RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C HXT3P32466 567 aaKnown RBP3.1□□□□□ -1.91
SUB1YMR039C LTV1P34078 463 aa3.1□□□□□ -1.91
SUB1YMR039C TCB2P48231 1178 aa3.1□□□□□ -1.91
SUB1YMR039C EOS1P53938 366 aa3.1□□□□□ -1.91
SUB1YMR039C ARX1Q03862 593 aaKnown RBP3.1□□□□□ -1.91
SUB1YMR039C GYL1Q04322 720 aa3.1□□□□□ -1.91
SUB1YMR039C DON1Q05610 365 aa3.1□□□□□ -1.91
SUB1YMR039C SNX3Q08826 162 aaKnown RBP3.1□□□□□ -1.91
SUB1YMR039C SPE3Q12074 293 aaKnown RBP3.1□□□□□ -1.91
SUB1YMR039C SKS1Q12505 502 aa3.1□□□□□ -1.91
SUB1YMR039C ISN1Q99312 450 aa3.1□□□□□ -1.91
SUB1YMR039C TEF1P02994 458 aaKnown RBP3.09□□□□□ -1.91
SUB1YMR039C SEC63P14906 663 aa3.09□□□□□ -1.91
SUB1YMR039C SLY1P22213 666 aa3.09□□□□□ -1.91
SUB1YMR039C SNT1P25357 1226 aa3.09□□□□□ -1.91
SUB1YMR039C DPH2P32461 534 aa3.09□□□□□ -1.91
SUB1YMR039C YME2P32843 850 aa3.09□□□□□ -1.91
SUB1YMR039C LYS1P38998 373 aaRIP-Chip data3.09□□□□□ -1.91 RIP-Chip
SUB1YMR039C FMS1P50264 508 aa3.09□□□□□ -1.91
SUB1YMR039C HOT1Q03213 719 aa3.09□□□□□ -1.91
SUB1YMR039C YDR286CQ05530 114 aa3.09□□□□□ -1.91
SUB1YMR039C SIL1Q08199 421 aa3.09□□□□□ -1.91
SUB1YMR039C RRP7P25368 297 aaPredicted RBP3.08□□□□□ -1.92
SUB1YMR039C KAR9P32526 644 aa3.08□□□□□ -1.92
SUB1YMR039C MUD1P32605 298 aaKnown RBP3.08□□□□□ -1.92
SUB1YMR039C RML2P32611 393 aa3.08□□□□□ -1.92
SUB1YMR039C ARA1P38115 344 aa3.08□□□□□ -1.92
SUB1YMR039C GDT1P38301 280 aaPredicted RBP3.08□□□□□ -1.92
SUB1YMR039C NTC20P38302 140 aaPredicted RBP3.08□□□□□ -1.92
SUB1YMR039C YHR054CP38780 354 aa3.08□□□□□ -1.92
SUB1YMR039C HAL1Q01766 294 aa3.08□□□□□ -1.92
SUB1YMR039C RRP45Q05636 305 aaKnown RBP3.08□□□□□ -1.92
SUB1YMR039C REX4Q08237 289 aa3.08□□□□□ -1.92
SUB1YMR039C CUE5Q08412 411 aaKnown RBP3.08□□□□□ -1.92
SUB1YMR039C MED2Q12124 431 aa3.08□□□□□ -1.92
SUB1YMR039C GPM3Q12326 303 aa3.08□□□□□ -1.92
SUB1YMR039C ORT1Q12375 292 aa3.08□□□□□ -1.92
SUB1YMR039C LSB5P25369 354 aa3.07□□□□□ -1.92
SUB1YMR039C POP5P28005 173 aa3.07□□□□□ -1.92
SUB1YMR039C KKQ8P36004 724 aa3.07□□□□□ -1.92
SUB1YMR039C UIP5P36137 443 aa3.07□□□□□ -1.92
SUB1YMR039C SLM4P38247 162 aa3.07□□□□□ -1.92
SUB1YMR039C POP2P39008 433 aa3.07□□□□□ -1.92
SUB1YMR039C SAS2P40963 338 aa3.07□□□□□ -1.92
SUB1YMR039C YGR111WP53265 400 aa3.07□□□□□ -1.92
SUB1YMR039C SKO1Q02100 647 aa3.07□□□□□ -1.92
SUB1YMR039C YDR341CQ05506 607 aaKnown RBP3.07□□□□□ -1.92
SUB1YMR039C IRC25Q07951 179 aa3.07□□□□□ -1.92
SUB1YMR039C HSP42Q12329 375 aa3.07□□□□□ -1.92
SUB1YMR039C CYC3P06182 269 aa3.06□□□□□ -1.92
SUB1YMR039C PCL1P24867 279 aa3.06□□□□□ -1.92
SUB1YMR039C ERV1P27882 189 aa3.06□□□□□ -1.92
SUB1YMR039C MSP1P28737 362 aa3.06□□□□□ -1.92
SUB1YMR039C BRF1P29056 596 aa3.06□□□□□ -1.92
SUB1YMR039C HEL1P36113 551 aa3.06□□□□□ -1.92
SUB1YMR039C UTH1P36135 365 aa3.06□□□□□ -1.92
SUB1YMR039C DAD2P36162 133 aa3.06□□□□□ -1.92
SUB1YMR039C RFC3P38629 340 aa3.06□□□□□ -1.92
SUB1YMR039C RPS0BP46654 252 aaKnown RBP3.06□□□□□ -1.92
SUB1YMR039C YJR011CP47086 261 aaPredicted RBP3.06□□□□□ -1.92
SUB1YMR039C BRO1P48582 844 aa3.06□□□□□ -1.92
SUB1YMR039C YGL138CP53122 345 aa3.06□□□□□ -1.92
SUB1YMR039C YPL107WQ02873 248 aa3.06□□□□□ -1.92
SUB1YMR039C PRP42Q03776 544 aaKnown RBP3.06□□□□□ -1.92
SUB1YMR039C DCI1Q08558 271 aa3.06□□□□□ -1.92
SUB1YMR039C RPN5Q12250 445 aaKnown RBP3.06□□□□□ -1.92
SUB1YMR039C RMD5Q12508 421 aa3.06□□□□□ -1.92
SUB1YMR039C TRX1P22217 103 aaKnown RBP3.05□□□□□ -1.92
SUB1YMR039C MRP21P38175 177 aa3.05□□□□□ -1.92
SUB1YMR039C HMS2P47175 358 aa3.05□□□□□ -1.92
SUB1YMR039C COS5P47187 383 aa3.05□□□□□ -1.92
SUB1YMR039C COS7Q07788 383 aa3.05□□□□□ -1.92
SUB1YMR039C NFI1Q12216 726 aa3.05□□□□□ -1.92
SUB1YMR039C FRE6Q12473 712 aa3.05□□□□□ -1.92
SUB1YMR039C STF1P01098 86 aa3.04□□□□□ -1.92
SUB1YMR039C RPL6BP05739 176 aaKnown RBP3.04□□□□□ -1.92
SUB1YMR039C HSP26P15992 214 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
SUB1YMR039C SPO7P18410 259 aa3.04□□□□□ -1.92
SUB1YMR039C CLN1P20437 546 aa3.04□□□□□ -1.92
SUB1YMR039C PHO84P25297 587 aaKnown RBP3.04□□□□□ -1.92
SUB1YMR039C SIN4P32259 974 aa3.04□□□□□ -1.92
SUB1YMR039C LAS1P36146 502 aaPredicted RBP3.04□□□□□ -1.92
SUB1YMR039C EFM4P40516 257 aa3.04□□□□□ -1.92
SUB1YMR039C GAB1P41733 394 aa3.04□□□□□ -1.92
SUB1YMR039C MPP10P47083 593 aaKnown RBP3.04□□□□□ -1.92
SUB1YMR039C GPI8P49018 411 aa3.04□□□□□ -1.92
SUB1YMR039C MLC1P53141 149 aa3.04□□□□□ -1.92
SUB1YMR039C RPT4P53549 437 aaKnown RBP3.04□□□□□ -1.92
SUB1YMR039C RPL6AQ02326 176 aaKnown RBP3.04□□□□□ -1.92
SUB1YMR039C BET5Q03630 159 aa3.04□□□□□ -1.92
SUB1YMR039C ACL4Q03771 387 aa3.04□□□□□ -1.92
SUB1YMR039C MMR1Q06324 491 aa3.04□□□□□ -1.92
SUB1YMR039C SKI7Q08491 747 aaPredicted RBP3.04□□□□□ -1.92
SUB1YMR039C VPS54Q12071 889 aa3.04□□□□□ -1.92
SUB1YMR039C RPL1AP0CX43 217 aaKnown RBP3.03□□□□□ -1.92
SUB1YMR039C RPL1BP0CX44 217 aaKnown RBP3.03□□□□□ -1.92
SUB1YMR039C DAL5P15365 543 aa3.03□□□□□ -1.92
SUB1YMR039C CTR86P25355 563 aa3.03□□□□□ -1.92
SUB1YMR039C RHB1P25378 209 aa3.03□□□□□ -1.92
SUB1YMR039C POT1P27796 417 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms