RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 CYP39A1Q9NYL5 469 aa6.58□□□□□ -1.36
PROM1-201ENST00000447510 A0A087WUV0 522 aaPredicted RBP6.57□□□□□ -1.36
PROM1-201ENST00000447510 SLC15A5A6NIM6 579 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 FAM155AB1AL88 458 aaPredicted RBP6.57□□□□□ -1.36
PROM1-201ENST00000447510 KIF28PB7ZC32 967 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 GCFC2P16383 781 aaKnown RBP6.57□□□□□ -1.36
PROM1-201ENST00000447510 PTPREP23469 700 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 CALRP27797 417 aaKnown RBP6.57□□□□□ -1.36
PROM1-201ENST00000447510 CDC25BP30305 580 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 FLT3LGP49771 235 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 PTGDRQ13258 359 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 MTMR1Q13613 665 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 KRT79Q5XKE5 535 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 CALML4Q96GE6 196 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 USP28Q96RU2 1077 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 WDR24Q96S15 920 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 PCDHA12Q9UN75 941 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 ECM29Q5VYK3 1845 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 CAVIN2O95810 425 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 OR52Z1P0C646 297 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 MAP2K5Q13163 448 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 CEP55Q53EZ4 464 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 FKBP15Q5T1M5 1219 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 KIRREL3Q8IZU9 778 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 N4BP2L2Q92802 583 aaPredicted RBP6.57□□□□□ -1.36
PROM1-201ENST00000447510 ZHX3Q9H4I2 956 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 LAMB1P07942 1786 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 TDP2O95551 362 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 PEX19P40855 299 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 RESTQ13127 1097 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 TTLL4Q14679 1199 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 ATL3Q6DD88 541 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 SAMD3Q8N6K7 520 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 AFAP1L1Q8TED9 768 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 GLG1Q92896 1179 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 MTMR8Q96EF0 704 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 TEKT3Q9BXF9 490 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 IRX2Q9BZI1 471 aaPredicted RBP6.57□□□□□ -1.36
PROM1-201ENST00000447510 AZI2Q9H6S1 392 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 ABCB6Q9NP58 842 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 MORF4L1Q9UBU8 362 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 LRWD1Q9UFC0 647 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 PCDHB6Q9Y5E3 794 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 ZNF536O15090 1300 aa6.57□□□□□ -1.36
PROM1-201ENST00000447510 ATP8B1O43520 1251 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 TXNP10599 105 aaKnown RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 TECP42680 631 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 USP11P51784 963 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 LACTBP83111 547 aaPredicted RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 LRRC31Q6UY01 552 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 MIER3Q7Z3K6 550 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 SLFN12Q8IYM2 578 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 KRI1Q8N9T8 703 aaKnown RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 DAGLBQ8NCG7 672 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 PDCD2LQ9BRP1 358 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 PXMP2Q9NR77 195 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 CLIC4Q9Y696 253 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 MEIS2O14770 477 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 ATP2A1O14983 1001 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 ADCY3O60266 1144 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 ATP2C2O75185 946 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 ATP1A3P13637 1013 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 HNRNPH1P31943 449 aaKnown RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 ALDH5A1P51649 535 aaPredicted RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 NAA25Q14CX7 972 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 DPCR1Q3MIW9 517 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 C17orf99Q6UX52 265 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 DNERQ8NFT8 737 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 RNF217Q8TC41 542 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 CCDC47Q96A33 483 aaKnown RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 IWS1Q96ST2 819 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 PLIN2Q99541 437 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 CRACR2AQ9BSW2 395 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 BMP2KQ9NSY1 1161 aaPredicted RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 HOOK1Q9UJC3 728 aaKnown RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 NID2Q14112 1375 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 CCT6AP40227 531 aaKnown RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 FANCCQ00597 558 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 SPECC1Q5M775 1068 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 NAIF1Q69YI7 327 aaPredicted RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 ARMCX2Q7L311 632 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 FBXO16Q8IX29 292 aaPredicted RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 ZNF296Q8WUU4 475 aaPredicted RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 CLEC4DQ8WXI8 215 aa6.56□□□□□ -1.36
PROM1-201ENST00000447510 RIN2Q8WYP3 895 aaPredicted RBP6.56□□□□□ -1.36
PROM1-201ENST00000447510 CTAGE5O15320 804 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 RNF40O75150 1001 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 PPFIA4O75335 1185 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 TFRCP02786 760 aaKnown RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 BCRP11274 1271 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 CDR1P51861 262 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 ADKP55263 362 aaKnown RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 PRKCZQ05513 592 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 ACTN3Q08043 901 aaPredicted RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 MOGSQ13724 837 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 DHX40Q8IX18 779 aaKnown RBP6.55□□□□□ -1.36
PROM1-201ENST00000447510 RABGGTAQ92696 567 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 TRIM47Q96LD4 638 aa6.55□□□□□ -1.36
PROM1-201ENST00000447510 TINF2Q9BSI4 451 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms