RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCI8	YIL071C	SIF2	P38262	535 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	SHE3	P38272	425 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	SEC31	P38968	1273 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	SEO1	P39709	593 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	FRT2	P39734	528 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	YEL028W	P39989	153 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	EDC3	P39998	551 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	RPS10B	P46784	105 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	GUF1	P46943	645 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	AIF1	P52923	378 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	CEG1	Q01159	459 aa	Predicted RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	YML131W	Q03102	365 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	PRP3	Q03338	469 aa	Predicted RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	YMR155W	Q03795	547 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	SWF1	Q04629	336 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	GRX8	Q05926	109 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	BLS1	Q06071	122 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	YOL019W	Q08157	551 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	BSC6	Q08280	497 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	AAD15	Q08361	143 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	RPS10A	Q08745	105 aa	Predicted RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	GPM2	Q12008	311 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	SPE3	Q12074	293 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	CAR1	P00812	333 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	APE1	P14904	514 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	LSB5	P25369	354 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	TFC1	P32367	649 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	AEP1	P32493	518 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	PEX5	P35056	612 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	YBR056W	P38081	501 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	KAP104	P38217	918 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	YHR182W	P38870	785 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	YHB1	P39676	399 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	YJR061W	P40355	935 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	ESL1	P40456	1118 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	HPM1	P40481	377 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	SEC28	P40509	296 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	DIM1	P41819	318 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	ATG27	P46989	271 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	ALT2	P52892	507 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	PRO2	P54885	456 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	ENT5	Q03769	411 aa	Known RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	INP2	Q03824	705 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	CSN9	Q03981	162 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	SPG3	Q04398	127 aa	Predicted RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	BCP1	Q06338	283 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	SWC7	Q06707	132 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	YEH2	Q07950	538 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	LDB17	Q12342	491 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	HRT3	Q12347	344 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	RRP36	Q12481	300 aa	Predicted RBP	3.19	□□□□□ -1.9
PCI8	YIL071C	YPL247C	Q12523	523 aa		3.19	□□□□□ -1.9
PCI8	YIL071C	ATP6	P00854	259 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	HAP2	P06774	265 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	URA4	P20051	364 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	CLN1	P20437	546 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	NDI1	P32340	513 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	PTC1	P35182	281 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	HMT1	P38074	348 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	PDX3	P38075	228 aa	Known RBP	3.18	□□□□□ -1.9
PCI8	YIL071C	YHR218W	P38899	603 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	ALD5	P40047	520 aa	Known RBP	3.18	□□□□□ -1.9
PCI8	YIL071C	SCS2	P40075	244 aa	Known RBP	3.18	□□□□□ -1.9
PCI8	YIL071C	COA1	P40452	197 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	FAF1	P40546	346 aa	Predicted RBP	3.18	□□□□□ -1.9
PCI8	YIL071C	IAH1	P41734	238 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	DLD2	P46681	530 aa	Known RBP	3.18	□□□□□ -1.9
PCI8	YIL071C	MRX6	P48564	524 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	STR3	P53101	465 aa	Known RBP	3.18	□□□□□ -1.9
PCI8	YIL071C	CUS2	P53830	285 aa	Predicted RBP	3.18	□□□□□ -1.9
PCI8	YIL071C	YNL181W	P53878	407 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	SLM2	P53955	656 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	SPO19	Q03029	223 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	PIR3	Q03180	325 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	TRS31	Q03337	283 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	GAS3	Q03655	524 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	YDR131C	Q03899	556 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	YKU80	Q04437	629 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	ESA1	Q08649	445 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	GET4	Q12125	312 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	PKH2	Q12236	1081 aa	Known RBP	3.18	□□□□□ -1.9
PCI8	YIL071C	DBP10	Q12389	995 aa	Known RBP	3.18	□□□□□ -1.9
PCI8	YIL071C	HSH49	Q99181	213 aa	Predicted RBP	3.18	□□□□□ -1.9
PCI8	YIL071C	AFI1	Q99222	893 aa		3.18	□□□□□ -1.9
PCI8	YIL071C	HIS1	P00498	297 aa	Known RBP	3.17	□□□□□ -1.9
PCI8	YIL071C	CBS2	P14905	389 aa		3.17	□□□□□ -1.9
PCI8	YIL071C	PDA1	P16387	420 aa	Known RBP	3.17	□□□□□ -1.9
PCI8	YIL071C	AAT2	P23542	418 aa	Known RBP	3.17	□□□□□ -1.9
PCI8	YIL071C	RER1	P25560	188 aa		3.17	□□□□□ -1.9
PCI8	YIL071C	RPL5	P26321	297 aa	Known RBP	3.17	□□□□□ -1.9
PCI8	YIL071C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
PCI8	YIL071C	BEM1	P29366	551 aa		3.17	□□□□□ -1.9
PCI8	YIL071C	ZIP1	P31111	875 aa		3.17	□□□□□ -1.9
PCI8	YIL071C	RPN2	P32565	945 aa	Known RBP	3.17	□□□□□ -1.9
PCI8	YIL071C	PAH1	P32567	862 aa		3.17	□□□□□ -1.9
PCI8	YIL071C	CSE1	P33307	960 aa		3.17	□□□□□ -1.9
PCI8	YIL071C	APM3	P38153	483 aa		3.17	□□□□□ -1.9
PCI8	YIL071C	MRP21	P38175	177 aa		3.17	□□□□□ -1.9
PCI8	YIL071C	ECM13	P38195	257 aa		3.17	□□□□□ -1.9
PCI8	YIL071C	SWD1	P39706	426 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms