RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 C16orf86Q6ZW13 317 aa7.69□□□□□ -1.18
SEC22C-215ENST00000487701 PRRT2Q7Z6L0 340 aaPredicted RBP7.69□□□□□ -1.18
SEC22C-215ENST00000487701 IL25Q9H293 177 aa7.69□□□□□ -1.18
SEC22C-215ENST00000487701 ARPP21Q9UBL0 812 aaPredicted RBP7.69□□□□□ -1.18
SEC22C-215ENST00000487701 ZNFX1Q9P2E3 1918 aaKnown RBP7.69□□□□□ -1.18
SEC22C-215ENST00000487701 ADGRA2Q96PE1 1338 aa7.69□□□□□ -1.18
SEC22C-215ENST00000487701 SMCHD1A6NHR9 2005 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 TMEM238LA0A1B0GVL6 79 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 PATL2C9JE40 543 aaKnown RBP7.68□□□□□ -1.18
SEC22C-215ENST00000487701 TREHO43280 583 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 DLGAP3O95886 979 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 CENPBP07199 599 aaPredicted RBP7.68□□□□□ -1.18
SEC22C-215ENST00000487701 AKR1B1P15121 316 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 GNAT2P19087 354 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 SDSP20132 328 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 MAOBP27338 520 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 TDO2P48775 406 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 CDK8P49336 464 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 HMGCS2P54868 508 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 CAP1Q01518 475 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 SPP2Q13103 211 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 TAF1CQ15572 869 aaPredicted RBP7.68□□□□□ -1.18
SEC22C-215ENST00000487701 ABCB5Q2M3G0 1257 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 CERKLQ49MI3 558 aaPredicted RBP7.68□□□□□ -1.18
SEC22C-215ENST00000487701 SBK1Q52WX2 424 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 TREML2Q5T2D2 321 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 CENPQQ7L2Z9 268 aaPredicted RBP7.68□□□□□ -1.18
SEC22C-215ENST00000487701 ANKRD23Q86SG2 305 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 TICAM2Q86XR7 235 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 CLEC10AQ8IUN9 316 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 IFNL3Q8IZI9 196 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 ZNF296Q8WUU4 475 aaPredicted RBP7.68□□□□□ -1.18
SEC22C-215ENST00000487701 CORO1BQ9BR76 489 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 WDR18Q9BV38 432 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 TMPRSS13Q9BYE2 586 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 KRTAP9-2Q9BYQ4 174 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 HELLSQ9NRZ9 838 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 GINM1Q9NU53 330 aa7.68□□□□□ -1.18
SEC22C-215ENST00000487701 HMX2A2RU54 273 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 MEGF11A6BM72 1044 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.67□□□□□ -1.18
SEC22C-215ENST00000487701 MINDY4BA8MYZ0 360 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 PDHXO00330 501 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 GSC2O15499 205 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 B3GALT4O96024 378 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 APPP05067 770 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 MAPK8P45983 427 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 SEPT2Q15019 361 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 RAB3GAP1Q15042 981 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 POU4F3Q15319 338 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 MCMDC2Q4G0Z9 681 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 EXOSC6Q5RKV6 272 aaKnown RBP7.67□□□□□ -1.18
SEC22C-215ENST00000487701 HP1BP3Q5SSJ5 553 aaPredicted RBP7.67□□□□□ -1.18
SEC22C-215ENST00000487701 OTUD7BQ6GQQ9 843 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 DTHD1Q6ZMT9 781 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 GADL1Q6ZQY3 521 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 TRIM42Q8IWZ5 723 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 FAM20CQ8IXL6 584 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 STK11IPQ8N1F8 1099 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 ACER1Q8TDN7 264 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 C7orf69Q9H7B7 122 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 ZCCHC17Q9NP64 241 aaKnown RBP7.67□□□□□ -1.18
SEC22C-215ENST00000487701 PPP4R2Q9NY27 417 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 SWAP70Q9UH65 585 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 TACC3Q9Y6A5 838 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 MYH6P13533 1939 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 CCDC171Q6TFL3 1326 aa7.67□□□□□ -1.18
SEC22C-215ENST00000487701 A0A1W2PRG0 241 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 MPHOSPH10O00566 681 aaKnown RBP7.66□□□□□ -1.18
SEC22C-215ENST00000487701 IGLV1-40P01703 118 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 CYP2C8P10632 490 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 HSPD1P10809 573 aaKnown RBP7.66□□□□□ -1.18
SEC22C-215ENST00000487701 FCGRTP55899 365 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 BACE1P56817 501 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 PPARAQ07869 468 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 LRP8Q14114 963 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 DSC3Q14574 896 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 ENOX2Q16206 610 aaKnown RBP7.66□□□□□ -1.18
SEC22C-215ENST00000487701 CWC27Q6UX04 472 aaKnown RBP7.66□□□□□ -1.18
SEC22C-215ENST00000487701 BEND4Q6ZU67 534 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 FASTKD5Q7L8L6 764 aaKnown RBP7.66□□□□□ -1.18
SEC22C-215ENST00000487701 SIAH1Q8IUQ4 282 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 AMOTL1Q8IY63 956 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 SMG8Q8ND04 991 aaKnown RBP7.66□□□□□ -1.18
SEC22C-215ENST00000487701 CCDC136Q96JN2 1154 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 NACAP1Q9BZK3 213 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 NAPBQ9H115 298 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 SUGCTQ9HAC7 445 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 AS3MTQ9HBK9 375 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 DIAPH3Q9NSV4 1193 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 AGTPBP1Q9UPW5 1226 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 HIF3AQ9Y2N7 669 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 BRCA2P51587 3418 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 RBBP6Q7Z6E9 1792 aaKnown RBP7.66□□□□□ -1.18
SEC22C-215ENST00000487701 PLXNA1Q9UIW2 1896 aa7.66□□□□□ -1.18
SEC22C-215ENST00000487701 TLR2O60603 784 aa7.65□□□□□ -1.18
SEC22C-215ENST00000487701 FKTNO75072 461 aa7.65□□□□□ -1.18
SEC22C-215ENST00000487701 PRDM1O75626 825 aa7.65□□□□□ -1.18
SEC22C-215ENST00000487701 ZMYM6O95789 1325 aa7.65□□□□□ -1.18
SEC22C-215ENST00000487701 FGAP02671 866 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms