RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	SIN4	P32259	974 aa		1.9	□□□□□ -2.11
DOT6	YER088C	MIX23	P38162	196 aa		1.9	□□□□□ -2.11
DOT6	YER088C	RPT4	P53549	437 aa	Known RBP	1.9	□□□□□ -2.11
DOT6	YER088C	CAF40	P53829	373 aa		1.9	□□□□□ -2.11
DOT6	YER088C	NCS2	P53923	493 aa	Predicted RBP	1.9	□□□□□ -2.11
DOT6	YER088C	PNG1	Q02890	363 aa		1.9	□□□□□ -2.11
DOT6	YER088C	HSP31	Q04432	237 aa		1.9	□□□□□ -2.11
DOT6	YER088C	RKM1	Q08961	583 aa	Predicted RBP	1.9	□□□□□ -2.11
DOT6	YER088C	INH1	P01097	85 aa		1.9	□□□□□ -2.11
DOT6	YER088C	RPL3	P14126	387 aa	Known RBP	1.9	□□□□□ -2.11
DOT6	YER088C	CPR1	P14832	162 aa	Known RBP	1.9	□□□□□ -2.11
DOT6	YER088C	UIP5	P36137	443 aa		1.9	□□□□□ -2.11
DOT6	YER088C	PIM1	P36775	1133 aa		1.9	□□□□□ -2.11
DOT6	YER088C	VAB2	P40003	282 aa		1.9	□□□□□ -2.11
DOT6	YER088C	RTR1	P40084	226 aa	Predicted RBP	1.9	□□□□□ -2.11
DOT6	YER088C	MKT1	P40850	830 aa	Known RBP	1.9	□□□□□ -2.11
DOT6	YER088C	SAS2	P40963	338 aa		1.9	□□□□□ -2.11
DOT6	YER088C	YIP1	P53039	248 aa		1.9	□□□□□ -2.11
DOT6	YER088C	YMR155W	Q03795	547 aa		1.9	□□□□□ -2.11
DOT6	YER088C	YDR131C	Q03899	556 aa		1.9	□□□□□ -2.11
DOT6	YER088C	SIL1	Q08199	421 aa		1.9	□□□□□ -2.11
DOT6	YER088C	THP3	Q12049	470 aa	Known RBP	1.9	□□□□□ -2.11
DOT6	YER088C	TEL1	P38110	2787 aa		1.89	□□□□□ -2.11
DOT6	YER088C	ECM25	P32525	599 aa		1.89	□□□□□ -2.11
DOT6	YER088C	YCR041W	P37265	110 aa		1.89	□□□□□ -2.11
DOT6	YER088C	MST28	P39552	234 aa		1.89	□□□□□ -2.11
DOT6	YER088C	YIL067C	P40514	678 aa		1.89	□□□□□ -2.11
DOT6	YER088C	GPD2	P41911	440 aa	Known RBP	1.89	□□□□□ -2.11
DOT6	YER088C	RMD9	P53140	646 aa	Known RBP	1.89	□□□□□ -2.11
DOT6	YER088C	POP6	P53218	158 aa		1.89	□□□□□ -2.11
DOT6	YER088C	PCP1	P53259	346 aa		1.89	□□□□□ -2.11
DOT6	YER088C	GIR2	Q03768	265 aa	Predicted RBP	1.89	□□□□□ -2.11
DOT6	YER088C	YDR387C	Q04162	555 aa		1.89	□□□□□ -2.11
DOT6	YER088C	TMS1	Q12116	473 aa		1.89	□□□□□ -2.11
DOT6	YER088C	CRM1	P30822	1084 aa	Known RBP	1.88	□□□□□ -2.11
DOT6	YER088C	MRP4	P32902	394 aa		1.88	□□□□□ -2.11
DOT6	YER088C	RSM22	P36056	628 aa		1.88	□□□□□ -2.11
DOT6	YER088C	YBR137W	P38276	179 aa		1.88	□□□□□ -2.11
DOT6	YER088C	HXT11	P54862	567 aa		1.88	□□□□□ -2.11
DOT6	YER088C	MRP51	Q02950	344 aa		1.88	□□□□□ -2.11
DOT6	YER088C	IRC4	Q03036	179 aa		1.88	□□□□□ -2.11
DOT6	YER088C	YOR387C	Q08910	206 aa		1.88	□□□□□ -2.11
DOT6	YER088C	YPR022C	Q12139	1133 aa		1.88	□□□□□ -2.11
DOT6	YER088C	RMD5	Q12508	421 aa		1.88	□□□□□ -2.11
DOT6	YER088C	RRP12	Q12754	1228 aa	Known RBP	1.88	□□□□□ -2.11
DOT6	YER088C	MOT1	P32333	1867 aa		1.88	□□□□□ -2.11
DOT6	YER088C	ILV5	P06168	395 aa	Known RBP	1.88	□□□□□ -2.11
DOT6	YER088C	YAR066W	P0CX18	203 aa		1.88	□□□□□ -2.11
DOT6	YER088C	YHR214W	P0CX19	203 aa		1.88	□□□□□ -2.11
DOT6	YER088C	SPT15	P13393	240 aa	Known RBP	1.88	□□□□□ -2.11
DOT6	YER088C	CLB3	P24870	427 aa		1.88	□□□□□ -2.11
DOT6	YER088C	CTR86	P25355	563 aa		1.88	□□□□□ -2.11
DOT6	YER088C	TIP1	P27654	210 aa	Predicted RBP	1.88	□□□□□ -2.11
DOT6	YER088C	NAM9	P27929	486 aa		1.88	□□□□□ -2.11
DOT6	YER088C	HCS1	P34243	683 aa		1.88	□□□□□ -2.11
DOT6	YER088C	CBP4	P37267	147 aa		1.88	□□□□□ -2.11
DOT6	YER088C	SDS24	P38314	527 aa		1.88	□□□□□ -2.11
DOT6	YER088C	YBP1	P38315	674 aa		1.88	□□□□□ -2.11
DOT6	YER088C	VHC1	P38329	1120 aa		1.88	□□□□□ -2.11
DOT6	YER088C	FAA2	P39518	744 aa		1.88	□□□□□ -2.11
DOT6	YER088C	REE1	P40893	198 aa		1.88	□□□□□ -2.11
DOT6	YER088C	YJR011C	P47086	261 aa	Predicted RBP	1.88	□□□□□ -2.11
DOT6	YER088C	COS5	P47187	383 aa		1.88	□□□□□ -2.11
DOT6	YER088C	BNI5	P53890	448 aa	Known RBP	1.88	□□□□□ -2.11
DOT6	YER088C	IBD2	P53892	351 aa		1.88	□□□□□ -2.11
DOT6	YER088C	ELP3	Q02908	557 aa	Known RBP	1.88	□□□□□ -2.11
DOT6	YER088C	COS7	Q07788	383 aa		1.88	□□□□□ -2.11
DOT6	YER088C	RAD61	Q99359	647 aa		1.88	□□□□□ -2.11
DOT6	YER088C	SWI1	P09547	1314 aa		1.87	□□□□□ -2.11
DOT6	YER088C	FKS1	P38631	1876 aa	Known RBP	1.87	□□□□□ -2.11
DOT6	YER088C	SAM1	P10659	382 aa	Known RBP	1.87	□□□□□ -2.11
DOT6	YER088C	CLC1	P17891	233 aa		1.87	□□□□□ -2.11
DOT6	YER088C	SAM2	P19358	384 aa	Known RBP	1.87	□□□□□ -2.11
DOT6	YER088C	RPC53	P25441	422 aa		1.87	□□□□□ -2.11
DOT6	YER088C	NIP1	P32497	812 aa	Known RBP	1.87	□□□□□ -2.11
DOT6	YER088C	YME2	P32843	850 aa		1.87	□□□□□ -2.11
DOT6	YER088C	BYE1	P36106	594 aa		1.87	□□□□□ -2.11
DOT6	YER088C	NAT2	P37293	288 aa		1.87	□□□□□ -2.11
DOT6	YER088C	OST1	P41543	476 aa	Known RBP	1.87	□□□□□ -2.11
DOT6	YER088C	YFH7	P43591	353 aa		1.87	□□□□□ -2.11
DOT6	YER088C	MNP1	P53163	194 aa	Predicted RBP	1.87	□□□□□ -2.11
DOT6	YER088C	YNR048W	P53740	393 aa		1.87	□□□□□ -2.11
DOT6	YER088C	MRPL35	Q06678	367 aa		1.87	□□□□□ -2.11
DOT6	YER088C	ESA1	Q08649	445 aa		1.87	□□□□□ -2.11
DOT6	YER088C	SFI1	Q12369	946 aa		1.87	□□□□□ -2.11
DOT6	YER088C	ORT1	Q12375	292 aa		1.87	□□□□□ -2.11
DOT6	YER088C	MYO1	P08964	1928 aa		1.86	□□□□□ -2.11
DOT6	YER088C	SUP35	P05453	685 aa	Known RBP	1.86	□□□□□ -2.11
DOT6	YER088C	CPR4	P25334	318 aa		1.86	□□□□□ -2.11
DOT6	YER088C	ADK2	P26364	225 aa		1.86	□□□□□ -2.11
DOT6	YER088C	URA7	P28274	579 aa	Known RBP	1.86	□□□□□ -2.11
DOT6	YER088C	HIR2	P32480	875 aa		1.86	□□□□□ -2.11
DOT6	YER088C	ECM27	P47144	725 aa		1.86	□□□□□ -2.11
DOT6	YER088C	FMS1	P50264	508 aa		1.86	□□□□□ -2.11
DOT6	YER088C	YGL242C	P53066	181 aa		1.86	□□□□□ -2.11
DOT6	YER088C	FRE4	P53746	719 aa		1.86	□□□□□ -2.11
DOT6	YER088C	GOR1	P53839	350 aa		1.86	□□□□□ -2.11
DOT6	YER088C	DSL1	P53847	754 aa		1.86	□□□□□ -2.11
DOT6	YER088C	ROY1	Q04847	553 aa		1.86	□□□□□ -2.11
DOT6	YER088C	YLR345W	Q06137	509 aa		1.86	□□□□□ -2.11

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms