RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W IMA2Q08295 589 aa3.99□□□□□ -1.77
SPO20YMR017W TMS1Q12116 473 aa3.99□□□□□ -1.77
SPO20YMR017W ATG34Q12292 412 aa3.99□□□□□ -1.77
SPO20YMR017W GPM3Q12326 303 aa3.99□□□□□ -1.77
SPO20YMR017W RAD57P25301 460 aa3.98□□□□□ -1.77
SPO20YMR017W SWH1P35845 1188 aa3.98□□□□□ -1.77
SPO20YMR017W HER2Q03557 464 aa3.98□□□□□ -1.77
SPO20YMR017W URH1Q04179 340 aa3.98□□□□□ -1.77
SPO20YMR017W GYL1Q04322 720 aa3.98□□□□□ -1.77
SPO20YMR017W SNT309Q06091 175 aaPredicted RBP3.98□□□□□ -1.77
SPO20YMR017W MRPL35Q06678 367 aa3.98□□□□□ -1.77
SPO20YMR017W TRP1P00912 224 aa3.97□□□□□ -1.77
SPO20YMR017W LTV1P34078 463 aa3.97□□□□□ -1.77
SPO20YMR017W YOX1P34161 385 aa3.97□□□□□ -1.77
SPO20YMR017W YBR056WP38081 501 aa3.97□□□□□ -1.77
SPO20YMR017W FAD1P38913 306 aa3.97□□□□□ -1.77
SPO20YMR017W GAT2P40209 560 aa3.97□□□□□ -1.77
SPO20YMR017W REE1P40893 198 aa3.97□□□□□ -1.77
SPO20YMR017W YGR210CP42942 411 aa3.97□□□□□ -1.77
SPO20YMR017W BUD27P43573 796 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
SPO20YMR017W RPN9Q04062 393 aaKnown RBP3.97□□□□□ -1.77
SPO20YMR017W BCH1Q05029 724 aa3.97□□□□□ -1.77
SPO20YMR017W YLR456WQ06199 204 aa3.97□□□□□ -1.77
SPO20YMR017W DCI1Q08558 271 aa3.97□□□□□ -1.77
SPO20YMR017W UAF30Q08747 228 aa3.97□□□□□ -1.77
SPO20YMR017W OLA1P38219 394 aaKnown RBP3.96□□□□□ -1.78
SPO20YMR017W YPS6P40583 537 aa3.96□□□□□ -1.78
SPO20YMR017W PRP42Q03776 544 aaKnown RBP3.96□□□□□ -1.78
SPO20YMR017W JLP2P40206 208 aa3.95□□□□□ -1.78
SPO20YMR017W LCB2P40970 561 aa3.95□□□□□ -1.78
SPO20YMR017W SFH5P47008 294 aa3.95□□□□□ -1.78
SPO20YMR017W BTN2P53286 410 aa3.95□□□□□ -1.78
SPO20YMR017W MTM1P53320 366 aa3.95□□□□□ -1.78
SPO20YMR017W RHO5P53879 331 aaKnown RBP3.95□□□□□ -1.78
SPO20YMR017W RRP9Q06506 573 aaKnown RBP3.95□□□□□ -1.78
SPO20YMR017W SUP35P05453 685 aaKnown RBP3.94□□□□□ -1.78
SPO20YMR017W CYC3P06182 269 aa3.94□□□□□ -1.78
SPO20YMR017W PET123P17558 318 aa3.94□□□□□ -1.78
SPO20YMR017W RIM1P32445 135 aaKnown RBP3.94□□□□□ -1.78
SPO20YMR017W CYS4P32582 507 aaKnown RBP3.94□□□□□ -1.78
SPO20YMR017W MSG5P38590 489 aa3.94□□□□□ -1.78
SPO20YMR017W STD1Q02794 444 aa3.94□□□□□ -1.78
SPO20YMR017W MMT1Q03218 510 aa3.94□□□□□ -1.78
SPO20YMR017W HRI1Q05905 244 aaKnown RBP3.94□□□□□ -1.78
SPO20YMR017W SPE3Q12074 293 aaKnown RBP3.94□□□□□ -1.78
SPO20YMR017W RUP1Q12242 671 aa3.94□□□□□ -1.78
SPO20YMR017W TPT1Q12272 230 aaKnown RBP3.94□□□□□ -1.78
SPO20YMR017W RPS8AP0CX39 200 aaKnown RBP3.93□□□□□ -1.78
SPO20YMR017W RPS8BP0CX40 200 aaKnown RBP3.93□□□□□ -1.78
SPO20YMR017W DAL2P25335 343 aa3.93□□□□□ -1.78
SPO20YMR017W MNS1P32906 549 aa3.93□□□□□ -1.78
SPO20YMR017W LRP1P38801 184 aaKnown RBP3.93□□□□□ -1.78
SPO20YMR017W STN1P38960 494 aa3.93□□□□□ -1.78
SPO20YMR017W YJL055WP47044 245 aa3.93□□□□□ -1.78
SPO20YMR017W CWC25P53854 179 aaKnown RBP3.93□□□□□ -1.78
SPO20YMR017W DST1P07273 309 aa3.92□□□□□ -1.78
SPO20YMR017W NFT1P0CE68 1218 aa3.92□□□□□ -1.78
SPO20YMR017W CLN3P13365 580 aa3.92□□□□□ -1.78
SPO20YMR017W PEX5P35056 612 aa3.92□□□□□ -1.78
SPO20YMR017W CHK1P38147 527 aa3.92□□□□□ -1.78
SPO20YMR017W YER079WP40052 210 aaKnown RBP3.92□□□□□ -1.78
SPO20YMR017W PAN6P40459 309 aa3.92□□□□□ -1.78
SPO20YMR017W CHS6P40955 746 aa3.92□□□□□ -1.78
SPO20YMR017W PIB2P53191 635 aa3.92□□□□□ -1.78
SPO20YMR017W MDG1P53885 366 aa3.92□□□□□ -1.78
SPO20YMR017W VPS9P54787 451 aa3.92□□□□□ -1.78
SPO20YMR017W SXM1Q04175 944 aaKnown RBP3.92□□□□□ -1.78
SPO20YMR017W YDR341CQ05506 607 aaKnown RBP3.92□□□□□ -1.78
SPO20YMR017W RPN5Q12250 445 aaKnown RBP3.92□□□□□ -1.78
SPO20YMR017W YRM1Q12340 786 aa3.92□□□□□ -1.78
SPO20YMR017W PDE2P06776 526 aa3.91□□□□□ -1.78
SPO20YMR017W CDC21P06785 304 aa3.91□□□□□ -1.78
SPO20YMR017W REV1P12689 985 aa3.91□□□□□ -1.78
SPO20YMR017W YCL068CP25593 260 aa3.91□□□□□ -1.78
SPO20YMR017W CDC60P26637 1090 aaKnown RBP3.91□□□□□ -1.78
SPO20YMR017W POP5P28005 173 aa3.91□□□□□ -1.78
SPO20YMR017W HSP104P31539 908 aaKnown RBP3.91□□□□□ -1.78
SPO20YMR017W KAR9P32526 644 aa3.91□□□□□ -1.78
SPO20YMR017W ATP3P38077 311 aaKnown RBP3.91□□□□□ -1.78
SPO20YMR017W SWD3P38123 315 aa3.91□□□□□ -1.78
SPO20YMR017W SDS24P38314 527 aa3.91□□□□□ -1.78
SPO20YMR017W STP2P38704 541 aa3.91□□□□□ -1.78
SPO20YMR017W GPI16P38875 610 aa3.91□□□□□ -1.78
SPO20YMR017W SIM1P40472 476 aa3.91□□□□□ -1.78
SPO20YMR017W EFM4P40516 257 aa3.91□□□□□ -1.78
SPO20YMR017W BRO1P48582 844 aa3.91□□□□□ -1.78
SPO20YMR017W RAX1Q08760 435 aa3.91□□□□□ -1.78
SPO20YMR017W RRG7Q08774 242 aaPredicted RBP3.91□□□□□ -1.78
SPO20YMR017W PAR32Q12515 295 aaKnown RBP3.91□□□□□ -1.78
SPO20YMR017W ALG1P16661 449 aa3.9□□□□□ -1.79
SPO20YMR017W ISY1P21374 235 aaPredicted RBP3.9□□□□□ -1.79
SPO20YMR017W MNE1P24720 663 aa3.9□□□□□ -1.79
SPO20YMR017W YKL097CP34245 136 aa3.9□□□□□ -1.79
SPO20YMR017W RRP1P35178 278 aaPredicted RBP3.9□□□□□ -1.79
SPO20YMR017W INM1P38710 295 aa3.9□□□□□ -1.79
SPO20YMR017W CCE1Q03702 353 aa3.9□□□□□ -1.79
SPO20YMR017W HRT3Q12347 344 aa3.9□□□□□ -1.79
SPO20YMR017W SNU66Q12420 587 aaPredicted RBP3.9□□□□□ -1.79
SPO20YMR017W ADH2P00331 348 aaKnown RBP3.89□□□□□ -1.79
SPO20YMR017W YEL045CP32616 141 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms