RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	JLP1	Q12358	412 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	SUS1	Q6WNK7	96 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	DED1	P06634	604 aa	Known RBP	4.8	□□□□□ -1.64
PAL1	YDR348C	SAC7	P17121	654 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
PAL1	YDR348C	GRR1	P24814	1151 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	SAT4	P25333	603 aa	Known RBP	4.8	□□□□□ -1.64
PAL1	YDR348C	PGS1	P25578	521 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	SNC1	P31109	117 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	PTM1	P32857	523 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	CAF4	P36130	643 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	BAP2	P38084	609 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	IMD2	P38697	523 aa	Known RBP	4.8	□□□□□ -1.64
PAL1	YDR348C	STB5	P38699	743 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	GEP4	P38812	185 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
PAL1	YDR348C	LYS9	P38999	446 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	MBP1	P39678	833 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	YEL025C	P39991	1188 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	GTT1	P40582	234 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	TIM54	P47045	478 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	MTR3	P48240	250 aa	Predicted RBP	4.8	□□□□□ -1.64
PAL1	YDR348C	PRM8	P53174	237 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	CUL3	P53202	744 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	POP6	P53218	158 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	YNL181W	P53878	407 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	INN1	P53901	409 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	LSM7	P53905	115 aa	Known RBP	4.8	□□□□□ -1.64
PAL1	YDR348C	YMD8	Q03697	442 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	YML037C	Q03703	340 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	AIM36	Q03798	255 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	TIF35	Q04067	274 aa	Known RBP	4.8	□□□□□ -1.64
PAL1	YDR348C	RRN11	Q04712	507 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	YHC1	Q05900	231 aa	Known RBP	4.8	□□□□□ -1.64
PAL1	YDR348C	RIF2	Q06208	395 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	RAD34	Q06665	692 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	ASR1	Q06834	288 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	ACK1	Q07622	623 aa	Predicted RBP	4.8	□□□□□ -1.64
PAL1	YDR348C	UAF30	Q08747	228 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
PAL1	YDR348C	ALG6	Q12001	544 aa	Known RBP	4.8	□□□□□ -1.64
PAL1	YDR348C	MLH3	Q12083	715 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	NBP2	Q12163	236 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	SVS1	Q12254	260 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	YRM1	Q12340	786 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	RTN2	Q12443	393 aa		4.8	□□□□□ -1.64
PAL1	YDR348C	RPS9A	O13516	197 aa	Known RBP	4.79	□□□□□ -1.64
PAL1	YDR348C	GCN4	P03069	281 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	AAC1	P04710	309 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	SPS2	P08459	502 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	RPS4A	P0CX35	261 aa	Known RBP	4.79	□□□□□ -1.64
PAL1	YDR348C	RPS4B	P0CX36	261 aa	Known RBP	4.79	□□□□□ -1.64
PAL1	YDR348C	ASP3-2	P0CX77	362 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	ASP3-3	P0CX78	362 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	ASP3-4	P0CX79	362 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	ASP3-1	P0CZ17	362 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	RPL4A	P10664	362 aa	Known RBP	4.79	□□□□□ -1.64
PAL1	YDR348C	IDP1	P21954	428 aa	Known RBP	4.79	□□□□□ -1.64
PAL1	YDR348C	TRX2	P22803	104 aa	Known RBP	4.79	□□□□□ -1.64
PAL1	YDR348C	HCM1	P25364	564 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	TAH1	P25638	111 aa	Predicted RBP	4.79	□□□□□ -1.64
PAL1	YDR348C	COX13	P32799	129 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	VPS17	P32913	551 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	MSN2	P33748	704 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	RSM22	P36056	628 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	UIP5	P36137	443 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	YMC2	P38087	329 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	CDS1	P38221	457 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	BIT2	P38346	545 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	SBE22	P38814	852 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	ATM1	P40416	690 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	GCV1	P48015	400 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	RPL4B	P49626	362 aa	Known RBP	4.79	□□□□□ -1.64
PAL1	YDR348C	IBD2	P53892	351 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	STP1	Q00947	519 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	TIM44	Q01852	431 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	RNH1	Q04740	348 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	BUR2	Q05949	395 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	YDL121C	Q07541	149 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	AVO1	Q08236	1176 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	OSW2	Q12202	724 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	TY1A-NL1	Q12391	440 aa	Known RBP	4.79	□□□□□ -1.64
PAL1	YDR348C	MDM12	Q92328	271 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	MTR10	Q99189	972 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	UBR1	P19812	1950 aa		4.79	□□□□□ -1.64
PAL1	YDR348C	CYC1	P00044	109 aa	Predicted RBP	4.78	□□□□□ -1.64
PAL1	YDR348C	PET54	P10834	293 aa		4.78	□□□□□ -1.64
PAL1	YDR348C	LAT1	P12695	482 aa	Known RBP	4.78	□□□□□ -1.64
PAL1	YDR348C	FUS3	P16892	353 aa	Known RBP	4.78	□□□□□ -1.64
PAL1	YDR348C	PRP28	P23394	588 aa		4.78	□□□□□ -1.64
PAL1	YDR348C	VBA3	P25594	458 aa		4.78	□□□□□ -1.64
PAL1	YDR348C	BEM1	P29366	551 aa		4.78	□□□□□ -1.64
PAL1	YDR348C	COQ2	P32378	372 aa		4.78	□□□□□ -1.64
PAL1	YDR348C	VAM7	P32912	316 aa		4.78	□□□□□ -1.64
PAL1	YDR348C	PDR3	P33200	976 aa		4.78	□□□□□ -1.64
PAL1	YDR348C	DHR2	P36009	735 aa	Predicted RBP	4.78	□□□□□ -1.64
PAL1	YDR348C	VBA5	P36172	582 aa		4.78	□□□□□ -1.64
PAL1	YDR348C	VID24	P38263	362 aa		4.78	□□□□□ -1.64
PAL1	YDR348C	YHR033W	P38690	423 aa		4.78	□□□□□ -1.64
PAL1	YDR348C	SKN7	P38889	622 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms