RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	RPN2	P32565	945 aa	Known RBP	3.57	□□□□□ -1.84
YPT35	YHR105W	RAD24	P32641	659 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	ASK1	P35734	292 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	UIP5	P36137	443 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	RRN10	P38204	145 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	PCI8	P40512	444 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	YIR016W	P40572	265 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	MLC1	P53141	149 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	SCW4	P53334	386 aa	Known RBP	3.57	□□□□□ -1.84
YPT35	YHR105W	NCS2	P53923	493 aa	Predicted RBP	3.57	□□□□□ -1.84
YPT35	YHR105W	MPS1	P54199	764 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	MRS2	Q01926	470 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	DIG1	Q03063	452 aa	Known RBP	3.57	□□□□□ -1.84
YPT35	YHR105W	YDR387C	Q04162	555 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	MED2	Q12124	431 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	HSP42	Q12329	375 aa		3.57	□□□□□ -1.84
YPT35	YHR105W	LEU4	P06208	619 aa	Known RBP	3.56	□□□□□ -1.84
YPT35	YHR105W	IMA3	P0CW40	589 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	IMA4	P0CW41	589 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	PMR1	P13586	950 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	HNM1	P19807	563 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	SEC62	P21825	274 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	RPI1	P23250	407 aa	Known RBP	3.56	□□□□□ -1.84
YPT35	YHR105W	VPS17	P32913	551 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	STN1	P38960	494 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	CHS6	P40955	746 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	FYV8	P46949	817 aa	Known RBP	3.56	□□□□□ -1.84
YPT35	YHR105W	PCP1	P53259	346 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	PPM1	Q04081	328 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	YDR341C	Q05506	607 aa	Known RBP	3.56	□□□□□ -1.84
YPT35	YHR105W	DBP9	Q06218	594 aa	Known RBP	3.56	□□□□□ -1.84
YPT35	YHR105W	NDL1	Q06568	189 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	IMA2	Q08295	589 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	YDL009C	Q12210	107 aa		3.56	□□□□□ -1.84
YPT35	YHR105W	YML002W	P0CF17	737 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	ALG1	P16661	449 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	CTR86	P25355	563 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	YCR043C	P25361	127 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	SMY1	P32364	656 aa	Known RBP	3.55	□□□□□ -1.84
YPT35	YHR105W	RIM1	P32445	135 aa	Known RBP	3.55	□□□□□ -1.84
YPT35	YHR105W	APE2	P32454	952 aa	Known RBP	3.55	□□□□□ -1.84
YPT35	YHR105W	SIP2	P34164	415 aa	Known RBP	3.55	□□□□□ -1.84
YPT35	YHR105W	DAD2	P36162	133 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	MRPL4	P36517	319 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	YCR041W	P37265	110 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	MED8	P38304	223 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	YAL037W	P39728	267 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	YTA12	P40341	825 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	GCD10	P41814	478 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	YIP5	P53108	310 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	GIP3	Q03016	1276 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	PRP3	Q03338	469 aa	Predicted RBP	3.55	□□□□□ -1.84
YPT35	YHR105W	RPN9	Q04062	393 aa	Known RBP	3.55	□□□□□ -1.84
YPT35	YHR105W	DSE3	Q08729	430 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	UBX3	Q12229	455 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	SFG1	Q12507	346 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	CSR2	Q12734	1121 aa		3.55	□□□□□ -1.84
YPT35	YHR105W	RPO41	P13433	1351 aa	Known RBP	3.54	□□□□□ -1.84
YPT35	YHR105W	AUS1	Q08409	1394 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	MRS3	P10566	314 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	PHO84	P25297	587 aa	Known RBP	3.54	□□□□□ -1.84
YPT35	YHR105W	SMI1	P32566	505 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	YEL043W	P32618	956 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	REC114	P32841	428 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	CBP4	P37267	147 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	ARC40	P38328	384 aa	Known RBP	3.54	□□□□□ -1.84
YPT35	YHR105W	RTT107	P38850	1070 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	POP2	P39008	433 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	HAT2	P39984	401 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	YND1	P40009	630 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	ISC1	P40015	477 aa	Known RBP	3.54	□□□□□ -1.84
YPT35	YHR105W	GAT2	P40209	560 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	YPS6	P40583	537 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	ROG1	P53118	685 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	UTP6	Q02354	440 aa	Known RBP	3.54	□□□□□ -1.84
YPT35	YHR105W	YPL068C	Q02749	293 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	MRPL1	Q04599	285 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	MRPL51	Q06090	140 aa	Predicted RBP	3.54	□□□□□ -1.84
YPT35	YHR105W	REX3	Q12090	404 aa		3.54	□□□□□ -1.84
YPT35	YHR105W	CYB2	P00175	591 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	ITR1	P30605	584 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	ATS1	P31386	333 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	ATO2	P32907	282 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
YPT35	YHR105W	FRE2	P36033	711 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	WSS1	P38838	269 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	SPC97	P38863	823 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	DHH1	P39517	506 aa	Known RBP	3.53	□□□□□ -1.84
YPT35	YHR105W	GWT1	P47026	490 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	YIP1	P53039	248 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	DSL1	P53847	754 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	PDR16	P53860	351 aa	Known RBP	3.53	□□□□□ -1.84
YPT35	YHR105W	GPI15	P53961	229 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	RPM2	Q02773	1202 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	TAF12	Q03761	539 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	CSI1	Q04368	295 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	ORT1	Q12375	292 aa		3.53	□□□□□ -1.84
YPT35	YHR105W	TY1B-NL2	Q99337	1749 aa	Known RBP	3.53	□□□□□ -1.85
YPT35	YHR105W	HIS4	P00815	799 aa	Known RBP	3.52	□□□□□ -1.85
YPT35	YHR105W	SCH9	P11792	824 aa	Known RBP	3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms