RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	CMK2	P22517	447 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	VMA16	P23968	213 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	GIT1	P25346	518 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	BOS1	P25385	244 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	VAC17	P25591	423 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	YCR101C	P25607	182 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	BUD23	P25627	275 aa	Predicted RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	YCR090C	P25654	182 aa	Known RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	NIC96	P34077	839 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	YDR089W	P38966	869 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	SSN3	P39073	555 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	CCT6	P39079	546 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	PZF1	P39933	429 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	SPF1	P39986	1215 aa	Known RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	TIF34	P40217	347 aa	Known RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	NAS2	P40555	220 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	IRC24	P40580	263 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	MNN10	P50108	393 aa	Known RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	AIF1	P52923	378 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	YGR042W	P53227	271 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	CLD1	P53264	445 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	YAP1802	P53309	568 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	EMI1	Q04406	187 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	YDR514C	Q04408	483 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	DCR2	Q05924	578 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	TMA46	Q12000	345 aa	Known RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	PUS9	Q12069	462 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	ISA2	Q12425	185 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	MTR10	Q99189	972 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	HEM2	P05373	342 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	RHO2	P06781	192 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	KGD1	P20967	1014 aa	Known RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	SNT1	P25357	1226 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	NGG1	P32494	702 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	SUA5	P32579	426 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	SKT5	P34226	696 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	MDJ1	P35191	511 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	MTH1	P35198	433 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	VRP1	P37370	817 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	LNP1	P38878	278 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	LSM5	P40089	93 aa	Known RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	GPP2	P40106	250 aa	Known RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	ICE2	P40499	491 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	GAT1	P43574	510 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	MPS3	P47069	682 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	ROM1	P53046	1155 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	TRM12	Q04235	462 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	YPQ2	Q06328	317 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	OPT2	Q06593	877 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	ENT4	Q07872	247 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	AKR2	Q12013	749 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	PFK27	Q12471	397 aa	Predicted RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	YCL001W-B	Q96VH2	84 aa		4.72	□□□□□ -1.65
DOA1	YKL213C	PHO5	P00635	467 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	RAD7	P06779	565 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	YAR066W	P0CX18	203 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	YHR214W	P0CX19	203 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	KIN2	P13186	1147 aa	Known RBP	4.71	□□□□□ -1.66
DOA1	YKL213C	CIN8	P27895	1000 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	RPD3	P32561	433 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	MKS1	P34072	584 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	MAE1	P36013	669 aa	Known RBP	4.71	□□□□□ -1.66
DOA1	YKL213C	RPF2	P36160	344 aa	Known RBP	4.71	□□□□□ -1.66
DOA1	YKL213C	FES1	P38260	290 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	YHR045W	P38775	560 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	PFS1	P38872	237 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	PRM2	P40534	656 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	IMD3	P50095	523 aa	Known RBP	4.71	□□□□□ -1.66
DOA1	YKL213C	YGR250C	P53316	781 aa	Known RBP	4.71	□□□□□ -1.66
DOA1	YKL213C	SNF12	P53628	566 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	IBD2	P53892	351 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	TVP15	Q03860	143 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	RAD30	Q04049	632 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	GTO3	Q04806	366 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	VPS68	Q12016	184 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	TGS1	Q12052	315 aa		4.71	□□□□□ -1.66
DOA1	YKL213C	COX3	P00420	269 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	SWI5	P08153	709 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	YSR3	P23501	404 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	RRP7	P25368	297 aa	Predicted RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	RRP3	P38712	501 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	DHH1	P39517	506 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	SEN34	P39707	275 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	ATF1	P40353	525 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	COA1	P40452	197 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	YPS6	P40583	537 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	BIR1	P47134	954 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	YJR141W	P47172	347 aa	Predicted RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	TIS11	P47977	285 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	ZRG17	P53735	605 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	LSM3	P57743	89 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	BCH1	Q05029	724 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	UTP21	Q06078	939 aa	Predicted RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	YOL019W	Q08157	551 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	MUM3	Q08750	479 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	RTK1	Q12100	620 aa	Predicted RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	CBP6	P07253	162 aa	Predicted RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	GAL7	P08431	366 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	CTR86	P25355	563 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	ATP11	P32453	318 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms