RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W FUR1P18562 216 aaKnown RBP10.65□□□□□ -0.7
SIM1YIL123W GDH2P33327 1092 aaKnown RBP10.65□□□□□ -0.7
SIM1YIL123W LHP1P33399 275 aaKnown RBP10.65□□□□□ -0.7
SIM1YIL123W LOT5P34234 306 aa10.65□□□□□ -0.7
SIM1YIL123W BAT1P38891 393 aaKnown RBP10.65□□□□□ -0.7
SIM1YIL123W PLB1P39105 664 aa10.65□□□□□ -0.7
SIM1YIL123W KRE29P40026 464 aa10.65□□□□□ -0.7
SIM1YIL123W ZIM17P42844 174 aa10.65□□□□□ -0.7
SIM1YIL123W CAK1P43568 368 aaPredicted RBP10.65□□□□□ -0.7
SIM1YIL123W BIT61P47041 543 aa10.65□□□□□ -0.7
SIM1YIL123W STE24P47154 453 aa10.65□□□□□ -0.7
SIM1YIL123W ROG1P53118 685 aa10.65□□□□□ -0.7
SIM1YIL123W HXT15P54854 567 aa10.65□□□□□ -0.7
SIM1YIL123W SRL4Q03085 281 aa10.65□□□□□ -0.7
SIM1YIL123W MSC1Q03104 513 aa10.65□□□□□ -0.7
SIM1YIL123W FMP42Q04991 504 aa10.65□□□□□ -0.7
SIM1YIL123W PUS9Q12069 462 aa10.65□□□□□ -0.7
SIM1YIL123W YPR022CQ12139 1133 aa10.65□□□□□ -0.7
SIM1YIL123W GLE1Q12315 538 aa10.65□□□□□ -0.7
SIM1YIL123W MF(ALPHA)1P01149 165 aa10.64□□□□□ -0.71
SIM1YIL123W RER1P25560 188 aa10.64□□□□□ -0.71
SIM1YIL123W PIM1P36775 1133 aa10.64□□□□□ -0.71
SIM1YIL123W BNA4P38169 460 aa10.64□□□□□ -0.71
SIM1YIL123W YHR112CP38716 378 aa10.64□□□□□ -0.71
SIM1YIL123W FMO1P38866 432 aa10.64□□□□□ -0.71
SIM1YIL123W YAL037WP39728 267 aa10.64□□□□□ -0.71
SIM1YIL123W PRE6P40303 254 aaKnown RBP10.64□□□□□ -0.71
SIM1YIL123W IRC5P43610 853 aa10.64□□□□□ -0.71
SIM1YIL123W YJL049WP47048 450 aa10.64□□□□□ -0.71
SIM1YIL123W ESF2P53743 316 aaKnown RBP10.64□□□□□ -0.71
SIM1YIL123W BIO5P53744 561 aaKnown RBP10.64□□□□□ -0.71
SIM1YIL123W YNL181WP53878 407 aa10.64□□□□□ -0.71
SIM1YIL123W MAP1Q01662 387 aaKnown RBP RIP-Chip data10.64□□□□□ -0.71not detected
SIM1YIL123W YLR126CQ12288 251 aa10.64□□□□□ -0.71
SIM1YIL123W MRX4Q12467 430 aa10.64□□□□□ -0.71
SIM1YIL123W DBP3P20447 523 aaKnown RBP10.63□□□□□ -0.71
SIM1YIL123W PPH21P23594 369 aa10.63□□□□□ -0.71
SIM1YIL123W BUB3P26449 341 aa10.63□□□□□ -0.71
SIM1YIL123W YIM1P28625 365 aa10.63□□□□□ -0.71
SIM1YIL123W SSH4P32343 579 aa10.63□□□□□ -0.71
SIM1YIL123W ERG1P32476 496 aaKnown RBP10.63□□□□□ -0.71
SIM1YIL123W ZTA1P38230 334 aaKnown RBP10.63□□□□□ -0.71
SIM1YIL123W FAU1P40099 211 aa10.63□□□□□ -0.71
SIM1YIL123W YFL066CP43538 392 aa10.63□□□□□ -0.71
SIM1YIL123W YGR250CP53316 781 aaKnown RBP10.63□□□□□ -0.71
SIM1YIL123W ARO10Q06408 635 aa10.63□□□□□ -0.71
SIM1YIL123W HER1Q12276 1246 aa10.63□□□□□ -0.71
SIM1YIL123W TRM10Q12400 293 aa10.63□□□□□ -0.71
SIM1YIL123W COX3P00420 269 aa10.62□□□□□ -0.71
SIM1YIL123W HTS1P07263 546 aaKnown RBP10.62□□□□□ -0.71
SIM1YIL123W MRPL32P25348 183 aa10.62□□□□□ -0.71
SIM1YIL123W MKK1P32490 508 aa10.62□□□□□ -0.71
SIM1YIL123W MAE1P36013 669 aaKnown RBP10.62□□□□□ -0.71
SIM1YIL123W AHP1P38013 176 aaKnown RBP10.62□□□□□ -0.71
SIM1YIL123W YHR033WP38690 423 aa10.62□□□□□ -0.71
SIM1YIL123W PFS1P38872 237 aa10.62□□□□□ -0.71
SIM1YIL123W IPT1P38954 527 aa10.62□□□□□ -0.71
SIM1YIL123W PCF11P39081 626 aaPredicted RBP10.62□□□□□ -0.71
SIM1YIL123W AIM2P39721 246 aa10.62□□□□□ -0.71
SIM1YIL123W TIF34P40217 347 aaKnown RBP10.62□□□□□ -0.71
SIM1YIL123W YIL108WP40483 696 aaKnown RBP10.62□□□□□ -0.71
SIM1YIL123W LYS12P40495 371 aaKnown RBP10.62□□□□□ -0.71
SIM1YIL123W RBL2P48606 106 aaKnown RBP10.62□□□□□ -0.71
SIM1YIL123W YGR079WP53249 370 aa10.62□□□□□ -0.71
SIM1YIL123W CSL4P53859 292 aaPredicted RBP10.62□□□□□ -0.71
SIM1YIL123W MET17P06106 444 aa10.61□□□□□ -0.71
SIM1YIL123W HOM2P13663 365 aaKnown RBP10.61□□□□□ -0.71
SIM1YIL123W RRP7P25368 297 aaPredicted RBP10.61□□□□□ -0.71
SIM1YIL123W IDH1P28834 360 aaKnown RBP RIP-Chip data10.61□□□□□ -0.71not detected
SIM1YIL123W NTH1P32356 751 aa10.61□□□□□ -0.71
SIM1YIL123W GSH1P32477 678 aa10.61□□□□□ -0.71
SIM1YIL123W NUF2P33895 451 aa10.61□□□□□ -0.71
SIM1YIL123W UTP11P34247 250 aaPredicted RBP10.61□□□□□ -0.71
SIM1YIL123W DOA1P36037 715 aa10.61□□□□□ -0.71
SIM1YIL123W TCD2P36101 447 aaKnown RBP10.61□□□□□ -0.71
SIM1YIL123W WSC4P38739 605 aa10.61□□□□□ -0.71
SIM1YIL123W ISC1P40015 477 aaKnown RBP10.61□□□□□ -0.71
SIM1YIL123W YJL068CP40363 299 aa10.61□□□□□ -0.71
SIM1YIL123W PAC11P40960 533 aa10.61□□□□□ -0.71
SIM1YIL123W FAA4P47912 694 aaKnown RBP10.61□□□□□ -0.71
SIM1YIL123W SHE4P51534 789 aa10.61□□□□□ -0.71
SIM1YIL123W ROM1P53046 1155 aa10.61□□□□□ -0.71
SIM1YIL123W YGR054WP53235 642 aaKnown RBP10.61□□□□□ -0.71
SIM1YIL123W ASI1P54074 624 aa10.61□□□□□ -0.71
SIM1YIL123W ZWF1P11412 505 aaKnown RBP10.6□□□□□ -0.71
SIM1YIL123W SRX1P36077 127 aa10.6□□□□□ -0.71
SIM1YIL123W TPA1P40032 644 aaKnown RBP10.6□□□□□ -0.71
SIM1YIL123W SNF12P53628 566 aa10.6□□□□□ -0.71
SIM1YIL123W CWC24P53769 259 aa10.6□□□□□ -0.71
SIM1YIL123W RIM13Q03792 727 aa10.6□□□□□ -0.71
SIM1YIL123W ARP10Q04549 284 aa10.6□□□□□ -0.71
SIM1YIL123W YMR310CQ04867 317 aaPredicted RBP10.6□□□□□ -0.71
SIM1YIL123W MSH5Q12175 901 aa10.6□□□□□ -0.71
SIM1YIL123W NFI1Q12216 726 aa10.6□□□□□ -0.71
SIM1YIL123W PST2Q12335 198 aaKnown RBP10.6□□□□□ -0.71
SIM1YIL123W GAL7P08431 366 aa10.59□□□□□ -0.71
SIM1YIL123W RED1P14291 827 aa10.59□□□□□ -0.71
SIM1YIL123W CLB2P24869 491 aa10.59□□□□□ -0.71
SIM1YIL123W AGP1P25376 633 aa10.59□□□□□ -0.71
SIM1YIL123W RPN2P32565 945 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms