1.7
CKS1YBR135W SAM2P19358 384 aaKnown RBP4.44□□□□□ -1.7
CKS1YBR135W GPI16P38875 610 aa4.44□□□□□ -1.7
CKS1YBR135W PCF11P39081 626 aaPredicted RBP4.44□□□□□ -1.7
CKS1YBR135W CAJ1P39101 391 aa4.44□□□□□ -1.7
CKS1YBR135W PPM1Q04081 328 aa4.44□□□□□ -1.7
CKS1YBR135W YPL199CQ08954 240 aa4.44□□□□□ -1.7
CKS1YBR135W SNF2P22082 1703 aa4.43□□□□□ -1.7
CKS1YBR135W SIR4P11978 1358 aa4.43□□□□□ -1.7
CKS1YBR135W TEF1P02994 458 aaKnown RBP4.43□□□□□ -1.7
CKS1YBR135W PRP16P15938 1071 aaPredicted RBP4.43□□□□□ -1.7
CKS1YBR135W SPO12P17123 173 aa4.43□□□□□ -1.7
CKS1YBR135W TPM1P17536 199 aaKnown RBP4.43□□□□□ -1.7
CKS1YBR135W MSP1P28737 362 aa4.43□□□□□ -1.7
CKS1YBR135W PFF1P38244 976 aa4.43□□□□□ -1.7
CKS1YBR135W YAT2P40017 923 aa4.43□□□□□ -1.7
CKS1YBR135W SNM1P40993 198 aa4.43□□□□□ -1.7
CKS1YBR135W PHB2P50085 310 aa4.43□□□□□ -1.7
CKS1YBR135W YDR541CQ03049 344 aa4.43□□□□□ -1.7
CKS1YBR135W BET5Q03630 159 aa4.43□□□□□ -1.7
CKS1YBR135W SRL2Q12020 392 aa4.43□□□□□ -1.7
CKS1YBR135W RAD61Q99359 647 aa4.43□□□□□ -1.7
CKS1YBR135W GDH1P07262 454 aaKnown RBP4.42□□□□□ -1.7
CKS1YBR135W CYS4P32582 507 aaKnown RBP4.42□□□□□ -1.7
CKS1YBR135W YSW1P38280 609 aa4.42□□□□□ -1.7
CKS1YBR135W STP2P38704 541 aa4.42□□□□□ -1.7
CKS1YBR135W LAM5P43560 674 aa4.42□□□□□ -1.7
CKS1YBR135W PIB2P53191 635 aa4.42□□□□□ -1.7
CKS1YBR135W WSC2P53832 503 aa4.42□□□□□ -1.7
CKS1YBR135W NSE1Q07913 336 aa4.42□□□□□ -1.7
CKS1YBR135W PPT2Q12036 173 aa4.42□□□□□ -1.7
CKS1YBR135W SMF3Q12078 473 aaPredicted RBP4.42□□□□□ -1.7
CKS1YBR135W NFI1Q12216 726 aa4.42□□□□□ -1.7
CKS1YBR135W RRP12Q12754 1228 aaKnown RBP4.42□□□□□ -1.7
CKS1YBR135W YBR298C-AQ8TGK4 73 aa4.42□□□□□ -1.7
CKS1YBR135W CHS1P08004 1131 aa4.41□□□□□ -1.7
CKS1YBR135W PHO91P27514 894 aa4.41□□□□□ -1.7
CKS1YBR135W PRO3P32263 286 aaKnown RBP4.41□□□□□ -1.7
CKS1YBR135W AGA1P32323 725 aa4.41□□□□□ -1.7
CKS1YBR135W DAD2P36162 133 aa4.41□□□□□ -1.7
CKS1YBR135W MRPL4P36517 319 aa4.41□□□□□ -1.7
CKS1YBR135W ADH5P38113 351 aaKnown RBP4.41□□□□□ -1.7
CKS1YBR135W MIX23P38162 196 aa4.41□□□□□ -1.7
CKS1YBR135W GDT1P38301 280 aaPredicted RBP4.41□□□□□ -1.7
CKS1YBR135W INM1P38710 295 aa4.41□□□□□ -1.7
CKS1YBR135W CHS6P40955 746 aa4.41□□□□□ -1.7
CKS1YBR135W BRO1P48582 844 aa4.41□□□□□ -1.7
CKS1YBR135W ROG1P53118 685 aa4.41□□□□□ -1.7
CKS1YBR135W MSO1P53604 210 aaKnown RBP4.41□□□□□ -1.7
CKS1YBR135W IBD2P53892 351 aa4.41□□□□□ -1.7
CKS1YBR135W THP3Q12049 470 aaKnown RBP4.41□□□□□ -1.7
CKS1YBR135W TIP41Q12199 356 aa4.41□□□□□ -1.7
CKS1YBR135W MHP1P43638 1398 aa4.4□□□□□ -1.7
CKS1YBR135W RPL6BP05739 176 aaKnown RBP4.4□□□□□ -1.71
CKS1YBR135W DAP2P18962 818 aa4.4□□□□□ -1.71
CKS1YBR135W POT1P27796 417 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
CKS1YBR135W NRP1P32770 719 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
CKS1YBR135W KKQ8P36004 724 aa4.4□□□□□ -1.71
CKS1YBR135W EBP2P36049 427 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms