RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 YNR061CP53747 219 aa-0.79□□□□□ -2.54
snR38snR38 DSL1P53847 754 aa-0.79□□□□□ -2.54
snR38snR38 MZM1Q03429 123 aaPredicted RBP-0.79□□□□□ -2.54
snR38snR38 CSI1Q04368 295 aa-0.79□□□□□ -2.54
snR38snR38 SRO7Q12038 1033 aa-0.79□□□□□ -2.54
snR38snR38 HIS4P00815 799 aaKnown RBP-0.8□□□□□ -2.54
snR38snR38 MF(ALPHA)1P01149 165 aa-0.8□□□□□ -2.54
snR38snR38 PRD1P25375 712 aa-0.8□□□□□ -2.54
snR38snR38 PEP3P27801 918 aa-0.8□□□□□ -2.54
snR38snR38 SSE2P32590 693 aaKnown RBP-0.8□□□□□ -2.54
snR38snR38 RRP1P35178 278 aaPredicted RBP-0.8□□□□□ -2.54
snR38snR38 DBP7P36120 742 aaKnown RBP-0.8□□□□□ -2.54
snR38snR38 MMS21P38632 267 aa-0.8□□□□□ -2.54
snR38snR38 WSC4P38739 605 aa-0.8□□□□□ -2.54
snR38snR38 LYS1P38998 373 aaRIP-Chip data-0.8□□□□□ -2.54not detected
snR38snR38 SFH5P47008 294 aa-0.8□□□□□ -2.54
snR38snR38 DSK2P48510 373 aa-0.8□□□□□ -2.54
snR38snR38 RSC1P53236 928 aa-0.8□□□□□ -2.54
snR38snR38 YNL095CP53932 642 aa-0.8□□□□□ -2.54
snR38snR38 REG1Q00816 1014 aa-0.8□□□□□ -2.54
snR38snR38 CEG1Q01159 459 aaPredicted RBP-0.8□□□□□ -2.54
snR38snR38 ENT5Q03769 411 aaKnown RBP-0.8□□□□□ -2.54
snR38snR38 YMR018WQ04364 514 aa-0.8□□□□□ -2.54
snR38snR38 YDR115WQ04598 105 aa-0.8□□□□□ -2.54
snR38snR38 MFG1Q07684 458 aa-0.8□□□□□ -2.54
snR38snR38 YLL032CQ07834 825 aaKnown RBP RIP-Chip data-0.8□□□□□ -2.54not detected
snR38snR38 AEP3Q12089 606 aa-0.8□□□□□ -2.54
snR38snR38 NYV1Q12255 253 aa-0.8□□□□□ -2.54
snR38snR38 AVL9Q12500 764 aa-0.8□□□□□ -2.54
snR38snR38 HTZ1Q12692 134 aaKnown RBP-0.8□□□□□ -2.54
snR38snR38 YLR302CO13544 120 aa-0.81□□□□□ -2.54
snR38snR38 YOL162WP0CF19 215 aa-0.81□□□□□ -2.54
snR38snR38 CPT1P17898 393 aa-0.81□□□□□ -2.54
snR38snR38 SCO1P23833 295 aa-0.81□□□□□ -2.54
snR38snR38 GIT1P25346 518 aa-0.81□□□□□ -2.54
snR38snR38 RRP14P36080 434 aaKnown RBP-0.81□□□□□ -2.54
snR38snR38 YBR138CP38277 524 aa-0.81□□□□□ -2.54
snR38snR38 SMC2P38989 1170 aaKnown RBP-0.81□□□□□ -2.54
snR38snR38 BDH1P39714 382 aa-0.81□□□□□ -2.54
snR38snR38 YER010CP40011 234 aa-0.81□□□□□ -2.54
snR38snR38 LCB3P47013 409 aa-0.81□□□□□ -2.54
snR38snR38 BET5Q03630 159 aa-0.81□□□□□ -2.54
snR38snR38 ARR1Q06596 294 aa-0.81□□□□□ -2.54
snR38snR38 YDL211CQ12121 372 aa-0.81□□□□□ -2.54
snR38snR38 RTP1Q12751 981 aa-0.81□□□□□ -2.54
snR38snR38 STE2D6VTK4 431 aa-0.82□□□□□ -2.54
snR38snR38 PIS1P06197 220 aaKnown RBP-0.82□□□□□ -2.54
snR38snR38 COR1P07256 457 aa-0.82□□□□□ -2.54
snR38snR38 PRP2P20095 876 aaPredicted RBP-0.82□□□□□ -2.54
snR38snR38 GYP6P32806 458 aa-0.82□□□□□ -2.54
snR38snR38 UBP11P36026 717 aa-0.82□□□□□ -2.54
snR38snR38 GRX7P38068 203 aa-0.82□□□□□ -2.54
snR38snR38 YBR071WP38243 211 aa-0.82□□□□□ -2.54
snR38snR38 PUG1P40100 303 aa-0.82□□□□□ -2.54
snR38snR38 YJR008WP47085 338 aa-0.82□□□□□ -2.54
snR38snR38 SYF2P53277 215 aaPredicted RBP-0.82□□□□□ -2.54
snR38snR38 VAC7P53950 1165 aa-0.82□□□□□ -2.54
snR38snR38 NUP49Q02199 472 aa-0.82□□□□□ -2.54
snR38snR38 GMC1Q04399 608 aa-0.82□□□□□ -2.54
snR38snR38 MSC3Q05812 728 aa-0.82□□□□□ -2.54
snR38snR38 MDM36Q06820 579 aa-0.82□□□□□ -2.54
snR38snR38 REX4Q08237 289 aa-0.82□□□□□ -2.54
snR38snR38 SKI7Q08491 747 aaPredicted RBP-0.82□□□□□ -2.54
snR38snR38 TCO89Q08921 799 aa-0.82□□□□□ -2.54
snR38snR38 YOL114CQ12322 202 aa-0.82□□□□□ -2.54
snR38snR38 RPS18AP0CX55 146 aaKnown RBP-0.83□□□□□ -2.54
snR38snR38 RPS18BP0CX56 146 aaPredicted RBP-0.83□□□□□ -2.54
snR38snR38 CLN1P20437 546 aa-0.83□□□□□ -2.54
snR38snR38 DAL81P21657 970 aa-0.83□□□□□ -2.54
snR38snR38 SHE3P38272 425 aaKnown RBP-0.83□□□□□ -2.54
snR38snR38 MBB1P39534 108 aa-0.83□□□□□ -2.54
snR38snR38 PSF2P40359 213 aa-0.83□□□□□ -2.54
snR38snR38 PEX8P53248 589 aa-0.83□□□□□ -2.54
snR38snR38 AQR1P53943 586 aa-0.83□□□□□ -2.54
snR38snR38 SMD1Q02260 146 aaPredicted RBP-0.83□□□□□ -2.54
snR38snR38 YMR244WQ04018 355 aa-0.83□□□□□ -2.54
snR38snR38 PRM6Q04705 352 aa-0.83□□□□□ -2.54
snR38snR38 FEX1Q08913 375 aa-0.83□□□□□ -2.54
snR38snR38 FEX2Q08991 375 aa-0.83□□□□□ -2.54
snR38snR38 BOL1Q3E793 110 aa-0.83□□□□□ -2.54
snR38snR38 YAL067W-AQ8TGK6 75 aa-0.83□□□□□ -2.54
snR38snR38 FLO11P08640 1367 aa-0.83□□□□□ -2.54
snR38snR38 YCL049CP25577 312 aa-0.84□□□□□ -2.54
snR38snR38 SIN4P32259 974 aa-0.84□□□□□ -2.54
snR38snR38 PHA2P32452 334 aa-0.84□□□□□ -2.54
snR38snR38 TFC4P33339 1025 aa-0.84□□□□□ -2.54
snR38snR38 ALY1P36117 915 aa-0.84□□□□□ -2.54
snR38snR38 MAL33P38157 468 aa-0.84□□□□□ -2.54
snR38snR38 GEP4P38812 185 aa-0.84□□□□□ -2.54
snR38snR38 LSM12P38828 187 aaKnown RBP-0.84□□□□□ -2.54
snR38snR38 PIL1P53252 339 aaKnown RBP-0.84□□□□□ -2.54
snR38snR38 YGR250CP53316 781 aaKnown RBP-0.84□□□□□ -2.54
snR38snR38 YDR387CQ04162 555 aa-0.84□□□□□ -2.54
snR38snR38 APC4Q04601 652 aa-0.84□□□□□ -2.54
snR38snR38 COQ9Q05779 260 aa-0.84□□□□□ -2.54
snR38snR38 RAX1Q08760 435 aa-0.84□□□□□ -2.54
snR38snR38 FMP40Q08968 688 aaPredicted RBP-0.84□□□□□ -2.54
snR38snR38 HMS1Q12398 434 aa-0.84□□□□□ -2.54
snR38snR38 PRP46Q12417 451 aaPredicted RBP-0.84□□□□□ -2.54
snR38snR38 DCP1Q12517 231 aaPredicted RBP-0.84□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms