RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	YLR462W	O13556	202 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	KGD1	P20967	1014 aa	Known RBP	4.38	□□□□□ -1.71
RPC53	YDL150W	SEC1	P30619	724 aa	Known RBP	4.38	□□□□□ -1.71
RPC53	YDL150W	MRP4	P32902	394 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	SRB2	P34162	210 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	YPK3	P38070	525 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	YBR056W	P38081	501 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	SRO77	P38163	1010 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	YHL049C	P38722	271 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	YND1	P40009	630 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	LCP5	P40079	357 aa	Predicted RBP	4.38	□□□□□ -1.71
RPC53	YDL150W	YER189W	P40104	122 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	HXT9	P40885	567 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	YFL064C	P43540	174 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	SNZ3	P43545	298 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	RPC17	P47076	161 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	PYK2	P52489	506 aa	Known RBP	4.38	□□□□□ -1.71
RPC53	YDL150W	SNZ2	P53824	298 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	SLG1	P54867	378 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	RSM23	Q01163	450 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	ADA2	Q02336	434 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	ERV41	Q04651	352 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	YMR317W	Q04893	1140 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	IVY1	Q04934	453 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	YDR278C	Q05612	105 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	YDL218W	Q07629	317 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	DIS3	Q08162	1001 aa	Known RBP	4.38	□□□□□ -1.71
RPC53	YDL150W	DDC1	Q08949	612 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	SFI1	Q12369	946 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	YBL111C	Q3E7Y5	667 aa		4.38	□□□□□ -1.71
RPC53	YDL150W	ARG3	P05150	338 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	PUT4	P15380	627 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	EST1	P17214	699 aa	Predicted RBP	4.37	□□□□□ -1.71
RPC53	YDL150W	ART10	P18634	518 aa	Known RBP	4.37	□□□□□ -1.71
RPC53	YDL150W	YEL043W	P32618	956 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	TCD2	P36101	447 aa	Known RBP	4.37	□□□□□ -1.71
RPC53	YDL150W	BYE1	P36106	594 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	DUG2	P38149	878 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	MED6	P38782	295 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	AVT2	P39981	480 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	YIL060W	P40519	144 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	MET28	P40573	187 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	ROK1	P45818	564 aa	Predicted RBP	4.37	□□□□□ -1.71
RPC53	YDL150W	RPS10B	P46784	105 aa	Known RBP	4.37	□□□□□ -1.71
RPC53	YDL150W	GUF1	P46943	645 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	IMP4	P53941	290 aa	Known RBP	4.37	□□□□□ -1.71
RPC53	YDL150W	ELP3	Q02908	557 aa	Known RBP	4.37	□□□□□ -1.71
RPC53	YDL150W	IZH1	Q03419	316 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	YMR160W	Q03823	816 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	SPC19	Q03954	165 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	SXM1	Q04175	944 aa	Known RBP	4.37	□□□□□ -1.71
RPC53	YDL150W	URH1	Q04179	340 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	RRB1	Q04225	511 aa	Known RBP	4.37	□□□□□ -1.71
RPC53	YDL150W	THI20	Q08224	551 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	RPS10A	Q08745	105 aa	Predicted RBP	4.37	□□□□□ -1.71
RPC53	YDL150W	RDR1	Q08904	546 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	SCM3	Q12334	223 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	IRA1	P18963	3092 aa		4.37	□□□□□ -1.71
RPC53	YDL150W	BEM2	P39960	2167 aa	Known RBP	4.36	□□□□□ -1.71
RPC53	YDL150W	PMS1	P14242	873 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	CKA1	P15790	372 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	PDA1	P16387	420 aa	Known RBP	4.36	□□□□□ -1.71
RPC53	YDL150W	TRX1	P22217	103 aa	Known RBP	4.36	□□□□□ -1.71
RPC53	YDL150W	GID7	P25569	745 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	SNC1	P31109	117 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	TIF3	P34167	436 aa	Known RBP	4.36	□□□□□ -1.71
RPC53	YDL150W	RPL32	P38061	130 aa	Known RBP	4.36	□□□□□ -1.71
RPC53	YDL150W	SIF2	P38262	535 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	SWC5	P38326	303 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	YIL054W	P40524	105 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	IMD4	P50094	524 aa	Known RBP	4.36	□□□□□ -1.71
RPC53	YDL150W	YML6	P51998	286 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	YGL260W	P53056	76 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	HOS2	P53096	452 aa	Predicted RBP	4.36	□□□□□ -1.71
RPC53	YDL150W	MAL13	P53338	473 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	TAF11	Q04226	346 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	TAF9	Q05027	157 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	RSF1	Q05043	376 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	APC5	Q08683	685 aa		4.36	□□□□□ -1.71
RPC53	YDL150W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
RPC53	YDL150W	CDC23	P16522	626 aa		4.35	□□□□□ -1.71
RPC53	YDL150W	NPL6	P32832	435 aa		4.35	□□□□□ -1.71
RPC53	YDL150W	MUM2	P38236	366 aa		4.35	□□□□□ -1.71
RPC53	YDL150W	PCA1	P38360	1216 aa		4.35	□□□□□ -1.71
RPC53	YDL150W	TIF5	P38431	405 aa	Known RBP	4.35	□□□□□ -1.71
RPC53	YDL150W	LAG1	P38703	411 aa		4.35	□□□□□ -1.71
RPC53	YDL150W	YPT35	P38815	214 aa	Known RBP	4.35	□□□□□ -1.71
RPC53	YDL150W	END3	P39013	349 aa		4.35	□□□□□ -1.71
RPC53	YDL150W	YGR126W	P53274	230 aa		4.35	□□□□□ -1.71
RPC53	YDL150W	YNL247W	P53852	767 aa	Known RBP	4.35	□□□□□ -1.71
RPC53	YDL150W	IPI3	P53877	555 aa		4.35	□□□□□ -1.71
RPC53	YDL150W	YNL040W	P53960	456 aa	Predicted RBP	4.35	□□□□□ -1.71
RPC53	YDL150W	HER2	Q03557	464 aa		4.35	□□□□□ -1.71
RPC53	YDL150W	VTI1	Q04338	217 aa		4.35	□□□□□ -1.71
RPC53	YDL150W	MRP13	P12686	339 aa		4.34	□□□□□ -1.71
RPC53	YDL150W	RPO26	P20435	155 aa		4.34	□□□□□ -1.71
RPC53	YDL150W	GPI10	P30777	616 aa		4.34	□□□□□ -1.71
RPC53	YDL150W	MRE11	P32829	692 aa		4.34	□□□□□ -1.71
RPC53	YDL150W	PDR3	P33200	976 aa		4.34	□□□□□ -1.71
RPC53	YDL150W	CSE1	P33307	960 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms