RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 Q4G0T1 1027 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 NFRKBQ6P4R8 1299 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 SH3RF1Q7Z6J0 888 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 LAPTM4BQ86VI4 370 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 PLA2G4DQ86XP0 818 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 TRIM43Q96BQ3 446 aaPredicted RBP10.97□□□□□ -0.65
SRP54-210ENST00000556380 PDLIM7Q9NR12 457 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 ZMYND8Q9ULU4 1186 aaPredicted RBP10.97□□□□□ -0.65
SRP54-210ENST00000556380 TRIOBPQ9H2D6 2365 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 IPO5O00410 1097 aaKnown RBP10.96□□□□□ -0.65
SRP54-210ENST00000556380 MSH4O15457 936 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 ATG7O95352 703 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 CCNE2O96020 404 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 ZNF286BP0CG31 522 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 ITGB8P26012 769 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 KRT2P35908 639 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 PTPN11Q06124 597 aaPredicted RBP10.96□□□□□ -0.65
SRP54-210ENST00000556380 NONOQ15233 471 aaKnown RBP eCLIP10.96□□□□□ -0.65
SRP54-210ENST00000556380 INF2Q27J81 1249 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 PRR16Q569H4 304 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 MOXD1Q6UVY6 613 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 SESTD1Q86VW0 696 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 DIS3L2Q8IYB7 885 aaKnown RBP10.96□□□□□ -0.65
SRP54-210ENST00000556380 ANKK1Q8NFD2 765 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 PPP1R13LQ8WUF5 828 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 SEPT1Q8WYJ6 367 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 C8orf76Q96K31 380 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 CTAGE1Q96RT6 745 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 PCYT2Q99447 389 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 TRPV6Q9H1D0 765 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 PRO3102Q9H379 93 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 PKD2L1Q9P0L9 805 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 TBX21Q9UL17 535 aa10.96□□□□□ -0.65
SRP54-210ENST00000556380 MROH7Q68CQ1 1323 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 CCDC194A0A1B0GVG4 234 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 DCDC2CA8MYV0 355 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 LGR5O75473 907 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 TDP2O95551 362 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 LGALS2P05162 132 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 CLTBP09497 229 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 HOXC8P31273 242 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 ACTR2P61160 394 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 SETQ01105 290 aaPredicted RBP10.95□□□□□ -0.66
SRP54-210ENST00000556380 GUCY1B3Q02153 619 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 HIC1Q14526 733 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 PPP4R3AQ6IN85 833 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 PIK3AP1Q6ZUJ8 805 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 SLC5A5Q92911 643 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 SNX21Q969T3 373 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 UIMC1Q96RL1 719 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 SDF4Q9BRK5 362 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 ZNF577Q9BSK1 485 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 JPH1Q9HDC5 661 aaPredicted RBP10.95□□□□□ -0.66
SRP54-210ENST00000556380 SLC9A2Q9UBY0 812 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 SEPT9Q9UHD8 586 aaPredicted RBP10.95□□□□□ -0.66
SRP54-210ENST00000556380 MYH7BA7E2Y1 1941 aa10.95□□□□□ -0.66
SRP54-210ENST00000556380 IGKV6D-21A0A0A0MT36 114 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 GRXCR2A6NFK2 248 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 H3BRB1 525 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 NOP56O00567 594 aaKnown RBP10.94□□□□□ -0.66
SRP54-210ENST00000556380 WNT7AO00755 349 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 B4GALT4O60513 344 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 SYN1P17600 705 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 SP4Q02446 784 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 TRIM29Q14134 588 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 KIAA0753Q2KHM9 967 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 B3GNT9Q6UX72 402 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 ABHD15Q6UXT9 468 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 NEK8Q86SG6 692 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 TRIM50Q86XT4 487 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 FAM184AQ8NB25 1140 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 ETNPPLQ8TBG4 499 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 ZFRQ96KR1 1074 aaKnown RBP10.94□□□□□ -0.66
SRP54-210ENST00000556380 GDF15Q99988 308 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 FOXP1Q9H334 677 aaPredicted RBP10.94□□□□□ -0.66
SRP54-210ENST00000556380 TUT1Q9H6E5 874 aaKnown RBP10.94□□□□□ -0.66
SRP54-210ENST00000556380 BRMS1Q9HCU9 246 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 TBC1D22BQ9NU19 505 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 TRMT13Q9NUP7 481 aaKnown RBP10.94□□□□□ -0.66
SRP54-210ENST00000556380 TMEM39AQ9NV64 488 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 HDAC6Q9UBN7 1215 aa10.94□□□□□ -0.66
SRP54-210ENST00000556380 KIF28PB7ZC32 967 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 SLC37A4O43826 429 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 PSMD10O75832 226 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 U2AF2P26368 475 aaKnown RBP eCLIP10.93□□□□□ -0.666e-10■■□□□ 11.8
SRP54-210ENST00000556380 GJB2P29033 226 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 TCF7P36402 384 aaPredicted RBP10.93□□□□□ -0.66
SRP54-210ENST00000556380 MAGEA10P43363 369 aaPredicted RBP10.93□□□□□ -0.66
SRP54-210ENST00000556380 LETM2Q2VYF4 491 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 UTP14CQ5TAP6 766 aaKnown RBP10.93□□□□□ -0.66
SRP54-210ENST00000556380 GDF6Q6KF10 455 aaPredicted RBP10.93□□□□□ -0.66
SRP54-210ENST00000556380 ZNF746Q6NUN9 644 aaPredicted RBP10.93□□□□□ -0.66
SRP54-210ENST00000556380 HAS1Q92839 578 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 GJA10Q969M2 543 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 RIT2Q99578 217 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 KATNAL1Q9BW62 490 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 RNPEPQ9H4A4 650 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 KCNMB3Q9NPA1 279 aa10.93□□□□□ -0.66
SRP54-210ENST00000556380 DDX25Q9UHL0 483 aaKnown RBP10.93□□□□□ -0.66
SRP54-210ENST00000556380 EMSYQ7Z589 1322 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms