RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C ARK1P53974 638 aa2.13□□□□□ -2.07
SPC72YAL047C PDS5Q04264 1277 aa2.13□□□□□ -2.07
SPC72YAL047C THP3Q12049 470 aaKnown RBP2.13□□□□□ -2.07
SPC72YAL047C MDH1P17505 334 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
SPC72YAL047C PPH22P23595 377 aa2.12□□□□□ -2.07
SPC72YAL047C CPR4P25334 318 aa2.12□□□□□ -2.07
SPC72YAL047C YCR100CP25606 316 aa2.12□□□□□ -2.07
SPC72YAL047C TFB1P32776 642 aa2.12□□□□□ -2.07
SPC72YAL047C MDL1P33310 695 aa2.12□□□□□ -2.07
SPC72YAL047C SEC66P33754 206 aa2.12□□□□□ -2.07
SPC72YAL047C RRT2P38332 387 aa2.12□□□□□ -2.07
SPC72YAL047C PTH1P38876 190 aaKnown RBP2.12□□□□□ -2.07
SPC72YAL047C YJL055WP47044 245 aa2.12□□□□□ -2.07
SPC72YAL047C MNP1P53163 194 aaPredicted RBP2.12□□□□□ -2.07
SPC72YAL047C OAZ1Q02803 292 aa2.12□□□□□ -2.07
SPC72YAL047C YDR286CQ05530 114 aa2.12□□□□□ -2.07
SPC72YAL047C YLR108CQ12259 485 aa2.12□□□□□ -2.07
SPC72YAL047C YDL007C-AQ2V2Q0 85 aa2.12□□□□□ -2.07
SPC72YAL047C ADE6P38972 1358 aaKnown RBP2.12□□□□□ -2.07
SPC72YAL047C YPR117WQ06116 2489 aa2.12□□□□□ -2.07
SPC72YAL047C CHS1P08004 1131 aa2.11□□□□□ -2.07
SPC72YAL047C RPL31BP0C2H9 113 aaKnown RBP2.11□□□□□ -2.07
SPC72YAL047C SDH3P33421 198 aa2.11□□□□□ -2.07
SPC72YAL047C SYG1P40528 902 aa2.11□□□□□ -2.07
SPC72YAL047C VMA13P41807 478 aaKnown RBP2.11□□□□□ -2.07
SPC72YAL047C GCD10P41814 478 aa2.11□□□□□ -2.07
SPC72YAL047C DLD2P46681 530 aaKnown RBP2.11□□□□□ -2.07
SPC72YAL047C GOR1P53839 350 aa2.11□□□□□ -2.07
SPC72YAL047C PNG1Q02890 363 aa2.11□□□□□ -2.07
SPC72YAL047C SOV1Q04748 898 aa2.11□□□□□ -2.07
SPC72YAL047C TSR1Q07381 788 aaKnown RBP2.11□□□□□ -2.07
SPC72YAL047C MUM3Q08750 479 aa2.11□□□□□ -2.07
SPC72YAL047C SLM3Q12093 417 aa2.11□□□□□ -2.07
SPC72YAL047C ERV2Q12284 196 aa2.11□□□□□ -2.07
SPC72YAL047C GPM3Q12326 303 aa2.11□□□□□ -2.07
SPC72YAL047C SEC39Q12745 709 aa2.11□□□□□ -2.07
SPC72YAL047C NUM1Q00402 2748 aa2.11□□□□□ -2.07
SPC72YAL047C SAM1P10659 382 aaKnown RBP2.11□□□□□ -2.07
SPC72YAL047C SAM2P19358 384 aaKnown RBP2.11□□□□□ -2.07
SPC72YAL047C RRP7P25368 297 aaPredicted RBP2.11□□□□□ -2.07
SPC72YAL047C REC114P32841 428 aa2.11□□□□□ -2.07
SPC72YAL047C CAJ1P39101 391 aa2.11□□□□□ -2.07
SPC72YAL047C GDI1P39958 451 aaKnown RBP2.11□□□□□ -2.07
SPC72YAL047C SEC28P40509 296 aaKnown RBP2.11□□□□□ -2.07
SPC72YAL047C EFM4P40516 257 aa2.11□□□□□ -2.07
SPC72YAL047C CAK1P43568 368 aaPredicted RBP2.11□□□□□ -2.07
SPC72YAL047C PEX25Q02969 394 aa2.11□□□□□ -2.07
SPC72YAL047C ODC1Q03028 310 aa2.11□□□□□ -2.07
SPC72YAL047C VTA1Q06263 330 aa2.11□□□□□ -2.07
SPC72YAL047C SIL1Q08199 421 aa2.11□□□□□ -2.07
SPC72YAL047C TMC1Q08422 150 aaPredicted RBP2.11□□□□□ -2.07
SPC72YAL047C RRG7Q08774 242 aaPredicted RBP2.11□□□□□ -2.07
SPC72YAL047C TPM1P17536 199 aaKnown RBP2.1□□□□□ -2.07
SPC72YAL047C YIM1P28625 365 aa2.1□□□□□ -2.07
SPC72YAL047C RML2P32611 393 aa2.1□□□□□ -2.07
SPC72YAL047C ANP1P32629 500 aa2.1□□□□□ -2.07
SPC72YAL047C TOA1P32773 286 aa2.1□□□□□ -2.07
SPC72YAL047C YIL089WP40500 205 aa2.1□□□□□ -2.07
SPC72YAL047C RRT5P43607 289 aa2.1□□□□□ -2.07
SPC72YAL047C ATP22P50273 684 aaPredicted RBP2.1□□□□□ -2.07
SPC72YAL047C YGL108CP53139 140 aa2.1□□□□□ -2.07
SPC72YAL047C YGL039WP53183 348 aaKnown RBP2.1□□□□□ -2.07
SPC72YAL047C TOF1P53840 1238 aa2.1□□□□□ -2.07
SPC72YAL047C MEH1Q02205 184 aa2.1□□□□□ -2.07
SPC72YAL047C KAP120Q02932 1032 aa2.1□□□□□ -2.07
SPC72YAL047C SPE3Q12074 293 aaKnown RBP2.1□□□□□ -2.07
SPC72YAL047C CPR2P23285 205 aa2.09□□□□□ -2.07
SPC72YAL047C SNT1P25357 1226 aa2.09□□□□□ -2.07
SPC72YAL047C YME2P32843 850 aa2.09□□□□□ -2.07
SPC72YAL047C HCS1P34243 683 aa2.09□□□□□ -2.07
SPC72YAL047C SHC1P39000 512 aa2.09□□□□□ -2.07
SPC72YAL047C NCA3P46955 337 aa2.09□□□□□ -2.07
SPC72YAL047C SSN8P47821 323 aa2.09□□□□□ -2.07
SPC72YAL047C NCS2P53923 493 aaPredicted RBP2.09□□□□□ -2.07
SPC72YAL047C KTR5P53966 522 aaPredicted RBP2.09□□□□□ -2.07
SPC72YAL047C VPS9P54787 451 aa2.09□□□□□ -2.07
SPC72YAL047C MRP51Q02950 344 aa2.09□□□□□ -2.07
SPC72YAL047C TAP42Q04372 366 aa2.09□□□□□ -2.07
SPC72YAL047C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
SPC72YAL047C CUE5Q08412 411 aaKnown RBP2.09□□□□□ -2.07
SPC72YAL047C SMF3Q12078 473 aaPredicted RBP2.09□□□□□ -2.07
SPC72YAL047C TMS1Q12116 473 aa2.09□□□□□ -2.07
SPC72YAL047C APC1P53886 1748 aa2.09□□□□□ -2.07
SPC72YAL047C TY4B-HP0C2J7 1802 aa2.09□□□□□ -2.07
SPC72YAL047C TY4B-JP47024 1803 aa2.09□□□□□ -2.07
SPC72YAL047C RHO2P06781 192 aa2.09□□□□□ -2.08
SPC72YAL047C CLN3P13365 580 aa2.09□□□□□ -2.08
SPC72YAL047C PET123P17558 318 aa2.09□□□□□ -2.08
SPC72YAL047C SPB1P25582 841 aaPredicted RBP2.09□□□□□ -2.08
SPC72YAL047C IDH2P28241 369 aaKnown RBP2.09□□□□□ -2.08
SPC72YAL047C AFG1P32317 509 aa2.09□□□□□ -2.08
SPC72YAL047C YCR041WP37265 110 aa2.09□□□□□ -2.08
SPC72YAL047C SLM4P38247 162 aa2.09□□□□□ -2.08
SPC72YAL047C YHR054CP38780 354 aa2.09□□□□□ -2.08
SPC72YAL047C KEL1P38853 1164 aaKnown RBP2.09□□□□□ -2.08
SPC72YAL047C OST1P41543 476 aaKnown RBP2.09□□□□□ -2.08
SPC72YAL047C BUD27P43573 796 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
SPC72YAL047C DSL1P53847 754 aa2.09□□□□□ -2.08
SPC72YAL047C SLG1P54867 378 aa2.09□□□□□ -2.08
SPC72YAL047C PGC1Q08959 321 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms