RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W RPS4AP0CX35 261 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W RPS4BP0CX36 261 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W TY1A-AP0CX57 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-PR1P0CX58 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-ORP0CX59 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-PR2P0CX60 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-DR5P0CX65 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-ER2P0CX66 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-GR3P0CX67 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-LR1P0CX68 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-MR2P0CX69 440 aa3.84□□□□□ -1.79
SRO7YPR032W MRPL44P19956 98 aa3.84□□□□□ -1.79
SRO7YPR032W PRP28P23394 588 aa3.84□□□□□ -1.79
SRO7YPR032W BUB2P26448 306 aaPredicted RBP3.84□□□□□ -1.79
SRO7YPR032W MSN2P33748 704 aa3.84□□□□□ -1.79
SRO7YPR032W YKL162CP36052 402 aa3.84□□□□□ -1.79
SRO7YPR032W YMR262WP38430 313 aa3.84□□□□□ -1.79
SRO7YPR032W PGD1P40356 397 aa3.84□□□□□ -1.79
SRO7YPR032W IRC24P40580 263 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-JR2P47099 440 aa3.84□□□□□ -1.79
SRO7YPR032W YGR012WP53206 393 aa3.84□□□□□ -1.79
SRO7YPR032W PRP38Q00723 242 aaPredicted RBP3.84□□□□□ -1.79
SRO7YPR032W JIP4Q03361 876 aa3.84□□□□□ -1.79
SRO7YPR032W YMR160WQ03823 816 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-DR1Q03856 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-ML1Q04706 440 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W PAL1Q05518 499 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W DUS4Q06063 367 aa3.84□□□□□ -1.79
SRO7YPR032W YFT2Q06676 274 aa3.84□□□□□ -1.79
SRO7YPR032W GUP2Q08929 609 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-BRQ12217 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-NL2Q12470 440 aa3.84□□□□□ -1.79
SRO7YPR032W TY1A-GR2Q12485 440 aa3.84□□□□□ -1.79
SRO7YPR032W FUM1P08417 488 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W SSA3P09435 649 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W FRS1P15624 595 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W FUR1P18562 216 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W GID7P25569 745 aa3.84□□□□□ -1.79
SRO7YPR032W ACB1P31787 87 aa3.84□□□□□ -1.79
SRO7YPR032W SPO23P33757 523 aa3.84□□□□□ -1.79
SRO7YPR032W PEX32P38292 413 aa3.84□□□□□ -1.79
SRO7YPR032W DED81P38707 554 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W MXR1P40029 184 aa3.84□□□□□ -1.79
SRO7YPR032W ICP55P40051 511 aa3.84□□□□□ -1.79
SRO7YPR032W SLZ1P40167 298 aa3.84□□□□□ -1.79
SRO7YPR032W COA1P40452 197 aa3.84□□□□□ -1.79
SRO7YPR032W GDS1P41913 522 aa3.84□□□□□ -1.79
SRO7YPR032W AIM22P47051 409 aa3.84□□□□□ -1.79
SRO7YPR032W YAE1P47118 141 aaPredicted RBP3.84□□□□□ -1.79
SRO7YPR032W RPS12P48589 143 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W SEH1P53011 349 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W IGO1P53897 168 aa3.84□□□□□ -1.79
SRO7YPR032W CAC2Q04199 468 aa3.84□□□□□ -1.79
SRO7YPR032W RCO1Q04779 684 aa3.84□□□□□ -1.79
SRO7YPR032W MRPL35Q06678 367 aa3.84□□□□□ -1.79
SRO7YPR032W ZEO1Q08245 113 aa3.84□□□□□ -1.79
SRO7YPR032W RRG7Q08774 242 aaPredicted RBP3.84□□□□□ -1.79
SRO7YPR032W MMP1Q12372 583 aa3.84□□□□□ -1.79
SRO7YPR032W LPX1Q12405 387 aaKnown RBP3.84□□□□□ -1.79
SRO7YPR032W Q0142Q9ZZW4 58 aa3.84□□□□□ -1.79
SRO7YPR032W AAC1P04710 309 aa3.84□□□□□ -1.8
SRO7YPR032W CHS1P08004 1131 aa3.84□□□□□ -1.8
SRO7YPR032W SRD1P09007 221 aa3.84□□□□□ -1.8
SRO7YPR032W GAP1P19145 602 aaPredicted RBP3.84□□□□□ -1.8
SRO7YPR032W UTR1P21373 530 aa3.84□□□□□ -1.8
SRO7YPR032W GRR1P24814 1151 aa3.84□□□□□ -1.8
SRO7YPR032W GRX1P25373 110 aaKnown RBP3.84□□□□□ -1.8
SRO7YPR032W IDH1P28834 360 aaKnown RBP RIP-Chip data3.84□□□□□ -1.8not detected
SRO7YPR032W MRPL9P31334 269 aa3.84□□□□□ -1.8
SRO7YPR032W GLC3P32775 704 aa3.84□□□□□ -1.8
SRO7YPR032W LIP5P32875 414 aa3.84□□□□□ -1.8
SRO7YPR032W APT2P36973 181 aa3.84□□□□□ -1.8
SRO7YPR032W CHK1P38147 527 aa3.84□□□□□ -1.8
SRO7YPR032W YBR013CP38215 129 aa3.84□□□□□ -1.8
SRO7YPR032W HSL7P38274 827 aa3.84□□□□□ -1.8
SRO7YPR032W PTC7P38797 343 aa3.84□□□□□ -1.8
SRO7YPR032W DHH1P39517 506 aaKnown RBP3.84□□□□□ -1.8
SRO7YPR032W SLS1P42900 643 aa3.84□□□□□ -1.8
SRO7YPR032W IDS2P46958 469 aa3.84□□□□□ -1.8
SRO7YPR032W PMT4P46971 762 aa3.84□□□□□ -1.8
SRO7YPR032W ABM1P47146 123 aa3.84□□□□□ -1.8
SRO7YPR032W JAC1P53193 184 aa3.84□□□□□ -1.8
SRO7YPR032W VPS62P53285 467 aa3.84□□□□□ -1.8
SRO7YPR032W CDC55Q00362 526 aa3.84□□□□□ -1.8
SRO7YPR032W RPN4Q03465 531 aa3.84□□□□□ -1.8
SRO7YPR032W PPN1Q04119 674 aa3.84□□□□□ -1.8
SRO7YPR032W SYT1Q06836 1226 aa3.84□□□□□ -1.8
SRO7YPR032W RRP40Q08285 240 aaKnown RBP3.84□□□□□ -1.8
SRO7YPR032W YLR126CQ12288 251 aa3.84□□□□□ -1.8
SRO7YPR032W SUS1Q6WNK7 96 aa3.84□□□□□ -1.8
SRO7YPR032W MTR10Q99189 972 aa3.84□□□□□ -1.8
SRO7YPR032W THP2O13539 261 aaKnown RBP3.83□□□□□ -1.8
SRO7YPR032W SCEIP03882 235 aa3.83□□□□□ -1.8
SRO7YPR032W SNF6P18888 332 aa3.83□□□□□ -1.8
SRO7YPR032W IFM1P25038 676 aa3.83□□□□□ -1.8
SRO7YPR032W HCM1P25364 564 aa3.83□□□□□ -1.8
SRO7YPR032W PRP45P28004 379 aaPredicted RBP3.83□□□□□ -1.8
SRO7YPR032W SFC1P33303 322 aa3.83□□□□□ -1.8
SRO7YPR032W SRY1P36007 326 aa3.83□□□□□ -1.8
SRO7YPR032W AIM18P38884 321 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms