RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 ADGRF4Q8IZF3 695 aa16.81■□□□□ 0.28
LIMK2-204ENST00000406516 ANKRD13CQ8N6S4 541 aa16.81■□□□□ 0.28
LIMK2-204ENST00000406516 GOLGA5Q8TBA6 731 aa16.81■□□□□ 0.28
LIMK2-204ENST00000406516 DDX25Q9UHL0 483 aaKnown RBP16.81■□□□□ 0.28
LIMK2-204ENST00000406516 HPCAL4Q9UM19 191 aa16.81■□□□□ 0.28
LIMK2-204ENST00000406516 GDF11O95390 407 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 ACTN2P35609 894 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 CACNA2D4Q7Z3S7 1137 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 CREG2Q8IUH2 290 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.8■□□□□ 0.28
LIMK2-204ENST00000406516 TSG101Q99816 390 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 FAM204AQ9H8W3 233 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 TBC1D7Q9P0N9 293 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.8■□□□□ 0.28
LIMK2-204ENST00000406516 ZNF112Q9UJU3 913 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 RNF40O75150 1001 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 SNHG28P0DPA3 235 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 IQCEQ6IPM2 695 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 LEKR1Q6ZMV7 388 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.8■□□□□ 0.28
LIMK2-204ENST00000406516 C2orf69Q8N8R5 385 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 BAP1Q92560 729 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 VIPAS39Q9H9C1 493 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 RIC8AQ9NPQ8 531 aa16.8■□□□□ 0.28
LIMK2-204ENST00000406516 PLIN4Q96Q06 1357 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 PNMA6FA0A0J9YX94 578 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 CXCR5P32302 372 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 ZNF543Q08ER8 600 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 COASYQ13057 564 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 NFRKBQ6P4R8 1299 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 MYOCDQ8IZQ8 938 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 RIN2Q8WYP3 895 aaPredicted RBP16.79■□□□□ 0.28
LIMK2-204ENST00000406516 HAS1Q92839 578 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 CLMNQ96JQ2 1002 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 NLRC4Q9NPP4 1024 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 TTLL1O95922 423 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 SYF2O95926 243 aaKnown RBP16.79■□□□□ 0.28
LIMK2-204ENST00000406516 MATR3P43243 847 aaKnown RBP eCLIP16.79■□□□□ 0.28
LIMK2-204ENST00000406516 MAGEA1P43355 309 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 MRPS25P82663 173 aaKnown RBP16.79■□□□□ 0.28
LIMK2-204ENST00000406516 GFPT1Q06210 699 aaPredicted RBP16.79■□□□□ 0.28
LIMK2-204ENST00000406516 EHHADHQ08426 723 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 CERKLQ49MI3 558 aaPredicted RBP16.79■□□□□ 0.28
LIMK2-204ENST00000406516 ARMC9Q7Z3E5 817 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 SMARCAL1Q9NZC9 954 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 SWAP70Q9UH65 585 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 ABCB11O95342 1321 aa16.79■□□□□ 0.28
LIMK2-204ENST00000406516 A0A0U1RQG5 324 aaPredicted RBP16.78■□□□□ 0.28
LIMK2-204ENST00000406516 IREB2P48200 963 aaKnown RBP16.78■□□□□ 0.28
LIMK2-204ENST00000406516 CCDC40Q4G0X9 1142 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 TDRD12Q587J7 1177 aaKnown RBP16.78■□□□□ 0.28
LIMK2-204ENST00000406516 CCNI2Q6ZMN8 369 aaPredicted RBP16.78■□□□□ 0.28
LIMK2-204ENST00000406516 KCTD1Q719H9 257 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 CUL5Q93034 780 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 DNAJC19Q96DA6 116 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 ALS2CR12Q96Q35 445 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 SELENOOQ9BVL4 669 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 FGFBP2Q9BYJ0 223 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 LRRC27Q9C0I9 530 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 IGKV6D-41A0A0C4DH26 115 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 USP17L10C9JJH3 530 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
LIMK2-204ENST00000406516 NCK2O43639 380 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 LCA5LO95447 670 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 CAP2P40123 477 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.283e-6■■■■■ 61.8
LIMK2-204ENST00000406516 PSMD2Q13200 908 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 PPP4R3AQ6IN85 833 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 PDXDC1Q6P996 788 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 HDAC7Q8WUI4 952 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 PANK4Q9NVE7 773 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 EHD2Q9NZN4 543 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 SALL4Q9UJQ4 1053 aa16.78■□□□□ 0.28
LIMK2-204ENST00000406516 TMEM88BA6NKF7 163 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 RAD21O60216 631 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 IRX5P78411 483 aaPredicted RBP16.77■□□□□ 0.28
LIMK2-204ENST00000406516 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.28
LIMK2-204ENST00000406516 KCNMA1Q12791 1236 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 VGLL4Q14135 290 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 CCDC70Q6NSX1 233 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 NELFCDQ8IXH7 590 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 OSBPL9Q96SU4 736 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 CRACR2AQ9BSW2 395 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 KANSL2Q9H9L4 492 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 COL4A3BPQ9Y5P4 624 aa16.77■□□□□ 0.28
LIMK2-204ENST00000406516 SLC1A4P43007 532 aa16.77■□□□□ 0.27
LIMK2-204ENST00000406516 SAPCD2Q86UD0 394 aa16.77■□□□□ 0.27
LIMK2-204ENST00000406516 LRRC1Q9BTT6 524 aa16.77■□□□□ 0.27
LIMK2-204ENST00000406516 CWC15Q9P013 229 aaKnown RBP16.77■□□□□ 0.27
LIMK2-204ENST00000406516 PCDHA12Q9UN75 941 aa16.77■□□□□ 0.27
LIMK2-204ENST00000406516 MYH10P35580 1976 aa16.77■□□□□ 0.27
LIMK2-204ENST00000406516 E9PMD0 336 aa16.76■□□□□ 0.27
LIMK2-204ENST00000406516 BUB1O43683 1085 aa16.76■□□□□ 0.27
LIMK2-204ENST00000406516 GH2P01242 217 aa16.76■□□□□ 0.27
LIMK2-204ENST00000406516 CLK2P49760 499 aaKnown RBP16.76■□□□□ 0.27
LIMK2-204ENST00000406516 APLP1P51693 650 aa16.76■□□□□ 0.27
LIMK2-204ENST00000406516 HUNKP57058 714 aa16.76■□□□□ 0.27
LIMK2-204ENST00000406516 FKBP1BP68106 108 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms