RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W YGR054WP53235 642 aaKnown RBP1.6□□□□□ -2.15
CTF4YPR135W RHO5P53879 331 aaKnown RBP1.6□□□□□ -2.15
CTF4YPR135W PGA2P53903 129 aa1.6□□□□□ -2.15
CTF4YPR135W VPS38Q05919 439 aa1.6□□□□□ -2.15
CTF4YPR135W DIC1Q06143 298 aa1.6□□□□□ -2.15
CTF4YPR135W CUR1Q06469 252 aa1.6□□□□□ -2.15
CTF4YPR135W YDL218WQ07629 317 aa1.6□□□□□ -2.15
CTF4YPR135W RRT8Q08219 342 aa1.6□□□□□ -2.15
CTF4YPR135W SWT1Q12104 458 aa1.6□□□□□ -2.15
CTF4YPR135W RTC5Q12108 567 aaKnown RBP1.6□□□□□ -2.15
CTF4YPR135W UBX3Q12229 455 aa1.6□□□□□ -2.15
CTF4YPR135W Q0010Q9ZZX9 128 aa1.6□□□□□ -2.15
CTF4YPR135W YML002WP0CF17 737 aa1.6□□□□□ -2.15
CTF4YPR135W PCT1P13259 424 aa1.6□□□□□ -2.15
CTF4YPR135W ARF2P19146 181 aaKnown RBP1.6□□□□□ -2.15
CTF4YPR135W PHO84P25297 587 aaKnown RBP1.6□□□□□ -2.15
CTF4YPR135W BUD5P25300 642 aaPredicted RBP1.6□□□□□ -2.15
CTF4YPR135W ELO2P25358 347 aa1.6□□□□□ -2.15
CTF4YPR135W SIN4P32259 974 aa1.6□□□□□ -2.15
CTF4YPR135W SRB5P32585 307 aa1.6□□□□□ -2.15
CTF4YPR135W MRE11P32829 692 aa1.6□□□□□ -2.15
CTF4YPR135W CMC1P36064 111 aa1.6□□□□□ -2.15
CTF4YPR135W SLM4P38247 162 aa1.6□□□□□ -2.15
CTF4YPR135W MTG2P38860 518 aa1.6□□□□□ -2.15
CTF4YPR135W DLD2P46681 530 aaKnown RBP1.6□□□□□ -2.15
CTF4YPR135W IMD4P50094 524 aaKnown RBP1.6□□□□□ -2.15
CTF4YPR135W YGR111WP53265 400 aa1.6□□□□□ -2.15
CTF4YPR135W INA17Q02888 182 aa1.6□□□□□ -2.15
CTF4YPR135W KAP120Q02932 1032 aa1.6□□□□□ -2.15
CTF4YPR135W MTG1Q03151 367 aaPredicted RBP1.6□□□□□ -2.15
CTF4YPR135W ARG7Q04728 441 aa1.6□□□□□ -2.15
CTF4YPR135W MSC3Q05812 728 aa1.6□□□□□ -2.15
CTF4YPR135W IZH3Q07959 543 aa1.6□□□□□ -2.15
CTF4YPR135W APC5Q08683 685 aa1.6□□□□□ -2.15
CTF4YPR135W MRP13P12686 339 aa1.59□□□□□ -2.15
CTF4YPR135W RPL3P14126 387 aaKnown RBP1.59□□□□□ -2.15
CTF4YPR135W POL30P15873 258 aaKnown RBP1.59□□□□□ -2.15
CTF4YPR135W PPH21P23594 369 aa1.59□□□□□ -2.15
CTF4YPR135W PHO91P27514 894 aa1.59□□□□□ -2.15
CTF4YPR135W PAP1P29468 568 aaKnown RBP1.59□□□□□ -2.15
CTF4YPR135W MRPL9P31334 269 aa1.59□□□□□ -2.15
CTF4YPR135W AFG1P32317 509 aa1.59□□□□□ -2.15
CTF4YPR135W LTV1P34078 463 aa1.59□□□□□ -2.15
CTF4YPR135W TAE1P38340 232 aa1.59□□□□□ -2.15
CTF4YPR135W DSE1P40077 573 aa1.59□□□□□ -2.15
CTF4YPR135W ALG5P40350 334 aa1.59□□□□□ -2.15
CTF4YPR135W MKT1P40850 830 aaKnown RBP1.59□□□□□ -2.15
CTF4YPR135W APT1P49435 187 aaKnown RBP1.59□□□□□ -2.15
CTF4YPR135W YGR066CP53242 292 aa1.59□□□□□ -2.15
CTF4YPR135W CPR8P53728 308 aa1.59□□□□□ -2.15
CTF4YPR135W YDR179W-AQ03983 463 aa1.59□□□□□ -2.15
CTF4YPR135W ECM18Q04623 453 aa1.59□□□□□ -2.15
CTF4YPR135W NUS1Q12063 375 aa1.59□□□□□ -2.15
CTF4YPR135W YLR049CQ12110 428 aa1.59□□□□□ -2.15
CTF4YPR135W HER1Q12276 1246 aa1.59□□□□□ -2.15
CTF4YPR135W SPT15P13393 240 aaKnown RBP1.59□□□□□ -2.15
CTF4YPR135W GEX1P25596 615 aa1.59□□□□□ -2.15
CTF4YPR135W YIH1P25637 258 aa1.59□□□□□ -2.15
CTF4YPR135W IDH2P28241 369 aaKnown RBP1.59□□□□□ -2.15
CTF4YPR135W PDB1P32473 366 aaKnown RBP1.59□□□□□ -2.15
CTF4YPR135W YME2P32843 850 aa1.59□□□□□ -2.15
CTF4YPR135W ELF1P36053 145 aa1.59□□□□□ -2.15
CTF4YPR135W CTM1P38818 585 aa1.59□□□□□ -2.15
CTF4YPR135W PCI8P40512 444 aa1.59□□□□□ -2.15
CTF4YPR135W CDC1P40986 491 aa1.59□□□□□ -2.15
CTF4YPR135W HXT14P42833 540 aa1.59□□□□□ -2.15
CTF4YPR135W ELP2P42935 788 aa1.59□□□□□ -2.15
CTF4YPR135W EPL1P43572 832 aa1.59□□□□□ -2.15
CTF4YPR135W YGR079WP53249 370 aa1.59□□□□□ -2.15
CTF4YPR135W TWF1P53250 332 aa1.59□□□□□ -2.15
CTF4YPR135W YNL143CP53908 130 aa1.59□□□□□ -2.15
CTF4YPR135W VAC7P53950 1165 aa1.59□□□□□ -2.15
CTF4YPR135W YNL040WP53960 456 aaPredicted RBP1.59□□□□□ -2.15
CTF4YPR135W YDR239CQ03780 787 aa1.59□□□□□ -2.15
CTF4YPR135W MGR3Q04472 501 aa1.59□□□□□ -2.15
CTF4YPR135W KAP95Q06142 861 aaKnown RBP1.59□□□□□ -2.15
CTF4YPR135W ARV1Q06541 321 aa1.59□□□□□ -2.15
CTF4YPR135W DCI1Q08558 271 aa1.59□□□□□ -2.15
CTF4YPR135W APL5Q08951 932 aaKnown RBP1.59□□□□□ -2.15
CTF4YPR135W ATG9Q12142 997 aa1.59□□□□□ -2.15
CTF4YPR135W ILV2P07342 687 aaKnown RBP1.59□□□□□ -2.16
CTF4YPR135W HNM1P19807 563 aa1.59□□□□□ -2.16
CTF4YPR135W AMD2P22580 549 aa1.59□□□□□ -2.16
CTF4YPR135W YIM1P28625 365 aa1.59□□□□□ -2.16
CTF4YPR135W FAA1P30624 700 aaKnown RBP1.59□□□□□ -2.16
CTF4YPR135W SRB2P34162 210 aa1.59□□□□□ -2.16
CTF4YPR135W KES1P35844 434 aaKnown RBP1.59□□□□□ -2.16
CTF4YPR135W RPF2P36160 344 aaKnown RBP1.59□□□□□ -2.16
CTF4YPR135W YBR139WP38109 508 aa1.59□□□□□ -2.16
CTF4YPR135W SEC31P38968 1273 aaKnown RBP1.59□□□□□ -2.16
CTF4YPR135W YAL037WP39728 267 aa1.59□□□□□ -2.16
CTF4YPR135W PKP1P40530 394 aa1.59□□□□□ -2.16
CTF4YPR135W ALK1P43633 760 aaKnown RBP1.59□□□□□ -2.16
CTF4YPR135W YIP4P53093 235 aa1.59□□□□□ -2.16
CTF4YPR135W STR3P53101 465 aaKnown RBP1.59□□□□□ -2.16
CTF4YPR135W COG2P53271 262 aa1.59□□□□□ -2.16
CTF4YPR135W SCW4P53334 386 aaKnown RBP1.59□□□□□ -2.16
CTF4YPR135W ATP23P53722 227 aa1.59□□□□□ -2.16
CTF4YPR135W EGD1Q02642 157 aaKnown RBP1.59□□□□□ -2.16
CTF4YPR135W RRN5Q02983 363 aa1.59□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms