RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W BOL2P53082 120 aa4.74□□□□□ -1.65
CDC28YBR160W EFM5P53200 248 aaKnown RBP4.74□□□□□ -1.65
CDC28YBR160W MRPL50P53724 139 aa4.74□□□□□ -1.65
CDC28YBR160W CPR8P53728 308 aa4.74□□□□□ -1.65
CDC28YBR160W CEG1Q01159 459 aaPredicted RBP4.74□□□□□ -1.65
CDC28YBR160W PET117Q02771 107 aa4.74□□□□□ -1.65
CDC28YBR160W TRS31Q03337 283 aa4.74□□□□□ -1.65
CDC28YBR160W CWC21Q03375 135 aaKnown RBP4.74□□□□□ -1.65
CDC28YBR160W LRS4Q04087 347 aaKnown RBP4.74□□□□□ -1.65
CDC28YBR160W ECM11Q04110 302 aa4.74□□□□□ -1.65
CDC28YBR160W PPN1Q04119 674 aa4.74□□□□□ -1.65
CDC28YBR160W CDD1Q06549 142 aa4.74□□□□□ -1.65
CDC28YBR160W MCP2Q06567 569 aa4.74□□□□□ -1.65
CDC28YBR160W PUS9Q12069 462 aa4.74□□□□□ -1.65
CDC28YBR160W YLR049CQ12110 428 aa4.74□□□□□ -1.65
CDC28YBR160W NBP2Q12163 236 aa4.74□□□□□ -1.65
CDC28YBR160W YGK3Q12222 375 aaPredicted RBP4.74□□□□□ -1.65
CDC28YBR160W PST2Q12335 198 aaKnown RBP4.74□□□□□ -1.65
CDC28YBR160W RMD5Q12508 421 aa4.74□□□□□ -1.65
CDC28YBR160W ECM29P38737 1868 aa4.74□□□□□ -1.65
CDC28YBR160W CAP2P13517 287 aa4.73□□□□□ -1.65
CDC28YBR160W APE1P14904 514 aa4.73□□□□□ -1.65
CDC28YBR160W YCL002CP25565 263 aa4.73□□□□□ -1.65
CDC28YBR160W LRE1P25579 583 aaKnown RBP4.73□□□□□ -1.65
CDC28YBR160W GAC1P28006 793 aa4.73□□□□□ -1.65
CDC28YBR160W CDC5P32562 705 aa4.73□□□□□ -1.65
CDC28YBR160W PTM1P32857 523 aa4.73□□□□□ -1.65
CDC28YBR160W YHK8P38776 514 aa4.73□□□□□ -1.65
CDC28YBR160W IPI1P38803 334 aaPredicted RBP4.73□□□□□ -1.65
CDC28YBR160W MSS4P38994 779 aa4.73□□□□□ -1.65
CDC28YBR160W RPH1P39956 796 aa4.73□□□□□ -1.65
CDC28YBR160W YER137CP40083 148 aaKnown RBP4.73□□□□□ -1.65
CDC28YBR160W YER186CP40101 306 aa4.73□□□□□ -1.65
CDC28YBR160W FKH2P41813 862 aa4.73□□□□□ -1.65
CDC28YBR160W PET130P47065 347 aa4.73□□□□□ -1.65
CDC28YBR160W DIE2P50076 525 aa4.73□□□□□ -1.65
CDC28YBR160W STB4P50104 949 aa4.73□□□□□ -1.65
CDC28YBR160W UBC9P50623 157 aaPredicted RBP4.73□□□□□ -1.65
CDC28YBR160W YGR266WP53326 701 aa4.73□□□□□ -1.65
CDC28YBR160W RRN5Q02983 363 aa4.73□□□□□ -1.65
CDC28YBR160W DML1Q03652 475 aa4.73□□□□□ -1.65
CDC28YBR160W GRS2Q06817 618 aa4.73□□□□□ -1.65
CDC28YBR160W MFG1Q07684 458 aa4.73□□□□□ -1.65
CDC28YBR160W THP1Q08231 455 aa4.73□□□□□ -1.65
CDC28YBR160W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
CDC28YBR160W ATP16Q12165 160 aa4.73□□□□□ -1.65
CDC28YBR160W ACF2Q12168 779 aa4.73□□□□□ -1.65
CDC28YBR160W UBX3Q12229 455 aa4.73□□□□□ -1.65
CDC28YBR160W WTM1Q12363 437 aaKnown RBP4.73□□□□□ -1.65
CDC28YBR160W RTR2Q12378 196 aa4.73□□□□□ -1.65
CDC28YBR160W YPR1Q12458 312 aa4.73□□□□□ -1.65
CDC28YBR160W MPD2Q99316 277 aa4.73□□□□□ -1.65
CDC28YBR160W COX5AP00424 153 aa4.72□□□□□ -1.65
CDC28YBR160W HIS3P06633 220 aa4.72□□□□□ -1.65
CDC28YBR160W MIS1P09440 975 aaKnown RBP4.72□□□□□ -1.65
CDC28YBR160W SST2P11972 698 aaKnown RBP4.72□□□□□ -1.65
CDC28YBR160W YAP1P19880 650 aaKnown RBP4.72□□□□□ -1.65
CDC28YBR160W RPL24BP24000 155 aaKnown RBP4.72□□□□□ -1.65
CDC28YBR160W OCA4P25366 362 aa4.72□□□□□ -1.65
CDC28YBR160W RHB1P25378 209 aa4.72□□□□□ -1.65
CDC28YBR160W BEM1P29366 551 aa4.72□□□□□ -1.65
CDC28YBR160W NTG1P31378 399 aa4.72□□□□□ -1.65
CDC28YBR160W ASF2P32448 525 aaPredicted RBP4.72□□□□□ -1.65
CDC28YBR160W RPS0AP32905 252 aaKnown RBP4.72□□□□□ -1.65
CDC28YBR160W NAT2P37293 288 aa4.72□□□□□ -1.65
CDC28YBR160W YBR053CP38235 358 aa4.72□□□□□ -1.65
CDC28YBR160W YHR045WP38775 560 aa4.72□□□□□ -1.65
CDC28YBR160W CHS7P38843 316 aa4.72□□□□□ -1.65
CDC28YBR160W VMA7P39111 118 aa4.72□□□□□ -1.65
CDC28YBR160W ERV46P39727 415 aa4.72□□□□□ -1.65
CDC28YBR160W ISC1P40015 477 aaKnown RBP4.72□□□□□ -1.65
CDC28YBR160W RGI1P40043 161 aaPredicted RBP4.72□□□□□ -1.65
CDC28YBR160W ESL1P40456 1118 aa4.72□□□□□ -1.65
CDC28YBR160W SER2P42941 309 aa4.72□□□□□ -1.65
CDC28YBR160W PTR3P43606 678 aa4.72□□□□□ -1.65
CDC28YBR160W RET2P43621 546 aa4.72□□□□□ -1.65
CDC28YBR160W ROK1P45818 564 aaPredicted RBP4.72□□□□□ -1.65
CDC28YBR160W BIT61P47041 543 aa4.72□□□□□ -1.65
CDC28YBR160W RRT6P53117 311 aaPredicted RBP4.72□□□□□ -1.65
CDC28YBR160W NQM1P53228 333 aaPredicted RBP4.72□□□□□ -1.65
CDC28YBR160W SHY1P53266 389 aa4.72□□□□□ -1.65
CDC28YBR160W YGR168CP53293 376 aa4.72□□□□□ -1.65
CDC28YBR160W SUN4P53616 420 aa4.72□□□□□ -1.65
CDC28YBR160W YNL181WP53878 407 aa4.72□□□□□ -1.65
CDC28YBR160W INA17Q02888 182 aa4.72□□□□□ -1.65
CDC28YBR160W EFR3Q03653 782 aaKnown RBP4.72□□□□□ -1.65
CDC28YBR160W ARA2Q04212 335 aa4.72□□□□□ -1.65
CDC28YBR160W YMR111CQ04461 462 aaPredicted RBP4.72□□□□□ -1.65
CDC28YBR160W YDR124WQ04608 324 aa4.72□□□□□ -1.65
CDC28YBR160W DBP9Q06218 594 aaKnown RBP4.72□□□□□ -1.65
CDC28YBR160W RAX1Q08760 435 aa4.72□□□□□ -1.65
CDC28YBR160W PGC1Q08959 321 aa4.72□□□□□ -1.65
CDC28YBR160W NUS1Q12063 375 aa4.72□□□□□ -1.65
CDC28YBR160W YOR022CQ12204 715 aa4.72□□□□□ -1.65
CDC28YBR160W RBD2Q12270 262 aa4.72□□□□□ -1.65
CDC28YBR160W PNS1Q12412 539 aa4.72□□□□□ -1.65
CDC28YBR160W HXK2P04807 486 aaKnown RBP4.71□□□□□ -1.66
CDC28YBR160W ARG81P05085 880 aa4.71□□□□□ -1.66
CDC28YBR160W SPT3P06844 337 aa4.71□□□□□ -1.66
CDC28YBR160W SEC53P07283 254 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms