RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W KAP114P53067 1004 aa1.3□□□□□ -2.2
MSN5YDR335W DBP6P53734 629 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W GCN5Q03330 439 aa1.3□□□□□ -2.2
MSN5YDR335W RRP17Q04031 235 aaPredicted RBP1.3□□□□□ -2.2
MSN5YDR335W COX20Q04935 205 aa1.3□□□□□ -2.2
MSN5YDR335W CMS1Q07897 291 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W GSH2Q08220 491 aa1.3□□□□□ -2.2
MSN5YDR335W MES1P00958 751 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W MET3P08536 511 aa1.29□□□□□ -2.2
MSN5YDR335W APA2P22108 325 aa1.29□□□□□ -2.2
MSN5YDR335W RDS1P25611 832 aa1.29□□□□□ -2.2
MSN5YDR335W YUR1P26725 428 aa1.29□□□□□ -2.2
MSN5YDR335W BUD14P27637 709 aa1.29□□□□□ -2.2
MSN5YDR335W FAA1P30624 700 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W HSP104P31539 908 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W PEX2P32800 271 aa1.29□□□□□ -2.2
MSN5YDR335W BUD2P33314 1104 aa1.29□□□□□ -2.2
MSN5YDR335W RPF2P36160 344 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W CCT6P39079 546 aa1.29□□□□□ -2.2
MSN5YDR335W FMP52P40008 231 aa1.29□□□□□ -2.2
MSN5YDR335W TAX4P47030 604 aa1.29□□□□□ -2.2
MSN5YDR335W SMC3P47037 1230 aa1.29□□□□□ -2.2
MSN5YDR335W RMR1P53060 241 aa1.29□□□□□ -2.2
MSN5YDR335W YIP4P53093 235 aa1.29□□□□□ -2.2
MSN5YDR335W ZPR1P53303 486 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W DIP5P53388 608 aa1.29□□□□□ -2.2
MSN5YDR335W KTR5P53966 522 aaPredicted RBP1.29□□□□□ -2.2
MSN5YDR335W YMR102CQ03177 834 aa1.29□□□□□ -2.2
MSN5YDR335W MDM30Q05930 598 aa1.29□□□□□ -2.2
MSN5YDR335W YLR224WQ05947 369 aa1.29□□□□□ -2.2
MSN5YDR335W RDR1Q08904 546 aa1.29□□□□□ -2.2
MSN5YDR335W LEA1Q08963 238 aaPredicted RBP1.29□□□□□ -2.2
MSN5YDR335W SRO7Q12038 1033 aa1.29□□□□□ -2.2
MSN5YDR335W ULA1Q12059 462 aa1.29□□□□□ -2.2
MSN5YDR335W YDL007C-AQ2V2Q0 85 aa1.29□□□□□ -2.2
MSN5YDR335W RGS2Q99188 309 aa1.29□□□□□ -2.2
MSN5YDR335W STH1P32597 1359 aa1.29□□□□□ -2.2
MSN5YDR335W TUB3P09734 445 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W RPL27AP0C2H6 136 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W RPL27BP0C2H7 136 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W MBR1P23493 339 aa1.29□□□□□ -2.2
MSN5YDR335W RVS161P25343 265 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W YCR061WP25639 631 aa1.29□□□□□ -2.2
MSN5YDR335W YSC83P32792 385 aa1.29□□□□□ -2.2
MSN5YDR335W RPT5P33297 434 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W NTR2P36118 322 aaPredicted RBP1.29□□□□□ -2.2
MSN5YDR335W LDB7P38210 180 aa1.29□□□□□ -2.2
MSN5YDR335W MIC12P38341 106 aa1.29□□□□□ -2.2
MSN5YDR335W BZZ1P38822 633 aa1.29□□□□□ -2.2
MSN5YDR335W SCC4P40090 624 aa1.29□□□□□ -2.2
MSN5YDR335W MND2P40577 368 aa1.29□□□□□ -2.2
MSN5YDR335W SWP82P43554 623 aa1.29□□□□□ -2.2
MSN5YDR335W DPB11P47027 764 aaPredicted RBP1.29□□□□□ -2.2
MSN5YDR335W COS5P47187 383 aa1.29□□□□□ -2.2
MSN5YDR335W EFM5P53200 248 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W RTT102P53330 157 aa1.29□□□□□ -2.2
MSN5YDR335W ATG4P53867 494 aa1.29□□□□□ -2.2
MSN5YDR335W PGA2P53903 129 aa1.29□□□□□ -2.2
MSN5YDR335W SLT2Q00772 484 aa1.29□□□□□ -2.2
MSN5YDR335W VPS20Q04272 221 aa1.29□□□□□ -2.2
MSN5YDR335W PIG1Q06216 648 aa1.29□□□□□ -2.2
MSN5YDR335W GGA1Q06336 557 aa1.29□□□□□ -2.2
MSN5YDR335W PBP4Q07362 185 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W COS7Q07788 383 aa1.29□□□□□ -2.2
MSN5YDR335W THP1Q08231 455 aa1.29□□□□□ -2.2
MSN5YDR335W REX4Q08237 289 aa1.29□□□□□ -2.2
MSN5YDR335W YOL159CQ08300 171 aa1.29□□□□□ -2.2
MSN5YDR335W IRC13Q08630 104 aa1.29□□□□□ -2.2
MSN5YDR335W POM33Q12164 279 aa1.29□□□□□ -2.2
MSN5YDR335W INP53Q12271 1107 aa1.29□□□□□ -2.2
MSN5YDR335W RRD2Q12461 358 aa1.29□□□□□ -2.2
MSN5YDR335W AAC1P04710 309 aa1.29□□□□□ -2.2
MSN5YDR335W COQ1P18900 473 aa1.29□□□□□ -2.2
MSN5YDR335W CMK2P22517 447 aa1.29□□□□□ -2.2
MSN5YDR335W LRE1P25579 583 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W CWP1P28319 239 aa1.29□□□□□ -2.2
MSN5YDR335W APE2P32454 952 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W GDH2P33327 1092 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W YBR056WP38081 501 aa1.29□□□□□ -2.2
MSN5YDR335W RFC3P38629 340 aa1.29□□□□□ -2.2
MSN5YDR335W FMO1P38866 432 aa1.29□□□□□ -2.2
MSN5YDR335W CIN4P39110 191 aa1.29□□□□□ -2.2
MSN5YDR335W YEL020CP39994 560 aa1.29□□□□□ -2.2
MSN5YDR335W SNG1P46950 547 aa1.29□□□□□ -2.2
MSN5YDR335W GCD14P46959 383 aaPredicted RBP1.29□□□□□ -2.2
MSN5YDR335W URB2P47108 1174 aa1.29□□□□□ -2.2
MSN5YDR335W NPA3P47122 385 aa1.29□□□□□ -2.2
MSN5YDR335W COG2P53271 262 aa1.29□□□□□ -2.2
MSN5YDR335W SMM1P53720 384 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W BUD17P53727 317 aa1.29□□□□□ -2.2
MSN5YDR335W ZRG17P53735 605 aa1.29□□□□□ -2.2
MSN5YDR335W YNL181WP53878 407 aa1.29□□□□□ -2.2
MSN5YDR335W BOP3P53958 396 aa1.29□□□□□ -2.2
MSN5YDR335W AIM33Q04516 312 aa1.29□□□□□ -2.2
MSN5YDR335W IZH3Q07959 543 aa1.29□□□□□ -2.2
MSN5YDR335W NPC2Q12408 173 aa1.29□□□□□ -2.2
MSN5YDR335W AHA1Q12449 350 aaKnown RBP1.29□□□□□ -2.2
MSN5YDR335W TAD3Q9URQ3 322 aa1.29□□□□□ -2.2
MSN5YDR335W YPT1P01123 206 aaKnown RBP1.28□□□□□ -2.2
MSN5YDR335W HEM1P09950 548 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms