RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C BIT61P47041 543 aa6.58□□□□□ -1.36
TDP1YBR223C BIR1P47134 954 aa6.58□□□□□ -1.36
TDP1YBR223C ORM1P53224 222 aa6.58□□□□□ -1.36
TDP1YBR223C YGR168CP53293 376 aa6.58□□□□□ -1.36
TDP1YBR223C TUB4P53378 473 aa6.58□□□□□ -1.36
TDP1YBR223C CPR8P53728 308 aa6.58□□□□□ -1.36
TDP1YBR223C TGL2P54857 326 aa6.58□□□□□ -1.36
TDP1YBR223C TY2A-DR2Q03483 438 aa6.58□□□□□ -1.36
TDP1YBR223C TRM82Q03774 444 aa6.58□□□□□ -1.36
TDP1YBR223C GRX3Q03835 250 aa6.58□□□□□ -1.36
TDP1YBR223C TEN1Q07921 160 aa6.58□□□□□ -1.36
TDP1YBR223C ACF2Q12168 779 aa6.58□□□□□ -1.36
TDP1YBR223C NFI1Q12216 726 aa6.58□□□□□ -1.36
TDP1YBR223C TY2A-BQ12260 438 aa6.58□□□□□ -1.36
TDP1YBR223C TY2A-OR2Q12293 438 aa6.58□□□□□ -1.36
TDP1YBR223C TY2A-DR1Q12392 438 aa6.58□□□□□ -1.36
TDP1YBR223C TY2A-OR1Q12439 438 aa6.58□□□□□ -1.36
TDP1YBR223C MRX4Q12467 430 aa6.58□□□□□ -1.36
TDP1YBR223C TY2A-DR3Q99303 438 aa6.58□□□□□ -1.36
TDP1YBR223C ALG7P07286 448 aa6.57□□□□□ -1.36
TDP1YBR223C RPC40P07703 335 aaKnown RBP6.57□□□□□ -1.36
TDP1YBR223C RPS21AP0C0V8 87 aaKnown RBP6.57□□□□□ -1.36
TDP1YBR223C TRM1P15565 570 aaKnown RBP6.57□□□□□ -1.36
TDP1YBR223C THR1P17423 357 aaKnown RBP6.57□□□□□ -1.36
TDP1YBR223C PET9P18239 318 aaKnown RBP6.57□□□□□ -1.36
TDP1YBR223C BUD5P25300 642 aaPredicted RBP6.57□□□□□ -1.36
TDP1YBR223C URK1P27515 501 aa6.57□□□□□ -1.36
TDP1YBR223C IDH1P28834 360 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
TDP1YBR223C HIR2P32480 875 aa6.57□□□□□ -1.36
TDP1YBR223C PET127P32606 800 aa6.57□□□□□ -1.36
TDP1YBR223C LOT5P34234 306 aa6.57□□□□□ -1.36
TDP1YBR223C DCW1P36091 449 aa6.57□□□□□ -1.36
TDP1YBR223C VMA22P38784 181 aa6.57□□□□□ -1.36
TDP1YBR223C DOT6P40059 670 aaKnown RBP6.57□□□□□ -1.36
TDP1YBR223C AZF1P41696 914 aa6.57□□□□□ -1.36
TDP1YBR223C YNL034WP53963 612 aa6.57□□□□□ -1.36
TDP1YBR223C LEE1Q02799 301 aaKnown RBP6.57□□□□□ -1.36
TDP1YBR223C TMN2Q04562 672 aa6.57□□□□□ -1.36
TDP1YBR223C RNH1Q04740 348 aa6.57□□□□□ -1.36
TDP1YBR223C PUN1Q06991 263 aa6.57□□□□□ -1.36
TDP1YBR223C YTM1Q12024 460 aaPredicted RBP6.57□□□□□ -1.36
TDP1YBR223C DIN7Q12086 430 aa6.57□□□□□ -1.36
TDP1YBR223C RPL6BP05739 176 aaKnown RBP6.56□□□□□ -1.36
TDP1YBR223C HTS1P07263 546 aaKnown RBP6.56□□□□□ -1.36
TDP1YBR223C TFS1P14306 219 aa6.56□□□□□ -1.36
TDP1YBR223C VPS33P20795 691 aa6.56□□□□□ -1.36
TDP1YBR223C PTC6P25646 442 aa6.56□□□□□ -1.36
TDP1YBR223C CTS1P29029 562 aa6.56□□□□□ -1.36
TDP1YBR223C GUT1P32190 709 aa6.56□□□□□ -1.36
TDP1YBR223C ATG14P38270 344 aa6.56□□□□□ -1.36
TDP1YBR223C SBE22P38814 852 aa6.56□□□□□ -1.36
TDP1YBR223C YHR177WP38867 453 aa6.56□□□□□ -1.36
TDP1YBR223C GDI1P39958 451 aaKnown RBP6.56□□□□□ -1.36
TDP1YBR223C PCL6P40038 420 aa6.56□□□□□ -1.36
TDP1YBR223C YTA6P40328 754 aa6.56□□□□□ -1.36
TDP1YBR223C SER33P40510 469 aa6.56□□□□□ -1.36
TDP1YBR223C LSB6P42951 607 aa6.56□□□□□ -1.36
TDP1YBR223C STE24P47154 453 aa6.56□□□□□ -1.36
TDP1YBR223C JHD2P47156 728 aaPredicted RBP6.56□□□□□ -1.36
TDP1YBR223C PAC10P48363 199 aa6.56□□□□□ -1.36
TDP1YBR223C COS12P53053 380 aa6.56□□□□□ -1.36
TDP1YBR223C SDT1P53078 280 aa6.56□□□□□ -1.36
TDP1YBR223C YNR021WP53723 404 aaKnown RBP6.56□□□□□ -1.36
TDP1YBR223C SNZ1Q03148 297 aa6.56□□□□□ -1.36
TDP1YBR223C RIM13Q03792 727 aa6.56□□□□□ -1.36
TDP1YBR223C SIA1Q12212 622 aa6.56□□□□□ -1.36
TDP1YBR223C VPS13Q07878 3144 aa6.56□□□□□ -1.36
TDP1YBR223C HIP1P06775 603 aa6.55□□□□□ -1.36
TDP1YBR223C MDH1P17505 334 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
TDP1YBR223C MGM101P32787 269 aaKnown RBP6.55□□□□□ -1.36
TDP1YBR223C SAF1P38352 637 aa6.55□□□□□ -1.36
TDP1YBR223C IPI1P38803 334 aaPredicted RBP6.55□□□□□ -1.36
TDP1YBR223C CTF8P38877 133 aa6.55□□□□□ -1.36
TDP1YBR223C MDM31P38880 579 aa6.55□□□□□ -1.36
TDP1YBR223C GGC1P38988 300 aa6.55□□□□□ -1.36
TDP1YBR223C NTA1P40354 457 aa6.55□□□□□ -1.36
TDP1YBR223C QDR2P40474 542 aa6.55□□□□□ -1.36
TDP1YBR223C APQ12P40532 138 aa6.55□□□□□ -1.36
TDP1YBR223C SER2P42941 309 aa6.55□□□□□ -1.36
TDP1YBR223C HMS2P47175 358 aa6.55□□□□□ -1.36
TDP1YBR223C RPC11Q04307 110 aaPredicted RBP6.55□□□□□ -1.36
TDP1YBR223C YPS7Q06325 596 aa6.55□□□□□ -1.36
TDP1YBR223C NOP12Q08208 459 aaKnown RBP6.55□□□□□ -1.36
TDP1YBR223C DCI1Q08558 271 aa6.55□□□□□ -1.36
TDP1YBR223C HAL9Q12180 1030 aa6.55□□□□□ -1.36
TDP1YBR223C YBL113CQ7M4S9 792 aa6.55□□□□□ -1.36
TDP1YBR223C SIR3P06701 978 aa6.54□□□□□ -1.36
TDP1YBR223C PBS2P08018 668 aa6.54□□□□□ -1.36
TDP1YBR223C YKR104WP0CE69 306 aa6.54□□□□□ -1.36
TDP1YBR223C YSR3P23501 404 aa6.54□□□□□ -1.36
TDP1YBR223C YIM1P28625 365 aa6.54□□□□□ -1.36
TDP1YBR223C YKR023WP36119 530 aaKnown RBP6.54□□□□□ -1.36
TDP1YBR223C YHK8P38776 514 aa6.54□□□□□ -1.36
TDP1YBR223C BIG1P38813 335 aa6.54□□□□□ -1.36
TDP1YBR223C MIT1P40002 666 aa6.54□□□□□ -1.36
TDP1YBR223C SYG1P40528 902 aa6.54□□□□□ -1.36
TDP1YBR223C MRPS18P42847 217 aa6.54□□□□□ -1.36
TDP1YBR223C HXT16P47185 567 aa6.54□□□□□ -1.36
TDP1YBR223C ARO8P53090 500 aaKnown RBP6.54□□□□□ -1.36
TDP1YBR223C FIN1Q03898 291 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms