RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C EFM6P53970 246 aa4.44□□□□□ -1.7
EAR1YMR171C SLG1P54867 378 aa4.44□□□□□ -1.7
EAR1YMR171C CIK1Q01649 594 aa4.44□□□□□ -1.7
EAR1YMR171C RMI1Q02685 241 aa4.44□□□□□ -1.7
EAR1YMR171C MMT1Q03218 510 aa4.44□□□□□ -1.7
EAR1YMR171C RCF1Q03713 159 aa4.44□□□□□ -1.7
EAR1YMR171C GIS1Q03833 894 aa4.44□□□□□ -1.7
EAR1YMR171C YDR109CQ04585 715 aa4.44□□□□□ -1.7
EAR1YMR171C SLD7Q08457 257 aa4.44□□□□□ -1.7
EAR1YMR171C RPN8Q08723 338 aaKnown RBP4.44□□□□□ -1.7
EAR1YMR171C RSA1Q08932 381 aa4.44□□□□□ -1.7
EAR1YMR171C DDC1Q08949 612 aa4.44□□□□□ -1.7
EAR1YMR171C NBP2Q12163 236 aa4.44□□□□□ -1.7
EAR1YMR171C TY3A-GQ12173 290 aa4.44□□□□□ -1.7
EAR1YMR171C TY3A-IQ99219 290 aa4.44□□□□□ -1.7
EAR1YMR171C RPN13O13563 156 aa4.43□□□□□ -1.7
EAR1YMR171C HIS1P00498 297 aaKnown RBP4.43□□□□□ -1.7
EAR1YMR171C RAP1P11938 827 aa4.43□□□□□ -1.7
EAR1YMR171C GCN3P14741 305 aa4.43□□□□□ -1.7
EAR1YMR171C ART10P18634 518 aaKnown RBP4.43□□□□□ -1.7
EAR1YMR171C DBR1P24309 405 aaKnown RBP4.43□□□□□ -1.7
EAR1YMR171C SSH4P32343 579 aa4.43□□□□□ -1.7
EAR1YMR171C CYS4P32582 507 aaKnown RBP4.43□□□□□ -1.7
EAR1YMR171C ATO2P32907 282 aa4.43□□□□□ -1.7
EAR1YMR171C SPC34P36131 295 aa4.43□□□□□ -1.7
EAR1YMR171C SKG1P36169 355 aa4.43□□□□□ -1.7
EAR1YMR171C MRPL36P36531 177 aa4.43□□□□□ -1.7
EAR1YMR171C YBR285WP38354 144 aa4.43□□□□□ -1.7
EAR1YMR171C HAT2P39984 401 aa4.43□□□□□ -1.7
EAR1YMR171C MET18P40469 1032 aa4.43□□□□□ -1.7
EAR1YMR171C STB2P46679 850 aa4.43□□□□□ -1.7
EAR1YMR171C GUF1P46943 645 aa4.43□□□□□ -1.7
EAR1YMR171C YJL055WP47044 245 aa4.43□□□□□ -1.7
EAR1YMR171C RTT101P47050 842 aa4.43□□□□□ -1.7
EAR1YMR171C DIA3P52290 468 aa4.43□□□□□ -1.7
EAR1YMR171C EFM5P53200 248 aaKnown RBP4.43□□□□□ -1.7
EAR1YMR171C SED5Q01590 340 aa4.43□□□□□ -1.7
EAR1YMR171C PET117Q02771 107 aa4.43□□□□□ -1.7
EAR1YMR171C RPN9Q04062 393 aaKnown RBP4.43□□□□□ -1.7
EAR1YMR171C PEX12Q04370 399 aa4.43□□□□□ -1.7
EAR1YMR171C ARG7Q04728 441 aa4.43□□□□□ -1.7
EAR1YMR171C CRN1Q06440 651 aa4.43□□□□□ -1.7
EAR1YMR171C CRT10Q08226 957 aa4.43□□□□□ -1.7
EAR1YMR171C UAF30Q08747 228 aa4.43□□□□□ -1.7
EAR1YMR171C HUA2Q12134 243 aa4.43□□□□□ -1.7
EAR1YMR171C PNO1Q99216 274 aaKnown RBP4.43□□□□□ -1.7
EAR1YMR171C RPL7AP05737 244 aaKnown RBP4.42□□□□□ -1.7
EAR1YMR171C RHO1P06780 209 aaKnown RBP4.42□□□□□ -1.7
EAR1YMR171C RPA135P22138 1203 aaKnown RBP4.42□□□□□ -1.7
EAR1YMR171C AAT2P23542 418 aaKnown RBP4.42□□□□□ -1.7
EAR1YMR171C BUD23P25627 275 aaPredicted RBP4.42□□□□□ -1.7
EAR1YMR171C YIH1P25637 258 aa4.42□□□□□ -1.7
EAR1YMR171C BUB2P26448 306 aaPredicted RBP4.42□□□□□ -1.7
EAR1YMR171C ITR2P30606 609 aa4.42□□□□□ -1.7
EAR1YMR171C YMC1P32331 307 aa4.42□□□□□ -1.7
EAR1YMR171C COX13P32799 129 aa4.42□□□□□ -1.7
EAR1YMR171C YHR131CP38835 850 aa4.42□□□□□ -1.7
EAR1YMR171C SEO1P39709 593 aa4.42□□□□□ -1.7
EAR1YMR171C COA1P40452 197 aa4.42□□□□□ -1.7
EAR1YMR171C YRB2P40517 327 aa4.42□□□□□ -1.7
EAR1YMR171C YRB1P41920 201 aaKnown RBP4.42□□□□□ -1.7
EAR1YMR171C YFL015CP43578 164 aa4.42□□□□□ -1.7
EAR1YMR171C GCD14P46959 383 aaPredicted RBP4.42□□□□□ -1.7
EAR1YMR171C UPF3P48412 387 aaKnown RBP4.42□□□□□ -1.7
EAR1YMR171C COP1P53622 1201 aaKnown RBP4.42□□□□□ -1.7
EAR1YMR171C IBD2P53892 351 aa4.42□□□□□ -1.7
EAR1YMR171C YNL134CP53912 376 aaKnown RBP4.42□□□□□ -1.7
EAR1YMR171C CDC14Q00684 551 aa4.42□□□□□ -1.7
EAR1YMR171C PRP38Q00723 242 aaPredicted RBP4.42□□□□□ -1.7
EAR1YMR171C VID22Q05934 901 aa4.42□□□□□ -1.7
EAR1YMR171C YLR413WQ06689 675 aa4.42□□□□□ -1.7
EAR1YMR171C RPL7BQ12213 244 aaKnown RBP4.42□□□□□ -1.7
EAR1YMR171C COX17Q12287 69 aa4.42□□□□□ -1.7
EAR1YMR171C NSP1P14907 823 aaKnown RBP4.41□□□□□ -1.7
EAR1YMR171C UGA1P17649 471 aa4.41□□□□□ -1.7
EAR1YMR171C PUP3P25451 205 aaKnown RBP4.41□□□□□ -1.7
EAR1YMR171C URK1P27515 501 aa4.41□□□□□ -1.7
EAR1YMR171C BEM1P29366 551 aa4.41□□□□□ -1.7
EAR1YMR171C MRPL9P31334 269 aa4.41□□□□□ -1.7
EAR1YMR171C SAC1P32368 623 aaKnown RBP4.41□□□□□ -1.7
EAR1YMR171C APE2P32454 952 aaKnown RBP4.41□□□□□ -1.7
EAR1YMR171C YPK3P38070 525 aa4.41□□□□□ -1.7
EAR1YMR171C MTG2P38860 518 aa4.41□□□□□ -1.7
EAR1YMR171C AVT6P40074 448 aa4.41□□□□□ -1.7
EAR1YMR171C GLG2P47011 380 aa4.41□□□□□ -1.7
EAR1YMR171C YJR154WP47181 346 aa4.41□□□□□ -1.7
EAR1YMR171C BOL2P53082 120 aa4.41□□□□□ -1.7
EAR1YMR171C TRM12Q04235 462 aa4.41□□□□□ -1.7
EAR1YMR171C URC2Q04411 772 aa4.41□□□□□ -1.7
EAR1YMR171C AIM32Q04689 311 aa4.41□□□□□ -1.7
EAR1YMR171C HEL2Q05580 639 aaKnown RBP4.41□□□□□ -1.7
EAR1YMR171C STP3Q05937 343 aa4.41□□□□□ -1.7
EAR1YMR171C ECM30Q06673 1274 aa4.41□□□□□ -1.7
EAR1YMR171C VAM6Q07468 1049 aa4.41□□□□□ -1.7
EAR1YMR171C DTD1Q07648 150 aaKnown RBP4.41□□□□□ -1.7
EAR1YMR171C YDL242WQ07746 117 aa4.41□□□□□ -1.7
EAR1YMR171C YPL191CQ08930 360 aa4.41□□□□□ -1.7
EAR1YMR171C TRM8Q12009 286 aa4.41□□□□□ -1.7
EAR1YMR171C UBX3Q12229 455 aa4.41□□□□□ -1.7
EAR1YMR171C AHA1Q12449 350 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 95.9 ms