RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W FAR7P43592 221 aa2.39□□□□□ -2.03
SNX41YDR425W IRC6P43615 237 aa2.39□□□□□ -2.03
SNX41YDR425W ARC1P46672 376 aaKnown RBP2.39□□□□□ -2.03
SNX41YDR425W YJL055WP47044 245 aa2.39□□□□□ -2.03
SNX41YDR425W YJR054WP47114 497 aa2.39□□□□□ -2.03
SNX41YDR425W HAM1P47119 197 aaKnown RBP2.39□□□□□ -2.03
SNX41YDR425W RMR1P53060 241 aa2.39□□□□□ -2.03
SNX41YDR425W YGL108CP53139 140 aa2.39□□□□□ -2.03
SNX41YDR425W IMP4P53941 290 aaKnown RBP2.39□□□□□ -2.03
SNX41YDR425W SED5Q01590 340 aa2.39□□□□□ -2.03
SNX41YDR425W SKI8Q02793 397 aaPredicted RBP2.39□□□□□ -2.03
SNX41YDR425W SRL4Q03085 281 aa2.39□□□□□ -2.03
SNX41YDR425W RCF1Q03713 159 aa2.39□□□□□ -2.03
SNX41YDR425W YMR027WQ04371 470 aa2.39□□□□□ -2.03
SNX41YDR425W FUS2Q05670 677 aa2.39□□□□□ -2.03
SNX41YDR425W ASA1Q06822 443 aa2.39□□□□□ -2.03
SNX41YDR425W YLR053CQ12026 108 aa2.39□□□□□ -2.03
SNX41YDR425W ADF1Q2V2Q1 113 aa2.39□□□□□ -2.03
SNX41YDR425W PDE2P06776 526 aa2.38□□□□□ -2.03
SNX41YDR425W SAN1P22470 610 aa2.38□□□□□ -2.03
SNX41YDR425W ADH7P25377 361 aa2.38□□□□□ -2.03
SNX41YDR425W TPS2P31688 896 aaKnown RBP2.38□□□□□ -2.03
SNX41YDR425W HCS1P34243 683 aa2.38□□□□□ -2.03
SNX41YDR425W PEX5P35056 612 aa2.38□□□□□ -2.03
SNX41YDR425W ANS1P38832 159 aa2.38□□□□□ -2.03
SNX41YDR425W YDR089WP38966 869 aa2.38□□□□□ -2.03
SNX41YDR425W BUR6P40096 142 aa2.38□□□□□ -2.03
SNX41YDR425W YJR061WP40355 935 aa2.38□□□□□ -2.03
SNX41YDR425W LIA1P47120 325 aaKnown RBP2.38□□□□□ -2.03
SNX41YDR425W ERG26P53199 349 aaKnown RBP2.38□□□□□ -2.03
SNX41YDR425W GIS2P53849 153 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SNX41YDR425W RPL22BP56628 122 aaKnown RBP2.38□□□□□ -2.03
SNX41YDR425W YML131WQ03102 365 aa2.38□□□□□ -2.03
SNX41YDR425W MSS11Q03825 758 aa2.38□□□□□ -2.03
SNX41YDR425W YET2Q04210 160 aa2.38□□□□□ -2.03
SNX41YDR425W EMI2Q04409 500 aaKnown RBP2.38□□□□□ -2.03
SNX41YDR425W MYO5Q04439 1219 aaKnown RBP2.38□□□□□ -2.03
SNX41YDR425W INM2Q05533 292 aa2.38□□□□□ -2.03
SNX41YDR425W COQ9Q05779 260 aa2.38□□□□□ -2.03
SNX41YDR425W THI20Q08224 551 aa2.38□□□□□ -2.03
SNX41YDR425W SNX3Q08826 162 aaKnown RBP2.38□□□□□ -2.03
SNX41YDR425W RDR1Q08904 546 aa2.38□□□□□ -2.03
SNX41YDR425W LEU9Q12166 604 aaKnown RBP2.38□□□□□ -2.03
SNX41YDR425W EMP46Q12396 444 aa2.38□□□□□ -2.03
SNX41YDR425W RRD2Q12461 358 aa2.38□□□□□ -2.03
SNX41YDR425W MF(ALPHA)1P01149 165 aa2.37□□□□□ -2.03
SNX41YDR425W ARG81P05085 880 aa2.37□□□□□ -2.03
SNX41YDR425W RPS2P25443 254 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W MGT1P26188 188 aa2.37□□□□□ -2.03
SNX41YDR425W CMK1P27466 446 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W PRO3P32263 286 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W KDX1P36005 433 aa2.37□□□□□ -2.03
SNX41YDR425W YBR139WP38109 508 aa2.37□□□□□ -2.03
SNX41YDR425W MRX3P38172 270 aa2.37□□□□□ -2.03
SNX41YDR425W KAP104P38217 918 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W YBR285WP38354 144 aa2.37□□□□□ -2.03
SNX41YDR425W LAG1P38703 411 aa2.37□□□□□ -2.03
SNX41YDR425W DBP8P38719 431 aa2.37□□□□□ -2.03
SNX41YDR425W SMF2P38778 549 aa2.37□□□□□ -2.03
SNX41YDR425W NAB3P38996 802 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SNX41YDR425W SEO1P39709 593 aa2.37□□□□□ -2.03
SNX41YDR425W FRT2P39734 528 aa2.37□□□□□ -2.03
SNX41YDR425W YMR134WP40207 237 aa2.37□□□□□ -2.03
SNX41YDR425W MDE1P47095 244 aa2.37□□□□□ -2.03
SNX41YDR425W EMC2P47133 292 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W TRF5P48561 642 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W DIA3P52290 468 aa2.37□□□□□ -2.03
SNX41YDR425W NBP1P52919 319 aaPredicted RBP2.37□□□□□ -2.03
SNX41YDR425W RET3P53600 189 aa2.37□□□□□ -2.03
SNX41YDR425W BIO4P53630 237 aa2.37□□□□□ -2.03
SNX41YDR425W CBK1P53894 756 aa2.37□□□□□ -2.03
SNX41YDR425W YVH1Q02256 364 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W ABZ2Q03266 374 aa2.37□□□□□ -2.03
SNX41YDR425W BUD22Q04347 519 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W YLR297WQ05899 129 aa2.37□□□□□ -2.03
SNX41YDR425W DCS1Q06151 350 aa2.37□□□□□ -2.03
SNX41YDR425W ATG29Q12092 213 aa2.37□□□□□ -2.03
SNX41YDR425W NOT5Q12514 560 aaPredicted RBP2.37□□□□□ -2.03
SNX41YDR425W YLR278CQ05854 1341 aa2.37□□□□□ -2.03
SNX41YDR425W RPL6BP05739 176 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W FUM1P08417 488 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W SNF4P12904 322 aa2.37□□□□□ -2.03
SNX41YDR425W PDA1P16387 420 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W BUD5P25300 642 aaPredicted RBP2.37□□□□□ -2.03
SNX41YDR425W ZIP1P31111 875 aa2.37□□□□□ -2.03
SNX41YDR425W SYN8P31377 255 aa2.37□□□□□ -2.03
SNX41YDR425W TFC1P32367 649 aa2.37□□□□□ -2.03
SNX41YDR425W HIR2P32480 875 aa2.37□□□□□ -2.03
SNX41YDR425W MUD1P32605 298 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W MTR2P34232 184 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W ETR1P38071 380 aa2.37□□□□□ -2.03
SNX41YDR425W DUG2P38149 878 aa2.37□□□□□ -2.03
SNX41YDR425W POP4P38336 279 aa2.37□□□□□ -2.03
SNX41YDR425W RPH1P39956 796 aa2.37□□□□□ -2.03
SNX41YDR425W YJL068CP40363 299 aa2.37□□□□□ -2.03
SNX41YDR425W ALB1P47019 175 aaPredicted RBP2.37□□□□□ -2.03
SNX41YDR425W RPS7BP48164 190 aaKnown RBP2.37□□□□□ -2.03
SNX41YDR425W TDA7P53882 636 aaPredicted RBP2.37□□□□□ -2.03
SNX41YDR425W EFM6P53970 246 aa2.37□□□□□ -2.03
SNX41YDR425W PRO2P54885 456 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms