RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W MTF1P14908 341 aaKnown RBP7.57□□□□□ -1.2
ABP1YCR088W APA1P16550 321 aaKnown RBP7.57□□□□□ -1.2
ABP1YCR088W IDP1P21954 428 aaKnown RBP7.57□□□□□ -1.2
ABP1YCR088W PPH22P23595 377 aa7.57□□□□□ -1.2
ABP1YCR088W PEX1P24004 1043 aa7.57□□□□□ -1.2
ABP1YCR088W SPO23P33757 523 aa7.57□□□□□ -1.2
ABP1YCR088W POA1P38218 177 aa7.57□□□□□ -1.2
ABP1YCR088W DBP8P38719 431 aa7.57□□□□□ -1.2
ABP1YCR088W MBP1P39678 833 aa7.57□□□□□ -1.2
ABP1YCR088W RPH1P39956 796 aa7.57□□□□□ -1.2
ABP1YCR088W NNF1P47149 201 aa7.57□□□□□ -1.2
ABP1YCR088W MPC1P53157 130 aaKnown RBP7.57□□□□□ -1.2
ABP1YCR088W RQC1Q05468 723 aaKnown RBP7.57□□□□□ -1.2
ABP1YCR088W PER33Q12144 273 aa7.57□□□□□ -1.2
ABP1YCR088W YBL113CQ7M4S9 792 aa7.57□□□□□ -1.2
ABP1YCR088W ADE5,7P07244 802 aaKnown RBP7.56□□□□□ -1.2
ABP1YCR088W SWI5P08153 709 aa7.56□□□□□ -1.2
ABP1YCR088W CAP2P13517 287 aa7.56□□□□□ -1.2
ABP1YCR088W TRM1P15565 570 aaKnown RBP7.56□□□□□ -1.2
ABP1YCR088W MDH1P17505 334 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
ABP1YCR088W SLM5P25345 492 aaKnown RBP7.56□□□□□ -1.2
ABP1YCR088W NDC1P32500 655 aa7.56□□□□□ -1.2
ABP1YCR088W PPQ1P32945 549 aa7.56□□□□□ -1.2
ABP1YCR088W VPS21P36017 210 aaKnown RBP7.56□□□□□ -1.2
ABP1YCR088W YJL218WP40892 196 aaKnown RBP7.56□□□□□ -1.2
ABP1YCR088W STE24P47154 453 aa7.56□□□□□ -1.2
ABP1YCR088W YJR149WP47177 404 aa7.56□□□□□ -1.2
ABP1YCR088W MDM34P53083 459 aa7.56□□□□□ -1.2
ABP1YCR088W YAT1P80235 687 aa7.56□□□□□ -1.2
ABP1YCR088W TRM8Q12009 286 aa7.56□□□□□ -1.2
ABP1YCR088W YTM1Q12024 460 aaPredicted RBP7.56□□□□□ -1.2
ABP1YCR088W HAL9Q12180 1030 aa7.56□□□□□ -1.2
ABP1YCR088W GTT2Q12390 233 aa7.56□□□□□ -1.2
ABP1YCR088W SIR1P21691 654 aa7.56□□□□□ -1.2
ABP1YCR088W PMT1P33775 817 aa7.56□□□□□ -1.2
ABP1YCR088W YPT52P36018 234 aaKnown RBP7.56□□□□□ -1.2
ABP1YCR088W MUM2P38236 366 aa7.56□□□□□ -1.2
ABP1YCR088W LRP1P38801 184 aaKnown RBP7.56□□□□□ -1.2
ABP1YCR088W SER33P40510 469 aa7.56□□□□□ -1.2
ABP1YCR088W QRI7P43122 407 aa7.56□□□□□ -1.2
ABP1YCR088W VEL1P53058 206 aa7.56□□□□□ -1.2
ABP1YCR088W YLR036CQ07986 203 aa7.56□□□□□ -1.2
ABP1YCR088W NMD4Q12129 218 aa7.56□□□□□ -1.2
ABP1YCR088W YBR298C-AQ8TGK4 73 aa7.56□□□□□ -1.2
ABP1YCR088W AI3P03877 415 aa7.55□□□□□ -1.2
ABP1YCR088W PET9P18239 318 aaKnown RBP7.55□□□□□ -1.2
ABP1YCR088W TAH1P25638 111 aaPredicted RBP7.55□□□□□ -1.2
ABP1YCR088W PET309P32522 965 aaPredicted RBP7.55□□□□□ -1.2
ABP1YCR088W TOD6P34219 525 aa7.55□□□□□ -1.2
ABP1YCR088W GLY1P37303 387 aaKnown RBP7.55□□□□□ -1.2
ABP1YCR088W SBE22P38814 852 aa7.55□□□□□ -1.2
ABP1YCR088W LSM5P40089 93 aaKnown RBP7.55□□□□□ -1.2
ABP1YCR088W YJR098CP47139 656 aa7.55□□□□□ -1.2
ABP1YCR088W MKC7P53379 596 aa7.55□□□□□ -1.2
ABP1YCR088W GOR1P53839 350 aa7.55□□□□□ -1.2
ABP1YCR088W CSL4P53859 292 aaPredicted RBP7.55□□□□□ -1.2
ABP1YCR088W SNZ1Q03148 297 aa7.55□□□□□ -1.2
ABP1YCR088W NGL2Q03264 515 aaKnown RBP7.55□□□□□ -1.2
ABP1YCR088W SWF1Q04629 336 aa7.55□□□□□ -1.2
ABP1YCR088W DCI1Q08558 271 aa7.55□□□□□ -1.2
ABP1YCR088W CLP1Q08685 445 aaPredicted RBP7.55□□□□□ -1.2
ABP1YCR088W TGL5Q12043 749 aa7.55□□□□□ -1.2
ABP1YCR088W YDR061WQ12298 539 aa7.55□□□□□ -1.2
ABP1YCR088W PHO84P25297 587 aaKnown RBP7.54□□□□□ -1.2
ABP1YCR088W OAC1P32332 324 aa7.54□□□□□ -1.2
ABP1YCR088W ASF2P32448 525 aaPredicted RBP7.54□□□□□ -1.2
ABP1YCR088W MSN2P33748 704 aa7.54□□□□□ -1.2
ABP1YCR088W DHR2P36009 735 aaPredicted RBP7.54□□□□□ -1.2
ABP1YCR088W YHR127WP38833 243 aaKnown RBP7.54□□□□□ -1.2
ABP1YCR088W TAT2P38967 592 aa7.54□□□□□ -1.2
ABP1YCR088W FAF1P40546 346 aaPredicted RBP7.54□□□□□ -1.2
ABP1YCR088W GCV1P48015 400 aa7.54□□□□□ -1.2
ABP1YCR088W FOL2P51601 243 aaKnown RBP7.54□□□□□ -1.2
ABP1YCR088W MPS2P53159 387 aa7.54□□□□□ -1.2
ABP1YCR088W YPL014WQ02606 381 aa7.54□□□□□ -1.2
ABP1YCR088W TRM82Q03774 444 aa7.54□□□□□ -1.2
ABP1YCR088W MRX4Q12467 430 aa7.54□□□□□ -1.2
ABP1YCR088W SLH1P53327 1967 aaKnown RBP7.54□□□□□ -1.2
ABP1YCR088W SAR1P20606 190 aaKnown RBP7.54□□□□□ -1.2
ABP1YCR088W EPT1P22140 391 aa7.54□□□□□ -1.2
ABP1YCR088W RPS1BP23248 255 aaKnown RBP7.54□□□□□ -1.2
ABP1YCR088W RRP7P25368 297 aaPredicted RBP7.54□□□□□ -1.2
ABP1YCR088W ATG22P25568 528 aa7.54□□□□□ -1.2
ABP1YCR088W KAP122P32767 1081 aa7.54□□□□□ -1.2
ABP1YCR088W YRO2P38079 344 aa7.54□□□□□ -1.2
ABP1YCR088W SOL3P38858 249 aa7.54□□□□□ -1.2
ABP1YCR088W YHR177WP38867 453 aa7.54□□□□□ -1.2
ABP1YCR088W CTF8P38877 133 aa7.54□□□□□ -1.2
ABP1YCR088W PFA3P42836 336 aa7.54□□□□□ -1.2
ABP1YCR088W VNX1P42839 908 aa7.54□□□□□ -1.2
ABP1YCR088W VPS73P53142 486 aaKnown RBP7.54□□□□□ -1.2
ABP1YCR088W SYF2P53277 215 aaPredicted RBP7.54□□□□□ -1.2
ABP1YCR088W TPS1Q00764 495 aaKnown RBP7.54□□□□□ -1.2
ABP1YCR088W YPL071CQ02864 156 aa7.54□□□□□ -1.2
ABP1YCR088W YMR034CQ05131 434 aaPredicted RBP7.54□□□□□ -1.2
ABP1YCR088W TEN1Q07921 160 aa7.54□□□□□ -1.2
ABP1YCR088W PLB3Q08108 686 aa7.54□□□□□ -1.2
ABP1YCR088W ATG29Q12092 213 aa7.54□□□□□ -1.2
ABP1YCR088W YPR1Q12458 312 aa7.54□□□□□ -1.2
ABP1YCR088W TFS1P14306 219 aa7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms