RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W HSV2P50079 448 aaPredicted RBP9.52□□□□□ -0.89
MSF1YPR047W GMC2Q06201 188 aa9.52□□□□□ -0.89
MSF1YPR047W YOR365CQ08844 703 aa9.52□□□□□ -0.89
MSF1YPR047W YVC1Q12324 675 aa9.52□□□□□ -0.89
MSF1YPR047W YKL068W-AQ3E826 78 aa9.52□□□□□ -0.89
MSF1YPR047W RPL20AP0CX23 172 aaKnown RBP9.51□□□□□ -0.89
MSF1YPR047W RPL20BP0CX24 172 aaPredicted RBP9.51□□□□□ -0.89
MSF1YPR047W CTS1P29029 562 aa9.51□□□□□ -0.89
MSF1YPR047W SEA4P38164 1038 aa9.51□□□□□ -0.89
MSF1YPR047W CIN1P40987 1014 aa9.51□□□□□ -0.89
MSF1YPR047W PMT4P46971 762 aa9.51□□□□□ -0.89
MSF1YPR047W ARI1P53111 347 aaKnown RBP9.51□□□□□ -0.89
MSF1YPR047W CDH1P53197 566 aa9.51□□□□□ -0.89
MSF1YPR047W BSC5P53755 489 aa9.51□□□□□ -0.89
MSF1YPR047W CUS2P53830 285 aaPredicted RBP9.51□□□□□ -0.89
MSF1YPR047W REX2P54964 269 aaKnown RBP9.51□□□□□ -0.89
MSF1YPR047W RNT1Q02555 471 aa9.51□□□□□ -0.89
MSF1YPR047W WTM2Q12206 467 aa9.51□□□□□ -0.89
MSF1YPR047W YRM1Q12340 786 aa9.51□□□□□ -0.89
MSF1YPR047W NOT5Q12514 560 aaPredicted RBP9.51□□□□□ -0.89
MSF1YPR047W RAS2P01120 322 aaKnown RBP9.5□□□□□ -0.89
MSF1YPR047W YMR085WP0CF18 432 aa9.5□□□□□ -0.89
MSF1YPR047W RPB5P20434 215 aa9.5□□□□□ -0.89
MSF1YPR047W SEC17P32602 292 aa9.5□□□□□ -0.89
MSF1YPR047W PTC1P35182 281 aa9.5□□□□□ -0.89
MSF1YPR047W DHR2P36009 735 aaPredicted RBP9.5□□□□□ -0.89
MSF1YPR047W GLG1P36143 616 aa9.5□□□□□ -0.89
MSF1YPR047W YBL029WP38201 376 aa9.5□□□□□ -0.89
MSF1YPR047W YBR062CP38239 180 aa9.5□□□□□ -0.89
MSF1YPR047W AYR1P40471 297 aa9.5□□□□□ -0.89
MSF1YPR047W BNA3P47039 444 aaKnown RBP9.5□□□□□ -0.89
MSF1YPR047W PBP1P53297 722 aaKnown RBP9.5□□□□□ -0.89
MSF1YPR047W CGI121Q03705 181 aaKnown RBP9.5□□□□□ -0.89
MSF1YPR047W SMA2Q04658 369 aa9.5□□□□□ -0.89
MSF1YPR047W SFH1Q06168 426 aa9.5□□□□□ -0.89
MSF1YPR047W YEH2Q07950 538 aa9.5□□□□□ -0.89
MSF1YPR047W FDH1Q08911 376 aa9.5□□□□□ -0.89
MSF1YPR047W SAS5Q99314 248 aa9.5□□□□□ -0.89
MSF1YPR047W CBP2P03874 630 aaPredicted RBP9.49□□□□□ -0.89
MSF1YPR047W ECO1P43605 281 aa9.49□□□□□ -0.89
MSF1YPR047W EMC2P47133 292 aaKnown RBP9.49□□□□□ -0.89
MSF1YPR047W MTR3P48240 250 aaPredicted RBP9.49□□□□□ -0.89
MSF1YPR047W RPN14P53196 417 aa9.49□□□□□ -0.89
MSF1YPR047W PDR16P53860 351 aaKnown RBP9.49□□□□□ -0.89
MSF1YPR047W GLO2Q05584 274 aa9.49□□□□□ -0.89
MSF1YPR047W JLP1Q12358 412 aa9.49□□□□□ -0.89
MSF1YPR047W SSA3P09435 649 aaKnown RBP9.48□□□□□ -0.89
MSF1YPR047W FRE2P36033 711 aa9.48□□□□□ -0.89
MSF1YPR047W GRE3P38715 327 aaKnown RBP RIP-Chip data9.48□□□□□ -0.89not detected
MSF1YPR047W PKP1P40530 394 aa9.48□□□□□ -0.89
MSF1YPR047W YJL043WP47053 257 aa9.48□□□□□ -0.89
MSF1YPR047W BPL1P48445 690 aaPredicted RBP9.48□□□□□ -0.89
MSF1YPR047W TAF6P53040 516 aa9.48□□□□□ -0.89
MSF1YPR047W HOS2P53096 452 aaPredicted RBP9.48□□□□□ -0.89
MSF1YPR047W MRM2P53123 320 aa9.48□□□□□ -0.89
MSF1YPR047W TPC1P53257 314 aa9.48□□□□□ -0.89
MSF1YPR047W YLR460CP54007 376 aa9.48□□□□□ -0.89
MSF1YPR047W YSA1Q01976 231 aa9.48□□□□□ -0.89
MSF1YPR047W YOS9Q99220 542 aa9.48□□□□□ -0.89
MSF1YPR047W AAC3P18238 307 aa9.48□□□□□ -0.89
MSF1YPR047W RVS161P25343 265 aaKnown RBP9.48□□□□□ -0.89
MSF1YPR047W MKK1P32490 508 aa9.48□□□□□ -0.89
MSF1YPR047W LHS1P36016 881 aa9.48□□□□□ -0.89
MSF1YPR047W STP2P38704 541 aa9.48□□□□□ -0.89
MSF1YPR047W ARN1P38731 627 aa9.48□□□□□ -0.89
MSF1YPR047W PZF1P39933 429 aa9.48□□□□□ -0.89
MSF1YPR047W YIL067CP40514 678 aa9.48□□□□□ -0.89
MSF1YPR047W UBP6P43593 499 aaKnown RBP9.48□□□□□ -0.89
MSF1YPR047W ATP25Q03153 612 aa9.48□□□□□ -0.89
MSF1YPR047W YLL007CQ07799 665 aa9.48□□□□□ -0.89
MSF1YPR047W CAR1P00812 333 aaKnown RBP9.47□□□□□ -0.89
MSF1YPR047W MRP13P12686 339 aa9.47□□□□□ -0.89
MSF1YPR047W ERG8P24521 451 aa9.47□□□□□ -0.89
MSF1YPR047W RPC19P28000 142 aaKnown RBP9.47□□□□□ -0.89
MSF1YPR047W EMP70P32802 667 aa9.47□□□□□ -0.89
MSF1YPR047W SCO2P38072 301 aa9.47□□□□□ -0.89
MSF1YPR047W LYS12P40495 371 aaKnown RBP9.47□□□□□ -0.89
MSF1YPR047W SHR5P41912 237 aa9.47□□□□□ -0.89
MSF1YPR047W RPS12P48589 143 aaKnown RBP9.47□□□□□ -0.89
MSF1YPR047W MPA43P53583 542 aaPredicted RBP9.47□□□□□ -0.89
MSF1YPR047W RPM2Q02773 1202 aa9.47□□□□□ -0.89
MSF1YPR047W EFR3Q03653 782 aaKnown RBP9.47□□□□□ -0.89
MSF1YPR047W YMR310CQ04867 317 aaPredicted RBP9.47□□□□□ -0.89
MSF1YPR047W YLR413WQ06689 675 aa9.47□□□□□ -0.89
MSF1YPR047W SGT1Q08446 395 aa9.47□□□□□ -0.89
MSF1YPR047W BAG7Q12128 409 aa9.47□□□□□ -0.89
MSF1YPR047W COX17Q12287 69 aa9.47□□□□□ -0.89
MSF1YPR047W SKS1Q12505 502 aa9.47□□□□□ -0.89
MSF1YPR047W UNG1P12887 359 aa9.46□□□□□ -0.9
MSF1YPR047W MCK1P21965 375 aaKnown RBP9.46□□□□□ -0.9
MSF1YPR047W APE4P38821 490 aa9.46□□□□□ -0.9
MSF1YPR047W RNH70P53331 553 aa9.46□□□□□ -0.9
MSF1YPR047W YLR446WQ06204 433 aa9.46□□□□□ -0.9
MSF1YPR047W MMP1Q12372 583 aa9.46□□□□□ -0.9
MSF1YPR047W PSF1Q12488 208 aa9.46□□□□□ -0.9
MSF1YPR047W MDM12Q92328 271 aa9.46□□□□□ -0.9
MSF1YPR047W ATG15P25641 520 aa9.45□□□□□ -0.9
MSF1YPR047W RPT5P33297 434 aaKnown RBP9.45□□□□□ -0.9
MSF1YPR047W SNU114P36048 1008 aaKnown RBP9.45□□□□□ -0.9
MSF1YPR047W HSM3P38348 480 aa9.45□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms