RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Krt72Q6IME9 520 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Sf3b3Q921M3 1217 aaKnown RBP13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Krt78E9Q0F0 1068 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Hsdl2Q2TPA8 490 aaKnown RBP13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Lrch2Q3UMG5 773 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Rnpc3Q3UZ01 514 aaKnown RBP13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Trim47Q8C0E3 641 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 ThtpaQ8JZL3 224 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Rpn1Q91YQ5 608 aaKnown RBP13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Tekt1Q9DAJ2 418 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Nek1P51954 1203 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Kcnk9Q3LS21 402 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Glg1Q61543 1175 aaKnown RBP13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 CcnyQ8BGU5 341 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Fam161bQ8CB59 589 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Top2bQ64511 1612 aa13.09□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 C130060K24RikG3UWA8 416 aa13.08□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Lipo1J3QME6 396 aa13.08□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Ctnnal1O88327 731 aa13.08□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Nlrx1Q3TL44 975 aa13.08□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Dpcr1Q3TNW5 500 aa13.08□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 MtbpQ8BJS8 894 aaKnown RBP13.08□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Tma7Q8K003 64 aaKnown RBP13.08□□□□□ -0.31
Pcdhac1-201ENSMUST00000007584 Nccrp1G3X9C2 266 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Cav1P49817 178 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Snx19Q6P4T1 997 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Uba6Q8C7R4 1053 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Wdr47Q8CGF6 920 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Trpm8Q8R4D5 1104 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Gps1Q99LD4 471 aaKnown RBP13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Rbm31yQ9D3U4 565 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 ThegQ9JMB1 375 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Kifc3O35231 824 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Copb2O55029 905 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ets2P15037 468 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Arl4cP61208 192 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 MlxipQ2VPU4 917 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Spata32Q8C5V0 334 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Dclre1bQ8C7W7 541 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Swi5Q8K3D3 89 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Bud13Q8R149 637 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Nek8Q91ZR4 698 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Rmi1Q9D4G9 616 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Capn9Q9D805 690 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Pole3Q9JKP7 145 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Aox4Q3TYQ9 1336 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Slc4a9E9PUP3 929 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 DtnbO70585 659 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Tsc22d1P62500 1077 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Runx2Q08775 607 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Znf667Q2TL60 609 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Tmtc1Q3UV71 942 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Itih1Q61702 907 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Krt87Q6IMF0 495 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ubap1Q8BH48 502 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Olfr866Q8VFI7 312 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Jph2Q9ET78 696 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Syngap1F6SEU4 1340 aa13.08□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ccdc141E9Q8Q6 1531 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Gm3173A6NAS3 172 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Gm3020E9Q3J7 150 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Gm2897K7N6T7 172 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Casp12O08736 419 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Lmntd2Q0VET5 664 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Mphosph8Q3TYA6 858 aaKnown RBP13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 TufmQ8BFR5 452 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Gm3411Q8C7R2 150 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Nsmce3Q9CPR8 279 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Iqcf1Q9D9K8 182 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Capn10Q9ESK3 666 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 AqrQ8CFQ3 1481 aaKnown RBP13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Snap23O09044 210 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Mybl1P51960 751 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Krt42Q6IFX2 452 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 R3hdm2Q80TM6 1044 aaKnown RBP13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 VmacQ8BP01 174 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Farp2Q91VS8 1065 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Tgs1Q923W1 853 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Zswim7Q9CWQ2 152 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 CinpQ9D0V8 212 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Nlrp5Q9R1M5 1163 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Apobec2Q9WV35 224 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Frmpd1A2AKB4 1549 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ftl1P29391 183 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Tnni3P48787 211 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 VcpQ01853 806 aaKnown RBP13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Tmprss11aQ3UQ41 389 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Mks1Q5SW45 561 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Gm5622Q810Q0 167 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Thap2Q9D305 217 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Cpb2Q9JHH6 422 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Fads3Q9JJE7 449 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Scgb2b7D3YYY1 112 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ugt1a6bK9J7B2 531 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 NficP70255 439 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Sycp3P70281 254 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ugt1a6Q64435 531 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ugt1a7cQ6ZQM8 531 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Pip4k2cQ91XU3 421 aa13.07□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Atp7aQ64430 1491 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms