RNA–Protein interactions for RNA: YNL153C

GIM3, Transcript of Subunit of the heterohexameric cochaperone prefoldin complex, yeast

Gene GIM3, Length 390 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIM3	YNL153C	BCH1	Q05029	724 aa		2.7	□□□□□ -1.98
GIM3	YNL153C	IRC25	Q07951	179 aa		2.7	□□□□□ -1.98
GIM3	YNL153C	SFI1	Q12369	946 aa		2.7	□□□□□ -1.98
GIM3	YNL153C	AFI1	Q99222	893 aa		2.7	□□□□□ -1.98
GIM3	YNL153C	SCEI	P03882	235 aa		2.69	□□□□□ -1.98
GIM3	YNL153C	RRN10	P38204	145 aa		2.69	□□□□□ -1.98
GIM3	YNL153C	PCF11	P39081	626 aa	Predicted RBP	2.69	□□□□□ -1.98
GIM3	YNL153C	YAL037W	P39728	267 aa		2.69	□□□□□ -1.98
GIM3	YNL153C	LSM5	P40089	93 aa	Known RBP	2.69	□□□□□ -1.98
GIM3	YNL153C	MDE1	P47095	244 aa		2.69	□□□□□ -1.98
GIM3	YNL153C	YJR085C	P47131	105 aa	Known RBP	2.69	□□□□□ -1.98
GIM3	YNL153C	OCA2	P53949	197 aa		2.69	□□□□□ -1.98
GIM3	YNL153C	ADA2	Q02336	434 aa		2.69	□□□□□ -1.98
GIM3	YNL153C	KAP120	Q02932	1032 aa		2.69	□□□□□ -1.98
GIM3	YNL153C	NAT1	P12945	854 aa	Known RBP	2.68	□□□□□ -1.98
GIM3	YNL153C	BRF1	P29056	596 aa		2.68	□□□□□ -1.98
GIM3	YNL153C	NPL6	P32832	435 aa		2.68	□□□□□ -1.98
GIM3	YNL153C	PRS1	P32895	427 aa	Known RBP	2.68	□□□□□ -1.98
GIM3	YNL153C	JNM1	P36224	373 aa		2.68	□□□□□ -1.98
GIM3	YNL153C	YBR056W	P38081	501 aa		2.68	□□□□□ -1.98
GIM3	YNL153C	AIM10	P39965	576 aa	Known RBP	2.68	□□□□□ -1.98
GIM3	YNL153C	SFH5	P47008	294 aa		2.68	□□□□□ -1.98
GIM3	YNL153C	TAF12	Q03761	539 aa		2.68	□□□□□ -1.98
GIM3	YNL153C	YMR130W	Q04223	302 aa		2.68	□□□□□ -1.98
GIM3	YNL153C	DON1	Q05610	365 aa		2.68	□□□□□ -1.98
GIM3	YNL153C	SRL2	Q12020	392 aa		2.68	□□□□□ -1.98
GIM3	YNL153C	SCM3	Q12334	223 aa		2.68	□□□□□ -1.98
GIM3	YNL153C	IMA3	P0CW40	589 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	IMA4	P0CW41	589 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	HOM3	P10869	527 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	ERV1	P27882	189 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	NUP2	P32499	720 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	TFB1	P32776	642 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	CHK1	P38147	527 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	SBE22	P38814	852 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	YIL029C	P40538	142 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	CCE1	Q03702	353 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	DCS1	Q06151	350 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	IMA2	Q08295	589 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	IZH2	Q12442	317 aa		2.67	□□□□□ -1.98
GIM3	YNL153C	YCL068C	P25593	260 aa		2.66	□□□□□ -1.98
GIM3	YNL153C	NFU1	P32860	256 aa		2.66	□□□□□ -1.98
GIM3	YNL153C	MIG3	P39943	394 aa		2.66	□□□□□ -1.98
GIM3	YNL153C	UTP18	P40362	594 aa	Predicted RBP	2.66	□□□□□ -1.98
GIM3	YNL153C	SRB7	P47822	140 aa		2.66	□□□□□ -1.98
GIM3	YNL153C	MTQ1	P53944	314 aa		2.66	□□□□□ -1.98
GIM3	YNL153C	ACL4	Q03771	387 aa		2.66	□□□□□ -1.98
GIM3	YNL153C	TSA2	Q04120	196 aa		2.66	□□□□□ -1.98
GIM3	YNL153C	SNT309	Q06091	175 aa	Predicted RBP	2.66	□□□□□ -1.98
GIM3	YNL153C	CUE5	Q08412	411 aa	Known RBP	2.66	□□□□□ -1.98
GIM3	YNL153C	ADK2	P26364	225 aa		2.65	□□□□□ -1.99
GIM3	YNL153C	NOC2	P39744	710 aa	Known RBP	2.65	□□□□□ -1.99
GIM3	YNL153C	GAB1	P41733	394 aa		2.65	□□□□□ -1.99
GIM3	YNL153C	MMR1	Q06324	491 aa		2.65	□□□□□ -1.99
GIM3	YNL153C	VPS54	Q12071	889 aa		2.65	□□□□□ -1.99
GIM3	YNL153C	COX3	P00420	269 aa		2.64	□□□□□ -1.99
GIM3	YNL153C	URA7	P28274	579 aa	Known RBP	2.64	□□□□□ -1.99
GIM3	YNL153C	YKL097C	P34245	136 aa		2.64	□□□□□ -1.99
GIM3	YNL153C	HEL1	P36113	551 aa		2.64	□□□□□ -1.99
GIM3	YNL153C	MRM2	P53123	320 aa		2.64	□□□□□ -1.99
GIM3	YNL153C	BUG1	Q12191	341 aa		2.64	□□□□□ -1.99
GIM3	YNL153C	TPT1	Q12272	230 aa	Known RBP	2.64	□□□□□ -1.99
GIM3	YNL153C	ATG34	Q12292	412 aa		2.64	□□□□□ -1.99
GIM3	YNL153C	ADE4	P04046	510 aa	Known RBP	2.63	□□□□□ -1.99
GIM3	YNL153C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
GIM3	YNL153C	SLM4	P38247	162 aa		2.63	□□□□□ -1.99
GIM3	YNL153C	COX14	P39103	70 aa		2.63	□□□□□ -1.99
GIM3	YNL153C	BIR1	P47134	954 aa		2.63	□□□□□ -1.99
GIM3	YNL153C	ERB1	Q04660	807 aa	Known RBP	2.63	□□□□□ -1.99
GIM3	YNL153C	LIP2	Q06005	328 aa		2.63	□□□□□ -1.99
GIM3	YNL153C	PLP2	Q12017	286 aa		2.63	□□□□□ -1.99
GIM3	YNL153C	SMF3	Q12078	473 aa	Predicted RBP	2.63	□□□□□ -1.99
GIM3	YNL153C	MSI1	P13712	422 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	ARO3	P14843	370 aa	Known RBP	2.62	□□□□□ -1.99
GIM3	YNL153C	PHA2	P32452	334 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	MRP21	P38175	177 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	RTC2	P38279	296 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	SIM1	P40472	476 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	YFR057W	P43625	151 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	LCB3	P47013	409 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	STD1	Q02794	444 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	YDR131C	Q03899	556 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	URH1	Q04179	340 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	RIF2	Q06208	395 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	RRP9	Q06506	573 aa	Known RBP	2.62	□□□□□ -1.99
GIM3	YNL153C	NDE2	Q07500	545 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	RAX1	Q08760	435 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	YDL012C	Q12489	107 aa		2.62	□□□□□ -1.99
GIM3	YNL153C	CAP2	P13517	287 aa		2.61	□□□□□ -1.99
GIM3	YNL153C	EXG1	P23776	448 aa	Known RBP	2.61	□□□□□ -1.99
GIM3	YNL153C	RRP1	P35178	278 aa	Predicted RBP	2.61	□□□□□ -1.99
GIM3	YNL153C	ATP3	P38077	311 aa	Known RBP	2.61	□□□□□ -1.99
GIM3	YNL153C	SER3	P40054	469 aa		2.61	□□□□□ -1.99
GIM3	YNL153C	ZIM17	P42844	174 aa		2.61	□□□□□ -1.99
GIM3	YNL153C	CAK1	P43568	368 aa	Predicted RBP	2.61	□□□□□ -1.99
GIM3	YNL153C	HOT1	Q03213	719 aa		2.61	□□□□□ -1.99
GIM3	YNL153C	JID1	Q12350	301 aa		2.61	□□□□□ -1.99
GIM3	YNL153C	NCA2	Q12374	616 aa		2.61	□□□□□ -1.99
GIM3	YNL153C	MTR10	Q99189	972 aa		2.61	□□□□□ -1.99
GIM3	YNL153C	CLB1	P24868	471 aa		2.6	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 83.9 ms