RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C PNS1Q12412 539 aa3.36□□□□□ -1.87
SHH3YMR118C RMD5Q12508 421 aa3.36□□□□□ -1.87
SHH3YMR118C SUS1Q6WNK7 96 aa3.36□□□□□ -1.87
SHH3YMR118C DST1P07273 309 aa3.35□□□□□ -1.87
SHH3YMR118C ALG7P07286 448 aa3.35□□□□□ -1.87
SHH3YMR118C GAL3P13045 520 aa3.35□□□□□ -1.87
SHH3YMR118C AMD1P15274 810 aaKnown RBP3.35□□□□□ -1.87
SHH3YMR118C MDH1P17505 334 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
SHH3YMR118C SIR1P21691 654 aa3.35□□□□□ -1.87
SHH3YMR118C SGV1P23293 657 aaKnown RBP3.35□□□□□ -1.87
SHH3YMR118C DBP2P24783 546 aaKnown RBP3.35□□□□□ -1.87
SHH3YMR118C YUR1P26725 428 aa3.35□□□□□ -1.87
SHH3YMR118C SDH3P33421 198 aa3.35□□□□□ -1.87
SHH3YMR118C TOD6P34219 525 aa3.35□□□□□ -1.87
SHH3YMR118C ANR2P36090 516 aaPredicted RBP3.35□□□□□ -1.87
SHH3YMR118C BAP2P38084 609 aa3.35□□□□□ -1.87
SHH3YMR118C YBR225WP38321 900 aa3.35□□□□□ -1.87
SHH3YMR118C YHL041WP38730 149 aa3.35□□□□□ -1.87
SHH3YMR118C YHR045WP38775 560 aa3.35□□□□□ -1.87
SHH3YMR118C DUN1P39009 513 aa3.35□□□□□ -1.87
SHH3YMR118C CDC1P40986 491 aa3.35□□□□□ -1.87
SHH3YMR118C MEP2P41948 499 aa3.35□□□□□ -1.87
SHH3YMR118C SKP2P42843 763 aa3.35□□□□□ -1.87
SHH3YMR118C RMD8P43620 662 aa3.35□□□□□ -1.87
SHH3YMR118C RET2P43621 546 aa3.35□□□□□ -1.87
SHH3YMR118C APS3P47064 194 aa3.35□□□□□ -1.87
SHH3YMR118C HXT16P47185 567 aa3.35□□□□□ -1.87
SHH3YMR118C SPC98P53540 846 aa3.35□□□□□ -1.87
SHH3YMR118C ZRG17P53735 605 aa3.35□□□□□ -1.87
SHH3YMR118C YNL181WP53878 407 aa3.35□□□□□ -1.87
SHH3YMR118C YPL071CQ02864 156 aa3.35□□□□□ -1.87
SHH3YMR118C HER2Q03557 464 aa3.35□□□□□ -1.87
SHH3YMR118C SEG1Q04279 960 aa3.35□□□□□ -1.87
SHH3YMR118C SPG3Q04398 127 aaPredicted RBP3.35□□□□□ -1.87
SHH3YMR118C EMI1Q04406 187 aa3.35□□□□□ -1.87
SHH3YMR118C YDR514CQ04408 483 aa3.35□□□□□ -1.87
SHH3YMR118C HRD3Q05787 833 aa3.35□□□□□ -1.87
SHH3YMR118C HDA2Q06629 674 aa3.35□□□□□ -1.87
SHH3YMR118C LDB18Q07887 179 aa3.35□□□□□ -1.87
SHH3YMR118C YPL199CQ08954 240 aa3.35□□□□□ -1.87
SHH3YMR118C YDL109CQ12103 647 aa3.35□□□□□ -1.87
SHH3YMR118C HAL9Q12180 1030 aa3.35□□□□□ -1.87
SHH3YMR118C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
SHH3YMR118C ICT1Q12385 394 aa3.35□□□□□ -1.87
SHH3YMR118C SNF8Q12483 233 aa3.35□□□□□ -1.87
SHH3YMR118C YOR019WQ99248 730 aa3.35□□□□□ -1.87
SHH3YMR118C ATP4P05626 244 aa3.34□□□□□ -1.87
SHH3YMR118C SIR3P06701 978 aa3.34□□□□□ -1.87
SHH3YMR118C SPT3P06844 337 aa3.34□□□□□ -1.87
SHH3YMR118C MAS1P10507 462 aa3.34□□□□□ -1.87
SHH3YMR118C MAS2P11914 482 aa3.34□□□□□ -1.87
SHH3YMR118C SAM35P14693 329 aa3.34□□□□□ -1.87
SHH3YMR118C NCP1P16603 691 aaKnown RBP3.34□□□□□ -1.87
SHH3YMR118C ERG9P29704 444 aa3.34□□□□□ -1.87
SHH3YMR118C CYS3P31373 394 aaKnown RBP3.34□□□□□ -1.87
SHH3YMR118C MSS51P32335 436 aa3.34□□□□□ -1.87
SHH3YMR118C RNP1P32385 249 aa3.34□□□□□ -1.87
SHH3YMR118C HYM1P32464 399 aa3.34□□□□□ -1.87
SHH3YMR118C TIM23P32897 222 aa3.34□□□□□ -1.87
SHH3YMR118C HIS7P33734 552 aaKnown RBP3.34□□□□□ -1.87
SHH3YMR118C JEN1P36035 616 aa3.34□□□□□ -1.87
SHH3YMR118C MNN2P38069 597 aa3.34□□□□□ -1.87
SHH3YMR118C IFA38P38286 347 aa3.34□□□□□ -1.87
SHH3YMR118C LEU5P38702 357 aa3.34□□□□□ -1.87
SHH3YMR118C LSM12P38828 187 aaKnown RBP3.34□□□□□ -1.87
SHH3YMR118C PLB1P39105 664 aa3.34□□□□□ -1.87
SHH3YMR118C AFG3P39925 761 aa3.34□□□□□ -1.87
SHH3YMR118C RRG9P40156 214 aa3.34□□□□□ -1.87
SHH3YMR118C RGI2P40188 164 aa3.34□□□□□ -1.87
SHH3YMR118C MPM1P40364 252 aa3.34□□□□□ -1.87
SHH3YMR118C IST3P40565 148 aaPredicted RBP3.34□□□□□ -1.87
SHH3YMR118C YJL218WP40892 196 aaKnown RBP3.34□□□□□ -1.87
SHH3YMR118C CAK1P43568 368 aaPredicted RBP3.34□□□□□ -1.87
SHH3YMR118C DLD2P46681 530 aaKnown RBP3.34□□□□□ -1.87
SHH3YMR118C MDV1P47025 714 aa3.34□□□□□ -1.87
SHH3YMR118C YJL049WP47048 450 aa3.34□□□□□ -1.87
SHH3YMR118C PET130P47065 347 aa3.34□□□□□ -1.87
SHH3YMR118C RPS12P48589 143 aaKnown RBP3.34□□□□□ -1.87
SHH3YMR118C TPN1P53099 579 aa3.34□□□□□ -1.87
SHH3YMR118C STR3P53101 465 aaKnown RBP3.34□□□□□ -1.87
SHH3YMR118C MKC7P53379 596 aa3.34□□□□□ -1.87
SHH3YMR118C VAC7P53950 1165 aa3.34□□□□□ -1.87
SHH3YMR118C MRPS16Q02608 121 aa3.34□□□□□ -1.87
SHH3YMR118C NUP116Q02630 1113 aa3.34□□□□□ -1.87
SHH3YMR118C TPP1Q03796 238 aa3.34□□□□□ -1.87
SHH3YMR118C YMR034CQ05131 434 aaPredicted RBP3.34□□□□□ -1.87
SHH3YMR118C PDR8Q06149 701 aa3.34□□□□□ -1.87
SHH3YMR118C ARO10Q06408 635 aa3.34□□□□□ -1.87
SHH3YMR118C YOL131WQ08270 108 aa3.34□□□□□ -1.87
SHH3YMR118C FEX1Q08913 375 aa3.34□□□□□ -1.87
SHH3YMR118C FEX2Q08991 375 aa3.34□□□□□ -1.87
SHH3YMR118C YDL177CQ12257 170 aa3.34□□□□□ -1.87
SHH3YMR118C RTN2Q12443 393 aa3.34□□□□□ -1.87
SHH3YMR118C Q0010Q9ZZX9 128 aa3.34□□□□□ -1.87
SHH3YMR118C FLP1P03870 423 aa3.33□□□□□ -1.88
SHH3YMR118C GAL80P04387 435 aa3.33□□□□□ -1.88
SHH3YMR118C SPS1P08458 490 aa3.33□□□□□ -1.88
SHH3YMR118C TY1A-LR4P0C2I8 440 aaKnown RBP3.33□□□□□ -1.88
SHH3YMR118C DSF1P0CX08 502 aa3.33□□□□□ -1.88
SHH3YMR118C YNR073CP0CX09 502 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms