RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C SIF2P38262 535 aa1.23□□□□□ -2.21
NUP188YML103C PEX18P38855 283 aa1.23□□□□□ -2.21
NUP188YML103C MDM31P38880 579 aa1.23□□□□□ -2.21
NUP188YML103C YDR089WP38966 869 aa1.23□□□□□ -2.21
NUP188YML103C YJL070CP40361 888 aa1.23□□□□□ -2.21
NUP188YML103C YIL152WP40455 235 aa1.23□□□□□ -2.21
NUP188YML103C HXT9P40885 567 aa1.23□□□□□ -2.21
NUP188YML103C HMS2P47175 358 aa1.23□□□□□ -2.21
NUP188YML103C CRZ1P53968 678 aa1.23□□□□□ -2.21
NUP188YML103C SMA2Q04658 369 aa1.23□□□□□ -2.21
NUP188YML103C BCP1Q06338 283 aa1.23□□□□□ -2.21
NUP188YML103C CUE5Q08412 411 aaKnown RBP1.23□□□□□ -2.21
NUP188YML103C HMS1Q12398 434 aa1.23□□□□□ -2.21
NUP188YML103C RRP12Q12754 1228 aaKnown RBP1.23□□□□□ -2.21
NUP188YML103C BNR1P40450 1375 aa1.22□□□□□ -2.21
NUP188YML103C NDC1P32500 655 aa1.22□□□□□ -2.21
NUP188YML103C SOR1P35497 357 aaKnown RBP1.22□□□□□ -2.21
NUP188YML103C ASC1P38011 319 aaKnown RBP1.22□□□□□ -2.21
NUP188YML103C YHR122WP38829 231 aa1.22□□□□□ -2.21
NUP188YML103C SSO2P39926 295 aa1.22□□□□□ -2.21
NUP188YML103C SHO1P40073 367 aa1.22□□□□□ -2.21
NUP188YML103C PCL7P40186 285 aa1.22□□□□□ -2.21
NUP188YML103C SHE4P51534 789 aa1.22□□□□□ -2.21
NUP188YML103C CUE3P53137 624 aaKnown RBP1.22□□□□□ -2.21
NUP188YML103C CLD1P53264 445 aa1.22□□□□□ -2.21
NUP188YML103C YGR117CP53270 476 aa1.22□□□□□ -2.21
NUP188YML103C RET3P53600 189 aa1.22□□□□□ -2.21
NUP188YML103C URC2Q04411 772 aa1.22□□□□□ -2.21
NUP188YML103C DTD1Q07648 150 aaKnown RBP1.22□□□□□ -2.21
NUP188YML103C SOR2Q07786 357 aa1.22□□□□□ -2.21
NUP188YML103C FRE7Q12333 620 aa1.22□□□□□ -2.21
NUP188YML103C YER145C-AA0A023PYF4 145 aa1.22□□□□□ -2.21
NUP188YML103C HHF1P02309 103 aaKnown RBP1.22□□□□□ -2.21
NUP188YML103C ATP1P07251 545 aaKnown RBP1.22□□□□□ -2.21
NUP188YML103C MAS1P10507 462 aa1.22□□□□□ -2.21
NUP188YML103C AMD1P15274 810 aaKnown RBP1.22□□□□□ -2.21
NUP188YML103C FRE1P32791 686 aa1.22□□□□□ -2.21
NUP188YML103C SIP2P34164 415 aaKnown RBP1.22□□□□□ -2.21
NUP188YML103C YSW1P38280 609 aa1.22□□□□□ -2.21
NUP188YML103C YHR182WP38870 785 aa1.22□□□□□ -2.21
NUP188YML103C FAD1P38913 306 aa1.22□□□□□ -2.21
NUP188YML103C COX14P39103 70 aa1.22□□□□□ -2.21
NUP188YML103C ATM1P40416 690 aa1.22□□□□□ -2.21
NUP188YML103C EFM4P40516 257 aa1.22□□□□□ -2.21
NUP188YML103C SAD1P43589 448 aa1.22□□□□□ -2.21
NUP188YML103C IKS1P47042 667 aa1.22□□□□□ -2.21
NUP188YML103C YGL242CP53066 181 aa1.22□□□□□ -2.21
NUP188YML103C YNL146WP53906 100 aa1.22□□□□□ -2.21
NUP188YML103C YPL068CQ02749 293 aa1.22□□□□□ -2.21
NUP188YML103C YDR387CQ04162 555 aa1.22□□□□□ -2.21
NUP188YML103C SRL2Q12020 392 aa1.22□□□□□ -2.21
NUP188YML103C RPL20AP0CX23 172 aaKnown RBP1.22□□□□□ -2.21
NUP188YML103C RPL20BP0CX24 172 aaPredicted RBP1.22□□□□□ -2.21
NUP188YML103C PUT4P15380 627 aa1.22□□□□□ -2.21
NUP188YML103C PMU1P36069 295 aa1.22□□□□□ -2.21
NUP188YML103C MST28P39552 234 aa1.22□□□□□ -2.21
NUP188YML103C XBP1P40489 647 aa1.22□□□□□ -2.21
NUP188YML103C SYG1P40528 902 aa1.22□□□□□ -2.21
NUP188YML103C YGL114WP53134 725 aa1.22□□□□□ -2.21
NUP188YML103C MDM30Q05930 598 aa1.22□□□□□ -2.21
NUP188YML103C REX3Q12090 404 aa1.22□□□□□ -2.21
NUP188YML103C YLR112WQ12130 139 aa1.22□□□□□ -2.21
NUP188YML103C TEF1P02994 458 aaKnown RBP1.21□□□□□ -2.21
NUP188YML103C GLN3P18494 730 aa1.21□□□□□ -2.21
NUP188YML103C POT1P27796 417 aaKnown RBP RIP-Chip data1.21□□□□□ -2.21not detected
NUP188YML103C SUR1P33300 382 aa1.21□□□□□ -2.21
NUP188YML103C LSM12P38828 187 aaKnown RBP1.21□□□□□ -2.21
NUP188YML103C LCP5P40079 357 aaPredicted RBP1.21□□□□□ -2.21
NUP188YML103C SNL1P40548 159 aa1.21□□□□□ -2.21
NUP188YML103C AZF1P41696 914 aa1.21□□□□□ -2.21
NUP188YML103C STE24P47154 453 aa1.21□□□□□ -2.21
NUP188YML103C EFM3P47163 339 aa1.21□□□□□ -2.21
NUP188YML103C SCW4P53334 386 aaKnown RBP1.21□□□□□ -2.21
NUP188YML103C YIF1P53845 314 aaKnown RBP1.21□□□□□ -2.21
NUP188YML103C ERV25P54837 211 aaKnown RBP1.21□□□□□ -2.21
NUP188YML103C THI7Q05998 598 aa1.21□□□□□ -2.21
NUP188YML103C YLH47Q06493 454 aa1.21□□□□□ -2.21
NUP188YML103C YPR078CQ06813 372 aa1.21□□□□□ -2.21
NUP188YML103C NOP6Q07623 225 aaKnown RBP1.21□□□□□ -2.21
NUP188YML103C CMS1Q07897 291 aaKnown RBP1.21□□□□□ -2.21
NUP188YML103C NRT1Q08485 598 aa1.21□□□□□ -2.21
NUP188YML103C RMD5Q12508 421 aa1.21□□□□□ -2.21
NUP188YML103C POM152P39685 1337 aa1.21□□□□□ -2.22
NUP188YML103C GRR1P24814 1151 aa1.21□□□□□ -2.22
NUP188YML103C PRR1P28708 518 aa1.21□□□□□ -2.22
NUP188YML103C PRO3P32263 286 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C MUD1P32605 298 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C FRE2P36033 711 aa1.21□□□□□ -2.22
NUP188YML103C MRPL40P36534 297 aa1.21□□□□□ -2.22
NUP188YML103C ADH5P38113 351 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C PEX32P38292 413 aa1.21□□□□□ -2.22
NUP188YML103C ARC40P38328 384 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C LIN1P38852 340 aaPredicted RBP1.21□□□□□ -2.22
NUP188YML103C HAT2P39984 401 aa1.21□□□□□ -2.22
NUP188YML103C ISC1P40015 477 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C SER3P40054 469 aa1.21□□□□□ -2.22
NUP188YML103C LYS12P40495 371 aaKnown RBP1.21□□□□□ -2.22
NUP188YML103C RRP46P53256 223 aaPredicted RBP1.21□□□□□ -2.22
NUP188YML103C BUD32P53323 261 aa1.21□□□□□ -2.22
NUP188YML103C LSC1P53598 329 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 58.3 ms